prot_L-elsbetiae_contig9081.18113.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9081.18113.1
Unique Nameprot_L-elsbetiae_contig9081.18113.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length294
Homology
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BLAST of mRNA_L-elsbetiae_contig9081.18113.1 vs. uniprot
Match: D8LCA6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCA6_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 5.430e-42
Identity = 82/94 (87.23%), Postives = 87/94 (92.55%), Query Frame = 0 
Query:  195 PSSSRI-GARTVANPIKVGSPPLRAVKPPRRDIRRDYLTNLGMKNAVVAGPGGARTPPMMIRRSSFIQSVENPVEEQLKDPNAGEITFEGVLRV 287
            PSS R+  ARTVA+P+KVGSPPLRAV+PPRRDIRRDYLTNLGMK AVVAGPG ARTPP MIRRSSFI+SVENPVEEQLKDPNAGEIT EGVLRV
Sbjct:  302 PSSHRLRSARTVADPLKVGSPPLRAVRPPRRDIRRDYLTNLGMKRAVVAGPGDARTPPPMIRRSSFIESVENPVEEQLKDPNAGEITLEGVLRV 395
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9081.18113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCA6_ECTSI5.430e-4287.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9081contigL-elsbetiae_contig9081:5367..7133 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9081.18113.1mRNA_L-elsbetiae_contig9081.18113.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9081 5367..7133 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9081.18113.1 ID=prot_L-elsbetiae_contig9081.18113.1|Name=mRNA_L-elsbetiae_contig9081.18113.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=294bp
AARAAEAEAAAEAEEGAVAARSASRVAVAKASFEWSSSSLDGKAKAARGD
QGAGGTDAPAATAVAVAVATSARRVEHPAVAAAAVAAAAPVTTAQMEEGK
LAQKTAAAAASQPSATVAQAEAALADGAGANEHESRARGNEQAHQAPSSS
FSVPCTAVATTPTPPGAAAPAPSSTAPTSLSSTCSTSSRSSSPPPSSSRI
GARTVANPIKVGSPPLRAVKPPRRDIRRDYLTNLGMKNAVVAGPGGARTP
PMMIRRSSFIQSVENPVEEQLKDPNAGEITFEGVLRVSLPLSF*
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