prot_L-elsbetiae_contig917.18191.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig917.18191.1
Unique Nameprot_L-elsbetiae_contig917.18191.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length911
Homology
BLAST of mRNA_L-elsbetiae_contig917.18191.1 vs. uniprot
Match: D7G7E5_ECTSI (VHL domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E5_ECTSI)

HSP 1 Score: 896 bits (2316), Expect = 5.720e-314
Identity = 514/941 (54.62%), Postives = 620/941 (65.89%), Query Frame = 0
Query:    1 MDNLLPALANIDVTSNEFRESALPYQQWEAQRTHNTPTTPSDVGHLLPPIGGRKPRRDSSGNPLP-VPPHIEPSPPRPAPVDRNLLDLYDPALDPSPIGKEERGAMQPVRISRIVPRPESLSADKDSRGVKQPDKLPTSATLVTVLNGHRTQRSREDWVSTPGSD-----------EENCIDIFVEGFSSGIDHATLLPAELLCRTLQNGSQGPPNLSSPFPGETPHPLNAREGSLGLTVLLARTGEWFDAVDDVVQASRTEQPMQVNTSKAS-QDNDLLAANTNNTQTMFQREDGKPGLPRNAFRVQFEPGPLGIELEEHPGQQGIVQVRQVLQAGQAELDGRLSAGCFVVAVGDWGESSSSAPHHSTPSDNSPDSTPFATVCVTSGADDGGSLDVSGLRSSASGGGSSAKAHKPAIIRSLVEFEEAVSTRRSDRLFVIWALDRQAPEALAALGSPDSKRVRTMPHEWSSESLYARFQK---GYGEGSYSSGYERQQHFDPLNASSLRRPNNLDESTKPVALEGAPGWESGSAFGYGKDSLEYSLSSTNGLEVVSYDRIRPREEEGG--LRIRGAQSKGNVSPPAFVSPEGTTGGE------------TRSVSGEKHRINRLKIGERASTGWEFETGGGMFDEDDQGIAARRHPASKQVIVGATASTADEAENK-PPFPLGLQASMVDEFAVFIWFYNSHESASMNVSWIDYDGNRVARRSLAPGACYFERSFATHPWVIHCDDRIHCGQHEDLSKNDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQECCVVRLGDAMALARLTGSLIWNPTGRTLSIAKQAKISVPGMSVAAHADIGSNEMDGAGLNPGMKRLCMTGPRREAEEARARAGRAAVRKEKANILQEMKTWRAHPLSGVEATVGGVGDDGQIAEGALGRLGQGVPNLRVVMIGSSNWSE 910
            M+NLLP +A IDVTSN FRE++LPYQQWE +RTH+TPTTPS+VGHLLPPIGGRKPRRD SG+ LP + P++EPS P PAPVDRN   LYDPALDPSPIGKEERG +QPVRISRIVPR +S     + +G  +  + P   T VTVLNGHRTQ  R D  S P  D           EE CID+FVEGFS GIDH TLLP+E+ CR LQ+GSQGPP  SS  P ++ H L+ REG LGLTV LART EW   +D  VQ  + ++P++      S +D+  LA  T  T  +FQREDG P   RNAFRVQFEPGPLG+ELEE+PG++GIV+VR+VLQAGQAELDGRLSAGC +VAVG W E+S++       +  +      A      G D  G+LDV  LRSSA  GGS AK+H+ AIIRSL +FEEAVS R  DRLFV+WALDR APEA+AALG P +  V T+P  WS  SLY+R +    G   G++  G ERQ+ F+   AS+  +    +E T P    GAPGWE+ ++   G+DSL YSLSS    ++ S  R +     GG  L+      + +++  AF SP+  TG E            +R   G   R    + G R++ GWEFETGGG+FD+ DQG+AAR+HP   Q  +   A+ ADE E K P FPLGL++S VD+ AVFIWF N+HESA M VSWI+YDG RV RRSLAPGACYFERSFATHPWVI   D  H G     +   +                             + E CVVRLGDAMALA+ TGSLIWNPTGRTLSI KQA++ VPGMS AA A +G+   DG GL+PGMKR CM G RREAEEARARA RA VR+EKA +L+EMK WR HPL G     GG+G  G +AEG  G+LGQGVPNLRVVM+G S WSE
Sbjct:    1 MENLLPVVAGIDVTSNHFRETSLPYQQWETKRTHHTPTTPSEVGHLLPPIGGRKPRRDESGSSLPPISPYVEPSLPCPAPVDRNRSGLYDPALDPSPIGKEERGKVQPVRISRIVPRQDSGLGALELQGAARSAEGPHIPTAVTVLNGHRTQHMR-DRTSAPAGDCASAADVLSEDEERCIDVFVEGFSRGIDHETLLPSEMFCRALQHGSQGPPKPSSLIPEDSRHYLDVREGYLGLTVFLARTSEWSGTIDGGVQGEKQDEPIEPGIGDESDRDDRKLATETEITHMIFQREDGTPAPSRNAFRVQFEPGPLGVELEEYPGERGIVRVRRVLQAGQAELDGRLSAGCLIVAVGGWDEASANGALRPNTASGA-----GAGHVALDGVDIYGNLDVPALRSSAMDGGSGAKSHESAIIRSLADFEEAVSCREPDRLFVLWALDRHAPEAVAALGPPQANGVCTVPRGWSPASLYSRRRNEGGGRARGAFPPGSERQRPFE---ASTSPKWQGYEE-TVPA---GAPGWETATSLARGRDSLGYSLSSDR-PKLASSPRNQASHAAGGGQLQAXXXXREADLATSAFGSPKEVTGSERLAAGIDRLGWPSRESEGGAPRFG--EGGARSAQGWEFETGGGIFDDSDQGLAARKHPGRSQATLAPAAAPADETEKKLPTFPLGLESSAVDDLAVFIWFCNNHESAVMKVSWINYDGRRVPRRSLAPGACYFERSFATHPWVIEHSDSNHYGNRSLHAGGQQEEKRESTGSGAPAPLQPSPPREAGDDD--DAELCVVRLGDAMALAQFTGSLIWNPTGRTLSITKQARVGVPGMSAAARAAVGAGVEDGGGLDPGMKRQCMAGQRREAEEARARAARAVVREEKARVLEEMKAWRTHPLGG-----GGLGAGGGVAEGLGGKLGQGVPNLRVVMMGLSGWSE 918          
BLAST of mRNA_L-elsbetiae_contig917.18191.1 vs. uniprot
Match: A0A6H5JVY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVY5_9PHAE)

HSP 1 Score: 820 bits (2119), Expect = 9.630e-284
Identity = 498/958 (51.98%), Postives = 600/958 (62.63%), Query Frame = 0
Query:   29 EAQRTHNTPTTPSDVGHLLPPIGGRKPRRDSSGNPLP-VPPHIEPSPPRPAPVDRNLLDLYDPALDPSPIGKEERGAMQPVRISRIVPRPES-LSADKDSRGVKQPDKLPTSATLVTVLNGHRTQRSREDWVSTPGSD-----------EENCIDIFVEGFSSGIDHATLLPAELLCRTLQNGSQGPPNLSSPFPGETPHPLNAREGSLGLTVLLARTGEWFDAVDDVVQASRTEQPMQVNTSKASQDNDLLAANTNNTQTMFQREDGKPGLPRNAFRVQFEPGPLGIELEEHPGQQGIVQVRQVLQAGQAELDGRLSAGCFVVAVGDWGESSSSAPHHSTPSDNSPDSTPFATVCVTSGADDGGSLDVSGLRSSASGGGSSAKAHKPAIIRSLVEFEEAVSTRRSDRLFVIWALDRQAPEALAALGSPDSKRVRTMPHEWSSESLYARFQ---KGYGEGSYSSGYERQQHFDPLNASSLRRPNNLDESTKPVALEGAPGWESGSAFGYGKDSLEYSLSSTNGLEVVSYDRIRPREEEGG--LRIRGAQSKGNVSPPAFVSPEGTTGGETRSVSGEKHRINRL------------KIGE---RASTGWEFETGGGMFDEDDQGIAARRHPASKQVIVGATASTADEAENKPP-FPLGLQASMVDEFAVFIWFYNSHESASMNV------------------------------------------SWIDYDGNRVARRSLAPGACYFERSFATHPWVIHCDDRIHCGQHEDLSKNDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQECCVVRLGDAMALARLTGSLIWNPTGRTLSIAKQAKISVPGMSVAAHADIGSNEMDGAGLNPGMKRLCMTGPRREAEEARARAGRAAVRKEKANILQEMKTWRAHPLSGVEATVGGVGDDGQIAEGALGRLGQGVPNLRVVMIGSSNWSE 910
            + +RTH+TPTTPSDVGHLLPPIGGRKPRRD SG+ LP +PP +EPS P PAPVDRN   LYDPALDPSPIGKEERG +QPVRISR+VPR +S L A +     +  + LP   T+VTVLNG+ TQ  R D  S P  D           EE+CID+FVEGFS G+DH TLLP+E+ CR LQ+GSQGPP  SS    ++ H L+ REG LGLTV LART EW   +D  VQ  + ++ ++            LAA    T+ +FQREDG P   RNAFRVQFEPGPLG+ELEE+PG +GIV+VR+VLQAGQAELDGRLSAGC +VAVG W ESS++      PS  S   T      V  G D  G+LDV  LRSSA  GGS A+AHK AIIRSL +FEEAVS R  DRLFV+WALDR APEA+AALG P +  V T+P  WS  S+Y+R +   +G   G++ SG ERQ+ F+   AS   +    +ES      EGA G E+ +     +DSL YSLSS    ++ S+ R +     GG  L+  G Q + +++  AF SP+  TG E R  +G    INRL            + GE   R + GWEFETGGG+FD+DDQG+AAR+HPA +Q  +   A+ ADEAE KPP FPLGL++S VD+ AVFIWF N+HESA M V                                          SWIDYDG RV RRSLAPGACYFERSFATHPWVI   D    G ++                                    + E CVVRLGD MA+A+ TGSLIWNPTGRTLSI KQA++ VPGMS AA A +G+   +G GL+PGMKRLCM G RREAEEARARA RA VR+EKA +L+E+K WR HPL G     GG+G  G +AEG  G+LGQGVPNLRVVM+GS  WSE
Sbjct:   23 QTKRTHHTPTTPSDVGHLLPPIGGRKPRRDGSGSSLPPIPPCVEPSLPCPAPVDRNRSGLYDPALDPSPIGKEERGKVQPVRISRVVPRQDSGLGAQELQGEARSAEGLPIP-TVVTVLNGYNTQH-RRDRTSAPAGDYASATHVLSEDEESCIDVFVEGFSRGVDHETLLPSEMFCRALQHGSQGPPKPSSLISEDSRHYLDVREGYLGLTVFLARTSEWSGTIDGGVQGEKQDECIEPGIGDGK-----LAAEMAITRMIFQREDGTPAPSRNAFRVQFEPGPLGVELEEYPGDRGIVRVRRVLQAGQAELDGRLSAGCLIVAVGGWDESSANGTLR--PSTASGAGTGHV---VLDGVDIYGNLDVPALRSSAMDGGSGAEAHKSAIIRSLADFEEAVSCREPDRLFVLWALDRHAPEAVAALGPPQANGVCTVPRGWSPASVYSRRRNEGRGRVRGTFPSGSERQRPFE---ASKSPKSQGYEESEP----EGALGRETTTILARSRDSLRYSLSSDR-PKLASFARNQASHAAGGGQLQTGGGQPEADLAMSAFGSPKEVTGSE-RLAAG----INRLGWPSREGKGGAPRFGEGGARNAIGWEFETGGGIFDDDDQGLAARKHPARRQATLAPAATPADEAEEKPPTFPLGLESSAVDDLAVFIWFCNNHESAVMKVEQPHEGVGNPVRGFGFCWEKEHFVLTPRDTHGVPLIQRWHVVSWIDYDGRRVPRRSLAPGACYFERSFATHPWVIQHSDSNQAGSNDRSLHAGGQQEEKCEPTGSGAPVPLKPSPPREAGDDDDAELCVVRLGDTMAVAQFTGSLIWNPTGRTLSITKQARVGVPGMSAAARAAVGAGVEEGGGLDPGMKRLCMAGQRREAEEARARAARAVVREEKARVLEEIKAWRTHPLGG-----GGLGAGGGVAEGLGGKLGQGVPNLRVVMMGSG-WSE 949          
BLAST of mRNA_L-elsbetiae_contig917.18191.1 vs. uniprot
Match: A0A835ZGW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW3_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.030e-13
Identity = 64/216 (29.63%), Postives = 84/216 (38.89%), Query Frame = 0
Query:  602 GWEFETGGGMF-------------------DEDDQGIAARRHPASKQVIVGATASTADEAENKPPFPLGLQASMVDEFAVFIWFYNSHESASMNVSWIDYDGNRVARRSLAPGACYFERSFATHPWVIHCDDRIHCGQHEDLSKNDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQECCVVRLG-DAMAL-ARLTGSLIWNPTGRTLSIAKQAK 796
