prot_L-elsbetiae_contig930.18299.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig930.18299.1
Unique Nameprot_L-elsbetiae_contig930.18299.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length120
Homology
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BLAST of mRNA_L-elsbetiae_contig930.18299.1 vs. uniprot
Match: D7FRQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ3_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 2.280e-54
Identity = 95/119 (79.83%), Postives = 103/119 (86.55%), Query Frame = 0 
Query:    1 MSRLLNPIGAASAAMRTPARRRVVQKVLENASKPVCEREFMMLMNTLPEGLSDTQNRAKMEAFQAAQKSLDEAMQKAAAHRGQNYVTYRMKQLSEVAATKKRRRRNGIGRGRFNLTRVF 119
            MSR LNPIGAASAAMRTPARRRVVQKVL++AS  VCEREFMMLMN LPE + DT+  AKME  + AQKSL  A QKAAAHRGQ+YVT+RMKQLS VAATKKRRRRNGIGRGRFNL RV+
Sbjct:    1 MSRFLNPIGAASAAMRTPARRRVVQKVLDHASTAVCEREFMMLMNALPEDVEDTKAPAKMETLRTAQKSLQVATQKAAAHRGQDYVTFRMKQLSGVAATKKRRRRNGIGRGRFNLARVY 119
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig930.18299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRQ3_ECTSI2.280e-5479.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig930contigL-elsbetiae_contig930:10139..13884 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig930.18299.1mRNA_L-elsbetiae_contig930.18299.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig930 10139..13884 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig930.18299.1 ID=prot_L-elsbetiae_contig930.18299.1|Name=mRNA_L-elsbetiae_contig930.18299.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=120bp
MSRLLNPIGAASAAMRTPARRRVVQKVLENASKPVCEREFMMLMNTLPEG
LSDTQNRAKMEAFQAAQKSLDEAMQKAAAHRGQNYVTYRMKQLSEVAATK
KRRRRNGIGRGRFNLTRVF*
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