prot_L-elsbetiae_contig9023.18043.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9023.18043.1
Unique Nameprot_L-elsbetiae_contig9023.18043.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length164
Homology
BLAST of mRNA_L-elsbetiae_contig9023.18043.1 vs. uniprot
Match: D7FKX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKX2_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 2.160e-69
Identity = 132/168 (78.57%), Postives = 139/168 (82.74%), Query Frame = 0
Query:    1 MSKELTRYGPSDAEHLGLHSIQDVLSDIAAATLAPREPPAPIATAIASSVEVKVASALASVP--EEPAAAPAVREEEVLAAWGLGPVVSDASEVE-IQAPGAGEECNCEDVEEEG--VSNEKMAIKRTYQPSTLKRKRKHGFLYRAKTRLGQKIMRRRQDKGRWRLGI 163
            MSKELTRYGP+DAEHLGLHSIQDVLSDIAAATL P +  AP  TA+A S EV      ASVP  EEPAAAPAVREEEVLAAWGLGPVV+D SEVE IQAP  GE      V EEG  VSNEK+AIKRTYQPSTLKRKRKHGFLYRAKTRLG+KI+RRRQDKGRWRLGI
Sbjct:   76 MSKELTRYGPADAEHLGLHSIQDVLSDIAAATLTPHKLAAPAVTAVAPSAEV------ASVPATEEPAAAPAVREEEVLAAWGLGPVVTDGSEVEGIQAPPVGE------VGEEGGEVSNEKVAIKRTYQPSTLKRKRKHGFLYRAKTRLGKKILRRRQDKGRWRLGI 231          
BLAST of mRNA_L-elsbetiae_contig9023.18043.1 vs. uniprot
Match: Q013P8_OSTTA (Ribosomal protein L34, conserved site n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q013P8_OSTTA)

HSP 1 Score: 62.8 bits (151), Expect = 3.250e-10
Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 0
Query:   91 EVEIQAPGAGEECNCEDVEEEGVSNE-KMAIKRTYQPSTLKRKRKHGFLYRAKTRLGQKIMRRRQDKGRWRL 161
            EV I+APGA  E    ++EEEGV     +A KRTYQPS L RKR+HGF  R +T  G+KI+ RR+ KGR RL
Sbjct:    2 EVAIEAPGASGEV---EIEEEGVGEAMSLATKRTYQPSNLVRKRRHGFRTRLRTADGRKILSRRRRKGRRRL 70          
BLAST of mRNA_L-elsbetiae_contig9023.18043.1 vs. uniprot
Match: RL34_THEAB (50S ribosomal protein L34 n=7 Tax=Thermotogales TaxID=2419 RepID=RL34_THEAB)

