prot_L-elsbetiae_contig9230.18250.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9230.18250.1
Unique Nameprot_L-elsbetiae_contig9230.18250.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length243
Homology
BLAST of mRNA_L-elsbetiae_contig9230.18250.1 vs. uniprot
Match: A0A6H5KVH9_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVH9_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 1.030e-116
Identity = 183/241 (75.93%), Postives = 203/241 (84.23%), Query Frame = 0
Query:    1 MATGDVKYWDNSYGKTLDDLEVFVGTVESVDGSTRESAISEASNSLKRLAGMRRSYNLEIKLLKDPASKAHYNLEKSQKDARFMTLQARFEAAKESGQSKRDQLFGGRRDVESGGAAERSAEAKLDEADQYQDKTEEAYKNMIGVLKETEQTADGTAVELTNQREQLGRITEDAINIDSMLTRADRLVKVFSKRMMTDKFIQCFGCLNIVAMLAIIIYVIANNVDL-GGDSEDPPPGPAGT 240
            MA+GDVKYWD SYGKTLD L+ F+ T+ES  G  RE A+SEAS SLKRLAGMRRSYNLEIKL+KDP  KAHYNLEKSQKD+R+ TLQ+RF+AAK SG S RD+LFGGRRDVESG A  +SAEAKL EADQYQDKTE AYKNMIGVL+ETE TAD TAVELTNQREQL RITED   IDS+LTRADRLVKVFSKRMMTDKFIQCFGCLN+ AM+AII+YV+   V+L GGD  D P   AG+
Sbjct:    1 MASGDVKYWDTSYGKTLDQLDGFIATMESGSGDAREDAMSEASRSLKRLAGMRRSYNLEIKLIKDPNMKAHYNLEKSQKDSRYATLQSRFDAAKASGDSTRDELFGGRRDVESGEAQGKSAEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVELPGGDDNDVPDPAAGS 241          
BLAST of mRNA_L-elsbetiae_contig9230.18250.1 vs. uniprot
Match: A0A835Z1V1_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V1_9STRA)

HSP 1 Score: 192 bits (489), Expect = 6.760e-58
Identity = 110/232 (47.41%), Postives = 153/232 (65.95%), Query Frame = 0
Query:    4 GDVKYWDNSYGKTLDDLEVFVGTVESVDGSTRESAISEASNSLKRLAGMRRSYNLEIKLLKDPASKAHYNLEKSQKDARFMTLQARFEAAKES-GQSKRDQLFGGRRDVESGGAAE----RSAEAKLDEADQYQDKTEEAYKNMIGVLKETEQTADGTAVELTNQREQLGRITEDAINIDSMLTRADRLVKVFSKRMMTDKFIQCFGCLNIVAMLAIIIYVIANNVDLGGDS 230
            GDVKYWD SYGK LD+L   V  V+    + +E+ I+ A+ +++RL GM+RSYNLEIKL++D   KA Y  EK+ KDA+   L+A+ E AK     S +  LF GR       AAE    ++A+ KLD+A+  Q+KTE  YKN+I VL++TE+    TA  L  QR Q+  ITE+ + +D MLTRA++L+ VFS+R+ TDK IQCF  +N+ A++AII+YV+  NV L G S
Sbjct:    2 GDVKYWDTSYGKALDELSDQVKAVKGASAAEKEAKIATATQTVRRLQGMKRSYNLEIKLMRDATQKASYQEEKNAKDAKLTELEAQLEEAKNKPAGSDKVSLFSGR-------AAEEPKVKTADQKLDQAEIIQNKTEAKYKNIITVLEQTEEVGSATAATLQEQRAQISEITENVMEMDGMLTRANKLIMVFSRRLATDKMIQCFAFINVAALVAIIVYVVIKNVGLPGSS 226          
BLAST of mRNA_L-elsbetiae_contig9230.18250.1 vs. uniprot
Match: A0A835Z325_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z325_9STRA)

HSP 1 Score: 164 bits (416), Expect = 6.310e-47
Identity = 105/239 (43.93%), Postives = 146/239 (61.09%), Query Frame = 0
