prot_L-elsbetiae_contig9028.18050.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9028.18050.1
Unique Nameprot_L-elsbetiae_contig9028.18050.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length258
Homology
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BLAST of mRNA_L-elsbetiae_contig9028.18050.1 vs. uniprot
Match: D8LRA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA4_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 4.370e-31
Identity = 62/77 (80.52%), Postives = 69/77 (89.61%), Query Frame = 0 
Query:  179 SSPALLALLLVLKSFLKHLSSLRRGEKFCIVWNEFLCCLEILLGTVGTAPPTLVDGAAAGLGAVLGEMHREGLFAAA 255
            SSPALLALLL+LKSFLKHLS+LRRG++FC VW +FLCCLEILLGT G APPTLVDGA  GLGAV+GEM  EGLFA+A
Sbjct:   75 SSPALLALLLMLKSFLKHLSALRRGDRFCEVWRQFLCCLEILLGTEGNAPPTLVDGAVTGLGAVVGEMIGEGLFASA 151
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BLAST of mRNA_L-elsbetiae_contig9028.18050.1 vs. uniprot
Match: A0A6H5KYE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYE6_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.900e-27
Identity = 63/83 (75.90%), Postives = 72/83 (86.75%), Query Frame = 0 
Query:  176 QQLSSPALLALLLVLKSFLKHLSSLRRGEKFCIVWNEFLCCLEILLGTVGTAPPTLVDGAAAGLGAVLGEMHREGLFAAASSA 258
            +Q+SS ALLALLL+LKSFLKHLS+LRRG++FC VW +FLCCLEILLGT G APPTLVDGA  GLGAV+GEM  EGLFA A +A
Sbjct:  334 RQVSSLALLALLLMLKSFLKHLSALRRGDQFCEVWCQFLCCLEILLGTEGNAPPTLVDGAVTGLGAVVGEMIGEGLFAFAVAA 416
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9028.18050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRA4_ECTSI4.370e-3180.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYE6_9PHAE1.900e-2775.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..194
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 195..258
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9028contigL-elsbetiae_contig9028:111..3229 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9028.18050.1mRNA_L-elsbetiae_contig9028.18050.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9028 111..3229 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9028.18050.1 ID=prot_L-elsbetiae_contig9028.18050.1|Name=mRNA_L-elsbetiae_contig9028.18050.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=258bp
QVVLDGLAEEAPPEMLQDVMLAIVFPLARHTWGVAAFGGEQQQRWSHHDP
PSLSSTQLSNRRSRNAAETPPPPPPPPPSQNERQGVESTSRRHRAERGDS
AAGGVTMVAEGEEGEDGFEMVEAPEKTGHSSHTDAAASALTLSREPSEAM
GDGEDAEDDNGGGDNDSDSDSEVELQQLSSPALLALLLVLKSFLKHLSSL
RRGEKFCIVWNEFLCCLEILLGTVGTAPPTLVDGAAAGLGAVLGEMHREG
LFAAASSA
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