HSP 1 Score: 58.5 bits (140), Expect = 7.250e-9
Identity = 27/44 (61.36%), Postives = 35/44 (79.55%), Query Frame = 0
Query:  120 IKRTYQPSTLKRKRKHGFLYRAKTRLGQKIMRRRQDKGRWRLGI 163
            +KRTYQPS +KRKR HGFL R KT  G+K+++ R+ KGRWRL +
Sbjct:    1 MKRTYQPSRIKRKRTHGFLARKKTAGGRKVLKNRRRKGRWRLAV 44          
BLAST of mRNA_L-elsbetiae_contig9023.18043.1 vs. uniprot
Match: A0A7V3ZUN1_9BACT (50S ribosomal protein L34 n=1 Tax=candidate division WOR-3 bacterium TaxID=2052148 RepID=A0A7V3ZUN1_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 7.400e-9
Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 0
Query:  121 KRTYQPSTLKRKRKHGFLYRAKTRLGQKIMRRRQDKGRWRLGI 163
            KRTYQPS +KRKR HGFL R +T  G+K+++RR+ KGRWRL +
Sbjct:    3 KRTYQPSRIKRKRTHGFLVRMRTPGGRKVLKRRRQKGRWRLTV 45          
BLAST of mRNA_L-elsbetiae_contig9023.18043.1 vs. uniprot
Match: A0A7S3NIP4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIP4_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 9.060e-9
Identity = 28/45 (62.22%), Postives = 38/45 (84.44%), Query Frame = 0
Query:  117 KMAIKRTYQPSTLKRKRKHGFLYRAKTRLGQKIMRRRQDKGRWRL 161
            K AIKRT+QPS ++RKRKHGFL R  ++ G+KI+ RR++KGRWR+
Sbjct:  113 KQAIKRTFQPSIIRRKRKHGFLSRINSKKGRKIINRRKNKGRWRI 157          
BLAST of mRNA_L-elsbetiae_contig9023.18043.1 vs. uniprot
Match: A0A836CKK1_9STRA (Ribosomal protein L34-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKK1_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.010e-8
Identity = 56/161 (34.78%), Postives = 81/161 (50.31%), Query Frame = 0
Query:    1 MSKELTRYGPSDAEHLGLHSIQDVLSDIAAATLAPREPPAPIATAIASSVEVKVASALASVPEEPAAAPAVREEEVLAAWGLGPVVSDASEVEIQAPGAGEECNCEDVEEEGVSNEKMAIKRTYQPSTLKRKRKHGFLYRAKTRLGQKIMRRRQDKGRWRL 161
            M +++  +  ++A  LGL SI D+L+D    TLA                     +A A    E    PA  E EV     + P  S A  VE Q  G  E+     ++E  +    +A+KRT+QP+TL+RKRK GFL R   + G+KI++RR++KGR RL
Sbjct:    1 MQEQIRNFVTAEARGLGLLSISDILADFDRITLAD----------FRRGEYGSARAASADAAHEVTLPPAAHEVEVEV---VAPAASAA--VEQQRVGVPEDAGGA-IQEPEMKPAVLAVKRTFQPNTLRRKRKLGFLARVGDKNGRKILQRRRNKGRTRL 145          
BLAST of mRNA_L-elsbetiae_contig9023.18043.1 vs. uniprot
Match: A0A2N7Q8D5_9BACT (50S ribosomal protein L34 n=5 Tax=cellular organisms TaxID=131567 RepID=A0A2N7Q8D5_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 1.020e-8
Identity = 27/44 (61.36%), Postives = 35/44 (79.55%), Query Frame = 0
Query:  120 IKRTYQPSTLKRKRKHGFLYRAKTRLGQKIMRRRQDKGRWRLGI 163
            +KRTYQPS +K KRKHGF  R KTR G++I++ R+ KGRWRL +
Sbjct:    1 MKRTYQPSRIKMKRKHGFRARMKTRSGRRILKNRRKKGRWRLTV 44          
BLAST of mRNA_L-elsbetiae_contig9023.18043.1 vs. uniprot
Match: F8C4M3_THEGP (50S ribosomal protein L34 n=5 Tax=cellular organisms TaxID=131567 RepID=F8C4M3_THEGP)

HSP 1 Score: 57.8 bits (138), Expect = 1.430e-8
Identity = 27/44 (61.36%), Postives = 35/44 (79.55%), Query Frame = 0
Query:  120 IKRTYQPSTLKRKRKHGFLYRAKTRLGQKIMRRRQDKGRWRLGI 163
            +KRTYQPS +K KR+HGF  R KTR G++I+R R+ KGRWRL +
Sbjct:    1 MKRTYQPSRIKMKRRHGFRARMKTRSGRRILRNRRRKGRWRLTV 44          
BLAST of mRNA_L-elsbetiae_contig9023.18043.1 vs. uniprot
Match: A0A7V0Z319_9DELT (50S ribosomal protein L34 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V0Z319_9DELT)

HSP 1 Score: 57.8 bits (138), Expect = 1.430e-8
Identity = 27/44 (61.36%), Postives = 37/44 (84.09%), Query Frame = 0
Query:  120 IKRTYQPSTLKRKRKHGFLYRAKTRLGQKIMRRRQDKGRWRLGI 163
            +KRTYQPST++RKR HGFL R +T+ GQK+++RR+ KGR RL +
Sbjct:    1 MKRTYQPSTIRRKRTHGFLKRMETKAGQKVLKRRRAKGRKRLTV 44          
BLAST of mRNA_L-elsbetiae_contig9023.18043.1 vs. uniprot
Match: A0A2N7PKN3_9BACT (50S ribosomal protein L34 n=5 Tax=Thermodesulfobacteriaceae TaxID=188711 RepID=A0A2N7PKN3_9BACT)

HSP 1 Score: 57.8 bits (138), Expect = 1.460e-8
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0
Query:  121 KRTYQPSTLKRKRKHGFLYRAKTRLGQKIMRRRQDKGRWRLGI 163
            KRTYQPS LK KRKHGF  R KTR G++I++ R+ KGRWRL +
Sbjct:    3 KRTYQPSRLKMKRKHGFRARMKTRSGRRILKNRRRKGRWRLTV 45          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9023.18043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKX2_ECTSI2.160e-6978.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
Q013P8_OSTTA3.250e-1055.56Ribosomal protein L34, conserved site n=2 Tax=Ostr... [more]
RL34_THEAB7.250e-961.3650S ribosomal protein L34 n=7 Tax=Thermotogales Ta... [more]
A0A7V3ZUN1_9BACT7.400e-962.7950S ribosomal protein L34 n=1 Tax=candidate divisi... [more]
A0A7S3NIP4_9STRA9.060e-962.22Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A836CKK1_9STRA1.010e-834.78Ribosomal protein L34-domain-containing protein n=... [more]
A0A2N7Q8D5_9BACT1.020e-861.3650S ribosomal protein L34 n=5 Tax=cellular organis... [more]
F8C4M3_THEGP1.430e-861.3650S ribosomal protein L34 n=5 Tax=cellular organis... [more]
A0A7V0Z319_9DELT1.430e-861.3650S ribosomal protein L34 n=1 Tax=Deltaproteobacte... [more]
A0A2N7PKN3_9BACT1.460e-865.1250S ribosomal protein L34 n=5 Tax=Thermodesulfobac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000271Ribosomal protein L34TIGRFAMTIGR01030TIGR01030coord: 121..162
e-value: 5.7E-15
score: 53.3
IPR000271Ribosomal protein L34PFAMPF00468Ribosomal_L34coord: 121..161
e-value: 2.0E-17
score: 62.8
IPR000271Ribosomal protein L34PANTHERPTHR14503MITOCHONDRIAL RIBOSOMAL PROTEIN 34 FAMILY MEMBERcoord: 62..161
IPR000271Ribosomal protein L34HAMAPMF_00391Ribosomal_L34coord: 120..163
score: 12.814
IPR020939Ribosomal protein L34, conserved sitePROSITEPS00784RIBOSOMAL_L34coord: 121..140
NoneNo IPR availablePRODOMPD003101coord: 123..158
e-value: 5.0E-7
score: 125.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9023contigL-elsbetiae_contig9023:578..1069 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9023.18043.1mRNA_L-elsbetiae_contig9023.18043.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9023 526..1560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9023.18043.1 ID=prot_L-elsbetiae_contig9023.18043.1|Name=mRNA_L-elsbetiae_contig9023.18043.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=164bp
MSKELTRYGPSDAEHLGLHSIQDVLSDIAAATLAPREPPAPIATAIASSV
EVKVASALASVPEEPAAAPAVREEEVLAAWGLGPVVSDASEVEIQAPGAG
EECNCEDVEEEGVSNEKMAIKRTYQPSTLKRKRKHGFLYRAKTRLGQKIM
RRRQDKGRWRLGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000271Ribosomal_L34
IPR020939Ribosomal_L34_CS