Query:    4 GDVKYWDNSYGKTLDDLEVFVGTV-ESVDGSTRESAISEASNSLKRLAGMRRSYNLEIKLLKDPASKAHYNLEKSQKDARFMTLQARFEAA--KESGQSKRDQLFGGRRDVESGGAAERSAEAKLDEADQYQDKTEEAYKNMIGVLKETEQTADGTAVELTNQREQLGRITEDAINIDSMLTRADRLVKVFSKRMMTDKFIQCFGCLNIVAMLAIIIYVIANNVDLGGD-SEDPPPGPA 238
            GD+++WD +YG  LD LE  +  V E+   S R+   S A+++++RL G++RSYNLEIKL +D   KA Y   K+ KDAR   L+A+ E A  K   +++R  LF GR  +E   AA+    AKLD+A   QDKTE  YKNM+ VL +TE+     A  L +QR Q+  I ED   +   LTRA +L+ VF KR+ TDKFIQCFG +N+  ++ II+YV+     L    + +PPP PA
Sbjct:    2 GDLQFWDGNYGNVLDGLESQLHQVREAYTPSDRDQLASTAASTVRRLQGIKRSYNLEIKLTRDTGLKAMYTDAKAAKDARLEQLEAQLEEARRKPGREAERAALFDGRA-IEMAPAAD----AKLDQASAIQDKTEARYKNMVTVLAQTEEIGTAAAASLADQRTQMVAIDEDVKVMHENLTRAGKLLHVFGKRLATDKFIQCFGFVNVALLVGIILYVVITKTGLSSSGASNPPPTPA 235          
BLAST of mRNA_L-elsbetiae_contig9230.18250.1 vs. uniprot
Match: A0A7S2V573_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V573_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.540e-27
Identity = 78/235 (33.19%), Postives = 124/235 (52.77%), Query Frame = 0
Query:    6 VKYWDNSYGKTLDDLEVFVGTVESVDGSTRESAISEASNSLKRLAGMRRSYNLEIKLLKDPASKAHYNLEKSQKDARFMTLQARFEAAKESGQSKRDQLFGGRRDVESGGA---AERSAEAKLDEADQYQDKTEEAYKNMIGVLKETEQTADGTAVELTNQREQLGRITEDAINIDSMLTRADRLVKVFSKRMMTDKFIQCFGCLNIVAMLAIIIYVIANNVDLGGDSEDPPPGP 237
            ++YWD      +D  E     ++ +D  T   A  E  + L+   G+++S+  E++LL D   + HY ++  + + R   L  R   ++E+   +++ L  G +    GG    ++   +A L +A++ QD  E+AY      L E  Q A  T  EL NQRE++  ITE A  ID +LTRADRL++ F +RM TD+ IQ F  +N   +LA+IIY I ++ +L G S    P P
Sbjct:    1 MEYWDERINSLIDQGEREAEKLD-MDNETAMEACQEIEHCLQSAKGVKQSFTTELRLLGDKVEEQHYKMKLRRYEERMSALTERLNGSREA--IEKEHLMRGAQQRRGGGGFGDSDDPNDAMLGKAEKLQDDIEDAYGRAENDLDEIRQLAPETLAELRNQREKIQDITETAERIDDLLTRADRLLRTFGRRMATDRLIQVFFFINACLLLAVIIYAIVSDSNLTGGSGSKAPDP 232          
BLAST of mRNA_L-elsbetiae_contig9230.18250.1 vs. uniprot
Match: A0A7S4A3K9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3K9_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.370e-26
Identity = 79/242 (32.64%), Postives = 132/242 (54.55%), Query Frame = 0
Query:    1 MATGDVKYWDNSYGKTLDDLEVFVGTVESVDGSTRESAISEASNSLKRLAGMRRSYNLEIKLLKDPASKAHYNLEKSQKDARFMTLQARFEAAKESGQSKRDQLFGGRRDVESGGAAERSAEAKLDEADQYQDKTEEAYKNMIGVLKETEQTADGTAVELTNQREQLGRITEDAINIDSMLTRADRLVKVFSKRMMTDKFIQCFGCLNIVAMLAIIIYVIANNVDLGGDSE-DPPPGPAGTE 241
            M+T D+ YW +SY  ++DD +  V ++ + +   R S I  A   LKR  G+++SY LE++LL+D   K +Y     + D R   L+ R E  +E  +++R  L    ++  +     +  +  LD+A   QDKTE   +    +++ +++    T  EL  Q++Q+  ++ D + I+  L+RADRL++ F+KRMMTDK I  F  LN+ A+  II+Y +     LG D + D   GP  +E
Sbjct:   59 MST-DIDYWSDSYRSSIDDADRLVTSLGACEPDERLSIIDAADAKLKRAGGIKKSYKLELRLLRDRELKRNYEESLRELDDRRDELKRRVEEHRE--RTERSTLL---QETPAAFGEHKGNDYYLDKAHSLQDKTENTLERTTQMIEASKEVGASTLSELERQQDQIKDVSADIMLIEDNLSRADRLIRNFTKRMMTDKLIMGFAFLNMCALTGIIVYCVVTGKVLGDDKKKDKEEGPDESE 294          
BLAST of mRNA_L-elsbetiae_contig9230.18250.1 vs. uniprot
Match: W7TW41_9STRA (Soluble nsf attachment protein receptor n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW41_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.470e-26
Identity = 73/241 (30.29%), Postives = 128/241 (53.11%), Query Frame = 0
Query:    5 DVKYWDNSYGKTLDDLEVFVGTVESVDGSTRESAISEASNSLKRLAGMRRSYNLEIKL-LKDPASKAHYNLEKSQKDARFMTLQARFEAAKESGQSKRDQLFGGRRDVESGGAAERSA--EAKLDEADQYQDKTEEAYKNMIGVLKETEQTADGTAVELTNQREQLGRITEDAINIDSMLTRADRLVKVFSKRMMTDKFIQCFGCLNIVAMLAIIIYVIANNVDLGGDSEDPPPGPAGTEV 242
            D++YWD      L +LE  +G ++S+ G  +E+ I+++  +LKR+  +++ YN E+++ LK+   +  Y  +    D R   L+   + AK     K   LF G +  +  G    +A  +  L EA + QDKTE + ++ +G+++ ++Q    T  E+  Q+EQ+  IT+    ++  LTRAD+L++ F +R+ TDKFIQ F  LN   ++ II++       +       PP P   EV
Sbjct:    3 DIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKTEANKK--SLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVRAPEIHAPPMPTFDEV 241          
BLAST of mRNA_L-elsbetiae_contig9230.18250.1 vs. uniprot
Match: A0A7S1FMQ8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMQ8_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.230e-25
Identity = 70/220 (31.82%), Postives = 119/220 (54.09%), Query Frame = 0
Query:    4 GDVKYWDNSYGKTLDDLEVFVGTVESVDGS---TRESAISEASNSLKRLAGMRRSYNLEIKLLKD-PASKAHYNLEKSQKDARFMTLQARFEAAKESGQSKRDQLFGGRRDVESGGAAERSAEAKLDEADQYQDKTEEAYKNMIGVLKETEQTADGTAVELTNQREQLGRITEDAINIDSMLTRADRLVKVFSKRMMTDKFIQCFGCLNIVAMLAIIIYV 219
            GD++YW +S+   L  L   +  ++ V        +SAI  A + LK+ + +++SY LE++L+   P  K  Y  +  + +        + + AK   Q  R +L  G  +   G   ER  +  L EA + QDKT+E+      ++ E+++    T  EL  QR Q+ R+T+D + I+  L RA++L+K F +RM TDKFIQCF C+NI+ +L ++ ++
Sbjct:    2 GDIEYWRDSFQSELSTLPEIIRDIDRVRKKGPYAIQSAIRNAEDQLKKCSNIQKSYKLELRLMVGMPVEKKKYENDLQELENELRECNDKLDDAKARAQ--RSELMSGANNE--GPDPERDGDQMLMEAGKIQDKTKESLMTTQNLIHESKEVGVTTLEELNRQRNQIVRVTDDVMAIEGELARAEKLIKTFGRRMATDKFIQCFTCVNILLLLGVVCFI 217          
BLAST of mRNA_L-elsbetiae_contig9230.18250.1 vs. uniprot
Match: B8BZJ7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZJ7_THAPS)

HSP 1 Score: 108 bits (270), Expect = 3.110e-25
