prot_L-elsbetiae_contig9323.18324.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9323.18324.1
Unique Nameprot_L-elsbetiae_contig9323.18324.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length361
Homology
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BLAST of mRNA_L-elsbetiae_contig9323.18324.1 vs. uniprot
Match: A0A6H5L576_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L576_9PHAE)

HSP 1 Score: 562 bits (1449), Expect = 1.890e-195
Identity = 292/405 (72.10%), Postives = 325/405 (80.25%), Query Frame = 0 
Query:    1 MSTAWTKGDRKARRQLEKALKSDETDNVTRFALVRLLANKAEPVAAEELLRVPGIEDKMLADPTTRVDILTSLGGAYLMLWRARGATTSGNNRS-GGNGQGRDTTLGVVEIRLDVSSDRMDLLHRAQHFLQEALTAPEKMNDPALRAQV-------------------------------------------AFCKEARGDCKEALALYASIISDSALSPGISNVIFRTSVLLAYVGRLDECVRYLEFIEGQPPKGCSTLLVQALLYTCFVSMGLEMKASRRLETVREAFNEEYTAGRMGVGFSRDEIPWDRLPGWFHMWRELGVHSLRGGDYYAGIQMFSQATLQREDAETMVCTGEMLWVLGDAKRALTLCERAYAADPLHTGAKKRLSGWAPEKWKERIAKE 361
            MS AWTKGD +A++QLEK+L SD+ D+VTRFALVRLLA+KAEP AAEELLR PG+ED++LADP TRV +L+SLGGAYLMLWRARG TTS +  S  G GQG+DT   VVEIRLDVSS+R DLLHRAQHFL+EAL +PE +NDPA+RAQV                                           AFCKEARGD KEAL LYASIISDSALSPG S VIFRTSVLLAYVGRLDECVRYLEFIEGQPPKGCS LLVQALLYTC+VS+GLE+K SRRL T+REA+N+EYTAGRMG GFSRDEIPWDRLPGWF+MWRELGV S+R G+YYAGIQMFSQATLQR+D ETMVCT EMLWVLG+ KRAL LCERAYAADPLH GA++RLSGWAP+KWKERI KE
Sbjct:    1 MSLAWTKGDWRAKKQLEKSLSSDQDDHVTRFALVRLLASKAEPAAAEELLRGPGVEDRLLADPNTRVAMLSSLGGAYLMLWRARGETTSESTGSRAGGGQGKDTRE-VVEIRLDVSSERTDLLHRAQHFLEEALMSPENLNDPAIRAQVGERGKWKSVLRLPGLARLPPSRLSLFRPDIRSLLHPDCCAFKKAFCKEARGDYKEALTLYASIISDSALSPGASAVIFRTSVLLAYVGRLDECVRYLEFIEGQPPKGCSMLLVQALLYTCYVSLGLEVKVSRRLITLREAYNDEYTAGRMGRGFSRDEIPWDRLPGWFYMWRELGVESIRAGNYYAGIQMFSQATLQRQDPETMVCTAEMLWVLGEPKRALALCERAYAADPLHIGAQRRLSGWAPQKWKERIVKE 404
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9323.18324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L576_9PHAE1.890e-19572.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 267..358
e-value: 4.7E-5
score: 25.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 270..342

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9323contigL-elsbetiae_contig9323:213..3375 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9323.18324.1mRNA_L-elsbetiae_contig9323.18324.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9323 213..3375 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9323.18324.1 ID=prot_L-elsbetiae_contig9323.18324.1|Name=mRNA_L-elsbetiae_contig9323.18324.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=361bp
MSTAWTKGDRKARRQLEKALKSDETDNVTRFALVRLLANKAEPVAAEELL
RVPGIEDKMLADPTTRVDILTSLGGAYLMLWRARGATTSGNNRSGGNGQG
RDTTLGVVEIRLDVSSDRMDLLHRAQHFLQEALTAPEKMNDPALRAQVAF
CKEARGDCKEALALYASIISDSALSPGISNVIFRTSVLLAYVGRLDECVR
YLEFIEGQPPKGCSTLLVQALLYTCFVSMGLEMKASRRLETVREAFNEEY
TAGRMGVGFSRDEIPWDRLPGWFHMWRELGVHSLRGGDYYAGIQMFSQAT
LQREDAETMVCTGEMLWVLGDAKRALTLCERAYAADPLHTGAKKRLSGWA
PEKWKERIAKE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf