prot_L-elsbetiae_contig9121.18153.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9121.18153.1
Unique Nameprot_L-elsbetiae_contig9121.18153.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length411
Homology
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BLAST of mRNA_L-elsbetiae_contig9121.18153.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 8.690e-12
Identity = 44/85 (51.76%), Postives = 55/85 (64.71%), Query Frame = 0 
Query:    4 LHVILREGMPTRLWMG-APARETRSAKILNATRVPVVRAREVTWNLRASALRNM-GNSFSKAKRFTFGDEFNGSV-RGVAWPRGL 85
            L + ++ G PTRLW G A  RETRS K  N TRVPVVRAR VTW L   ALRNM G+++S+   F+ G  F+  + RG+ WP  L
Sbjct:   52 LKLNVQHGTPTRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGLALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKL 136
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BLAST of mRNA_L-elsbetiae_contig9121.18153.1 vs. uniprot
Match: A0A6H5JA08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA08_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.580e-10
Identity = 43/85 (50.59%), Postives = 54/85 (63.53%), Query Frame = 0 
Query:    4 LHVILREGMPTRLWMG-APARETRSAKILNATRVPVVRAREVTWNLRASALRNM-GNSFSKAKRFTFGDEFNGSV-RGVAWPRGL 85
            L + ++ G P RLW G A  RETRS K  N TRVPVVRAR VTW L   ALRNM G+++S+   F+ G  F+  + RG+ WP  L
Sbjct:   83 LKLNVQHGTPPRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGVALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKL 167
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9121.18153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT95_ECTSI8.690e-1251.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA08_9PHAE1.580e-1050.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 182..223
e-value: 1.7E-7
score: 31.3
coord: 82..112
e-value: 1.2E-5
score: 25.4
coord: 280..310
e-value: 1.7E-5
score: 24.9
coord: 314..356
e-value: 3.5E-5
score: 23.9
coord: 226..254
e-value: 2.1E-4
score: 21.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 147..333
e-value: 8.0E-8
score: 33.1
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 134..314
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 61..123
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 134..314
coord: 258..378
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 258..378
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 61..123
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 64..359

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9121contigL-elsbetiae_contig9121:3949..5181 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9121.18153.1mRNA_L-elsbetiae_contig9121.18153.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9121 3949..5183 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9121.18153.1 ID=prot_L-elsbetiae_contig9121.18153.1|Name=mRNA_L-elsbetiae_contig9121.18153.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=411bp
TPTLHVILREGMPTRLWMGAPARETRSAKILNATRVPVVRAREVTWNLRA
SALRNMGNSFSKAKRFTFGDEFNGSVRGVAWPRGLEELTFGDAFNQPMTG
VELPASLKELTFEGCTTHSLQGVSWPVSLEMLGFRGVNHPLAGVICPQSL
QTLVFLGIVPNEPISGTVWPVSLKRLCLGDGFNQPIDEVVWPPSLEDLSV
GYDFDQPITRANWPSSLAKLTLGGLFNQAIDAELWPGSLKNIELGWYFNQ
PIDGARWPAFLEQLTLGWNFDLPMTGVNWPNSLEVLRLGHDFNQAIDMVS
WPRSLKEMTFDSVFNQPIGGVRWPASLERLTFGCGFNQPIVAVAWPISLR
LLSFGTCFNQPIADVCWPDSLQEICLGGSSPPRAHDQYLTSPDPHGVVSE
FNQPINEVAWP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf