prot_L-elsbetiae_contig9307.18307.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9307.18307.1
Unique Nameprot_L-elsbetiae_contig9307.18307.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length135
Homology
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BLAST of mRNA_L-elsbetiae_contig9307.18307.1 vs. uniprot
Match: A0A6H5K6H4_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H4_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 2.300e-25
Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 0 
Query:    9 IRGCILYFFRFMAYGSVGPFKALIWRSKGLSEHQVGVLGAINPVASFFWTPVACAFADRHNIQQQVM 75
            +  C+LYFF FMA+G V PF  LIWRSKGLSEHQVG+LGAI PVASFF  PV CAFADRH+I QQV+
Sbjct:    7 VMACVLYFFLFMAHGCVAPFMPLIWRSKGLSEHQVGILGAIRPVASFFVNPVMCAFADRHSIHQQVV 73
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BLAST of mRNA_L-elsbetiae_contig9307.18307.1 vs. uniprot
Match: D7G3W1_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W1_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 1.440e-15
Identity = 38/46 (82.61%), Postives = 40/46 (86.96%), Query Frame = 0 
Query:   31 LIWRSKGLSEHQVGVLGAINPVASFFWTPVACAFADRHNIQQQVMR 76
            LIWRSKGLSEHQVG+LGAI PVASFF TPV CAFADRH+I QQ  R
Sbjct:    3 LIWRSKGLSEHQVGILGAIRPVASFFVTPVMCAFADRHSIHQQRWR 48
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BLAST of mRNA_L-elsbetiae_contig9307.18307.1 vs. uniprot
Match: D7G4M5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M5_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 3.200e-13
Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 0 
Query:    1 MEPSSSSHIRGCILYFFRFMAYGSVGPFKALIWRSKGLSEHQVGVLGAINPVASFFWTPVACAFADRHNIQQ 72
            +  +  S + GC LYFF FM+ GSV PF  +IWRSK LSE +VG+L A+ P+A     PV C+   ++ +QQ
Sbjct:    3 VPSTGGSRLPGCALYFFLFMSLGSVMPFVPVIWRSKRLSETEVGLLAAVRPIALLLAGPVICSLIGKYGVQQ 74
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BLAST of mRNA_L-elsbetiae_contig9307.18307.1 vs. uniprot
Match: A0A6H5JEM5_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM5_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 5.750e-12
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 0 
Query:   40 EHQVGVLGAINPVASFFWTPVACAFADRHNIQQQVM 75
            E  VG+LGAINPVASFFWTPVACAFADRHNIQQQV+
Sbjct:    7 ESIVGLLGAINPVASFFWTPVACAFADRHNIQQQVV 42
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9307.18307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K6H4_9PHAE2.300e-2573.13MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
D7G3W1_ECTSI1.440e-1582.61MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4M5_ECTSI3.200e-1345.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEM5_9PHAE5.750e-1288.89MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 7..101
e-value: 6.6E-7
score: 30.9
NoneNo IPR availablePANTHERPTHR16172UNCHARACTERIZEDcoord: 13..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 43..65
NoneNo IPR availableTMHMMTMhelixcoord: 13..33
IPR024989Major facilitator superfamily associated domainPFAMPF12832MFS_1_likecoord: 12..127
e-value: 7.6E-11
score: 41.5
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 11..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9307contigL-elsbetiae_contig9307:5503..7214 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9307.18307.1mRNA_L-elsbetiae_contig9307.18307.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9307 4542..7233 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9307.18307.1 ID=prot_L-elsbetiae_contig9307.18307.1|Name=mRNA_L-elsbetiae_contig9307.18307.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=135bp
MEPSSSSHIRGCILYFFRFMAYGSVGPFKALIWRSKGLSEHQVGVLGAIN
PVASFFWTPVACAFADRHNIQQQVMRFPLPFVHYFFSFYATHSWSSTTSK
PAPITLNRRHNREKRAMQVSRAREYDKSLGKSGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024989MFS_assoc_dom
IPR036259MFS_trans_sf