prot_L-elsbetiae_contig9032.18062.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9032.18062.1
Unique Nameprot_L-elsbetiae_contig9032.18062.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length96
Homology
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BLAST of mRNA_L-elsbetiae_contig9032.18062.1 vs. uniprot
Match: D7FX18_ECTSI (KH domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX18_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 4.540e-20
Identity = 54/96 (56.25%), Postives = 60/96 (62.50%), Query Frame = 0 
Query:    1 MRESRATIVLKTYQDRSGHDVVIHGTPAAVQAARRLVEDFYRSKGCEPTALRPPSTAFRAGASAATPPAHRAGLL----LPHPAEPTGAMIGRLGR 92
            M+ESRA IVLKTY D++GHDVVI G+P AV   RRLVEDFYRSKG EPT L+PPS                 G+     LP P  PT AMIG LGR
Sbjct:  611 MKESRARIVLKTYADKTGHDVVITGSPQAVLTGRRLVEDFYRSKGIEPTLLQPPSXXXXXXXXXXXXXGRPGGVAPRARLPDPMMPTEAMIGHLGR 706
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BLAST of mRNA_L-elsbetiae_contig9032.18062.1 vs. uniprot
Match: D7FX21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX21_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 3.140e-17
Identity = 40/60 (66.67%), Postives = 51/60 (85.00%), Query Frame = 0 
Query:    1 MRESRATIVLKTYQDRSGHDVVIHGTPAAVQAARRLVEDFYRSKGCEPTALRPPSTAFRA 60
            M++SRA IV+K Y DRSG+DV+I GTP AV+ A+RLVE+FYRSKGC+P+AL PPS+A  A
Sbjct:  791 MKDSRAKIVVKPYPDRSGNDVIITGTPNAVKTAKRLVEEFYRSKGCQPSALPPPSSAVAA 850
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BLAST of mRNA_L-elsbetiae_contig9032.18062.1 vs. uniprot
Match: A0A6H5J8V2_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8V2_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.320e-15
Identity = 53/98 (54.08%), Postives = 57/98 (58.16%), Query Frame = 0 
Query:    1 MRESRATIVLKTYQDRSGHDVVIHGTPAAVQAARRLVEDFYRSKGCEPTALRPPSTAFRA------GASAATPPAHRAGLLLPHPAEPTGAMIGRLGR 92
            M+ESRA IVLK Y D++GHDVVI G+P A   ARRLVEDFYRSKG EPT L P             G      P  R    LP P  PT AMIG LGR
Sbjct:  757 MKESRARIVLKPYADKTGHDVVITGSPQAT--ARRLVEDFYRSKGIEPTHLPPXXXXXXXXXXXXXGRPGGVAPRAR----LPDPMMPTEAMIGHLGR 848
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9032.18062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FX18_ECTSI4.540e-2056.25KH domain containing protein n=1 Tax=Ectocarpus si... [more]
D7FX21_ECTSI3.140e-1766.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8V2_9PHAE1.320e-1554.08RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9032contigL-elsbetiae_contig9032:3975..4841 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9032.18062.1mRNA_L-elsbetiae_contig9032.18062.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9032 3975..5422 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9032.18062.1 ID=prot_L-elsbetiae_contig9032.18062.1|Name=mRNA_L-elsbetiae_contig9032.18062.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=96bp
MRESRATIVLKTYQDRSGHDVVIHGTPAAVQAARRLVEDFYRSKGCEPTA
LRPPSTAFRAGASAATPPAHRAGLLLPHPAEPTGAMIGRLGRATSE
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