            GW F TGGG+                    D DD G  A R   S+  +  ++ S           PL + AS  D   VF+ F N+H +  + V W+DY G  V RR L PG  YFERSFA+HPW++        G                                         EC  VR G DA+A  A L    +W+P  R++S+  QAK
Sbjct:  466 GWGFATGGGILESHDAVLSPPPRDAPAGDIDSDDDGQVAARVRRSEGAVPASSQSPXXXXXXXLSLPLSMGASKADVAPVFLCFSNAHATMKLRVGWLDYGGQNVPRRVLLPGQTYFERSFASHPWLLQAMGPSGTGS--------------------------------------GSECVAVRCGADAVAAGAGLAFCAMWDPLRRSVSVMPQAK 643          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig917.18191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7E5_ECTSI5.720e-31454.62VHL domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JVY5_9PHAE9.630e-28451.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZGW3_9STRA2.030e-1329.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037140von Hippel-Lindau disease tumour suppressor, beta domain superfamilyGENE3D2.60.40.780coord: 643..731
e-value: 1.2E-8
score: 36.9
IPR036208VHL superfamilySUPERFAMILY49468VHLcoord: 654..711

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig917contigL-elsbetiae_contig917:691..4483 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig917.18191.1mRNA_L-elsbetiae_contig917.18191.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig917 691..4483 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig917.18191.1 ID=prot_L-elsbetiae_contig917.18191.1|Name=mRNA_L-elsbetiae_contig917.18191.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=911bp
MDNLLPALANIDVTSNEFRESALPYQQWEAQRTHNTPTTPSDVGHLLPPI
GGRKPRRDSSGNPLPVPPHIEPSPPRPAPVDRNLLDLYDPALDPSPIGKE
ERGAMQPVRISRIVPRPESLSADKDSRGVKQPDKLPTSATLVTVLNGHRT
QRSREDWVSTPGSDEENCIDIFVEGFSSGIDHATLLPAELLCRTLQNGSQ
GPPNLSSPFPGETPHPLNAREGSLGLTVLLARTGEWFDAVDDVVQASRTE
QPMQVNTSKASQDNDLLAANTNNTQTMFQREDGKPGLPRNAFRVQFEPGP
LGIELEEHPGQQGIVQVRQVLQAGQAELDGRLSAGCFVVAVGDWGESSSS
APHHSTPSDNSPDSTPFATVCVTSGADDGGSLDVSGLRSSASGGGSSAKA
HKPAIIRSLVEFEEAVSTRRSDRLFVIWALDRQAPEALAALGSPDSKRVR
TMPHEWSSESLYARFQKGYGEGSYSSGYERQQHFDPLNASSLRRPNNLDE
STKPVALEGAPGWESGSAFGYGKDSLEYSLSSTNGLEVVSYDRIRPREEE
GGLRIRGAQSKGNVSPPAFVSPEGTTGGETRSVSGEKHRINRLKIGERAS
TGWEFETGGGMFDEDDQGIAARRHPASKQVIVGATASTADEAENKPPFPL
GLQASMVDEFAVFIWFYNSHESASMNVSWIDYDGNRVARRSLAPGACYFE
RSFATHPWVIHCDDRIHCGQHEDLSKNDEEGGGGFRNRGDQHSQQRQEQS
PPPQRAHDEQECCVVRLGDAMALARLTGSLIWNPTGRTLSIAKQAKISVP
GMSVAAHADIGSNEMDGAGLNPGMKRLCMTGPRREAEEARARAGRAAVRK
EKANILQEMKTWRAHPLSGVEATVGGVGDDGQIAEGALGRLGQGVPNLRV
VMIGSSNWSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037140VHL_beta_dom_sf
IPR036208VHL_sf