Identity = 69/213 (32.39%), Postives = 113/213 (53.05%), Query Frame = 0
Query:   35 RESAISEASNSLKRLAGMRRSYNLEIKLLKDPASKAHYNLEKSQKDARFMTLQARFEAAKESGQSKRDQLFGGRRDVESGG-------AAERSAEAKLDEADQYQDKTEEAYKNMIGVLKETEQTADGTAVELTNQREQLGRITEDAINIDSMLTRADRLVKVFSKRMMTDKFIQCFGCLNIVAMLAIIIYVIANNVDL-GGDSEDPPPGPAG 239
            + S +  A   L+   G ++SY +E +L+ DP  K  Y  + S+      +     +A K  G  +R +LF G R   S G       + E + ++ L + +  QDKT+ +  N   ++  +++  + T  EL  QREQ+  +  +A+ I+  L RAD+L+K F KRM TD+FIQCF C+NI+ ++ ++IY I     L GG++E  P  P G
Sbjct:    3 KASTLDRAEKKLRAANGTKKSYKMETRLVADPNQKRMYENKLSRLSEELSSCANDLKAMK--GGMQRGELFVGARGKSSRGGGEYGEMSGEEAGDSMLSDMNNIQDKTKNSLANTKHMVAASKEVGEATMEELLRQREQIRNVDNEAMRIEDNLQRADKLIKTFGKRMATDRFIQCFACINILLLVGVVIYTILKKGSLTGGENEGAPASPVG 213          
BLAST of mRNA_L-elsbetiae_contig9230.18250.1 vs. uniprot
Match: A0A7S2P5B9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P5B9_9STRA)

HSP 1 Score: 106 bits (265), Expect = 3.540e-24
Identity = 71/228 (31.14%), Postives = 116/228 (50.88%), Query Frame = 0
Query:    5 DVKYWDNSYGKTLDDLEVFVGTVESVDGSTRESAISEASNSLKRLAGMRRSYNLEIKLLKDPASKAHYNLEKSQKDARFMTLQARFEAAKESGQSKRDQLFGGRRDVESGGAAERSAEAKLDEADQYQDKTEEAYKNMIGVLKETEQTADGTAVELTNQREQLGRITEDAINIDSMLTRADRLVKVFSKRMMTDKFIQCFGCLNIVAMLAIIIYVIANNV--DLGGDS 230
            D++YW+ +  + ++DL   +G V +  GS ++    EA   L+   G +RSY LE++++K+   +  Y  +    + +   L    +  K S  + +D L  G    ++G   E+  +A ++EA   QDKT+ +      ++ E++     T   L  QR Q+ RI   A      L RAD L+K FSKRM  DKFIQC  C+NI   + +I+++I  N   D G DS
Sbjct:    3 DIEYWEETLKEEIEDLSTVLGLVVAQTGSKQKQKFDEADKKLRDANGTKRSYKLEMRVIKNATQRKMYEKQLKDHETKLKALADHLKNLKSS--ATKDTLLEG---ADTGRTPEQEGDAMMNEARNTQDKTQTSLDRTKQLVAESKDIGQNTLATLEEQRAQIERIDAHADRTMENLGRADLLIKNFSKRMANDKFIQCCACINISLFIGVILFLIFKNRSDDDGDDS 225          
BLAST of mRNA_L-elsbetiae_contig9230.18250.1 vs. uniprot
Match: A0A7S2FIE2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FIE2_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.080e-21
Identity = 61/216 (28.24%), Postives = 108/216 (50.00%), Query Frame = 0
Query:    5 DVKYWDNSYGKTLDDLEVFVGTVESVDGSTRESAISEASNSLKRLAGMRRSYNLEIKLLKDPASKAHYNLEKSQKDARFMTLQARFEAAKESGQSKRDQLFGGRRDVESGGAAERSAEAKLDEADQYQDKTEEAYKNMIGVLKETEQTADGTAVELTNQREQLGRITEDAINIDSMLTRADRLVKVFSKRMMTDKFIQCFGCLNIVAMLAIIIYVI 220
            D+ YWD SY + ++D++  +  +E +D       +  A   +K +   + S+ +E++ L D   +  Y   K   D                      +L GG  D   GG      ++ L +  Q QD+TE + +N I +++   + AD T  EL  Q++Q+  ITE  + ++  +  AD+L++ FSKRMMTDK IQ F  +N++A++ +I++ I
Sbjct:    3 DIAYWDQSYREAIEDVDRILAEMEGLDTEEASQKLKAAKTKMKVVKKKKTSFQMELRQLHDDTQRTTYGERKQ--DXXXXXXXXXXXXXXXXXXXXXAELLGGASD---GGQVRMDNDSYLAKTHQIQDQTEASLQNTIEMMENANEVADETISELDRQKQQINEITEQLLTMEDNIKYADQLIRDFSKRMMTDKCIQIFAMMNMLALVVVIVFAI 213          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9230.18250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5KVH9_9PHAE1.030e-11675.93t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835Z1V1_9STRA6.760e-5847.41Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A835Z325_9STRA6.310e-4743.93Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2V573_9STRA1.540e-2733.19Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4A3K9_9STRA1.370e-2632.64Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
W7TW41_9STRA2.470e-2630.29Soluble nsf attachment protein receptor n=2 Tax=Mo... [more]
A0A7S1FMQ8_9STRA2.230e-2531.82Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
B8BZJ7_THAPS3.110e-2532.39Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2P5B9_9STRA3.540e-2431.14Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2FIE2_9STRA2.080e-2128.24Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.110coord: 120..199
e-value: 2.0E-12
score: 49.1
NoneNo IPR availablePANTHERPTHR21230:SF69coord: 14..219
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 14..219
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..221
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..199
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 222..242
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 120..189
NoneNo IPR availableTMHMMTMhelixcoord: 200..222
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 129..191
score: 8.522

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9230contigL-elsbetiae_contig9230:2158..7065 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9230.18250.1mRNA_L-elsbetiae_contig9230.18250.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9230 1435..7131 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9230.18250.1 ID=prot_L-elsbetiae_contig9230.18250.1|Name=mRNA_L-elsbetiae_contig9230.18250.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=243bp
MATGDVKYWDNSYGKTLDDLEVFVGTVESVDGSTRESAISEASNSLKRLA
GMRRSYNLEIKLLKDPASKAHYNLEKSQKDARFMTLQARFEAAKESGQSK
RDQLFGGRRDVESGGAAERSAEAKLDEADQYQDKTEEAYKNMIGVLKETE
QTADGTAVELTNQREQLGRITEDAINIDSMLTRADRLVKVFSKRMMTDKF
IQCFGCLNIVAMLAIIIYVIANNVDLGGDSEDPPPGPAGTEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom