prot_L-elsbetiae_contig902.18041.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig902.18041.1
Unique Nameprot_L-elsbetiae_contig902.18041.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length189
Homology
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: A0A6H5KVY6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY6_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.590e-12
Identity = 54/152 (35.53%), Postives = 71/152 (46.71%), Query Frame = 0
Query:   40 SRSGVACA--LYAGDTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRR----QSAESRLAEATTQQAQDKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHGNDSDLVVLGAKNL 185
            + +GVA A  L   D    V      VK F+D  + V VVFDG  PPAK GT+  RR RR    Q A +  A        +KL      FD R   +++  + AR   E   AP E D Q V  ++         Y++ NDSDL VLG ++L
Sbjct:  247 TETGVAAANLLLNNDVSRQVEECAREVKLFEDRNFLVTVVFDGQPPPAKGGTSQHRRERREKSAQQARALHAAGGCPMEVNKLASAACAFDGRVTAEIATRLRARIGGEVYIAPGEADPQLVVFQDIHLATGPNVYVYANDSDLTVLGVRDL 398          
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: D7G0K2_ECTSI (Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G0K2_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 7.220e-12
Identity = 53/149 (35.57%), Postives = 74/149 (49.66%), Query Frame = 0
Query:   43 GVACA--LYAGDTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESR---LAEATTQQAQ-DKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHGNDSDLVVLGAKNL 185
            GVA A  L   D    V      +K F+D  + V VVFDG  PPAK+GT+  RR RRQ +  +   L +A     + +KL      FD R   +++  + AR + E   AP E D Q V  ++         Y++ NDSDL VLG ++L
Sbjct:    5 GVAAANLLLNNDVSRQVEECARDMKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDL 153          
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: D7G4G5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G5_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 1.910e-10
Identity = 44/125 (35.20%), Postives = 66/125 (52.80%), Query Frame = 0
Query:   64 VKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESR---LAEATTQQAQ-DKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHGNDSDLVVLGAKN 184
            +K F+D  + V VVFDG  PPAK+GT+  RR RRQ +  +   L +A     + +KL      FD R   +++  + AR + E   AP + D Q V  ++         Y++ NDSDL VLG ++
Sbjct:    1 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGKADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRD 125          
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: D7FZU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZU5_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 8.820e-10
Identity = 44/126 (34.92%), Postives = 64/126 (50.79%), Query Frame = 0
Query:   64 VKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESR---LAEATTQQAQ-DKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHGNDSDLVVLGAKNL 185
            +K F+D  + V VVFDG  PPAK+GT+  RR RRQ +  +   L +A     + +KL      FD R   +++  + AR + E   AP E D Q    ++         Y++ NDSD  VLG  +L
Sbjct:    1 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVNIAPGEADPQLAVFQDIHLATGANVYVYANDSDFTVLGVLDL 126          
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: A0A8H6EV38_DEKBR (Exonuclease 1 n=1 Tax=Dekkera bruxellensis TaxID=5007 RepID=A0A8H6EV38_DEKBR)

HSP 1 Score: 66.2 bits (160), Expect = 2.020e-9
Identity = 62/195 (31.79%), Postives = 90/195 (46.15%), Query Frame = 0
Query:    1 MGVKDLLKALKEGASRQESFSRGDGL-LLIDGGFMLHKSLSRSGVACALYAGDTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESRLAEATTQQAQDKLMVQCVHFDARTVEKVSRAISA--RCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHG---NDSDLVVLGAKNLAWRI 189
            MGV  LL ALK       S  +  G  L ID    LHK +    +   L    TR  ++     V+  +      ++VFDG   P+KAGT +ERR RRQ+ + R  +A  +  + + M  C      T E     I    RC+++ + AP+E DSQ VYLE+          + G    DSDL+V G + L  ++
Sbjct:    1 MGVSGLLPALKS-IQTPISLEKYKGKRLAIDTYAWLHKGIFSCSLQLVL-GHPTRAYIDYVLRKVRMLRHFQIEPYLVFDGDHLPSKAGTEEERRKRRQTYKQRAIDALERHDRREAMGFCQKACDITPEMAKSLIEELKRCKIKYVVAPYEADSQMVYLEKS-------GLVDGIISEDSDLLVFGCQTLLTKM 186          
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: D8QEB2_SCHCM (Exonuclease 1 n=2 Tax=Schizophyllaceae TaxID=5332 RepID=D8QEB2_SCHCM)

HSP 1 Score: 65.1 bits (157), Expect = 3.730e-9
Identity = 54/193 (27.98%), Postives = 91/193 (47.15%), Query Frame = 0
Query:    1 MGVKDLLKALKEGASRQESFSRGDGLLLIDGGFMLHKSLSRSGVACALYAGDTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESRL----AEATTQQAQDKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHGNDSDLVVLGAKNLAWRI 189
            MG+  LL  LK   + ++        + +DG   LH+ +    V  A    +T   ++     V+  +  G   ++VFDG   PAK GT +ERR +R+ + +R     A+    QA+D  + +CV        +V +A+     V+ + AP+E D+Q  +LE           I   DSDL+V G KN+ +++
Sbjct:    1 MGITGLLPVLKSIQTTRKLSDFAGQTIAVDGYVWLHRGVYNCSVELAT-GKETHKYIDYFMHRVRMLRHNGVEPYIVFDGGPLPAKKGTENERRQKREESLARANMLAAQGKHSQARDHYL-KCVDVTPEMAYQVIKALRVE-NVKYVVAPYEADAQMAFLERTGAVHA----ILTEDSDLLVFGCKNVLFKL 186          
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: D7FZG7_ECTSI (Exonuclease I Exo1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG7_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 4.190e-9
Identity = 49/156 (31.41%), Postives = 74/156 (47.44%), Query Frame = 0
Query:   34 MLHKSLSRSGVACALYAGDTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESR---LAEATTQQAQ-DKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHGNDSDLVVLGAKNL 185
            +L+K +SR G  CA                +K F+D  + V VVFDG  PP K+GT+  RR RR+ +  +   L +A     + +KL      F+ R   +++    A  + E   AP E D Q V  ++         Y++ NDSDL VLG ++L
Sbjct:   12 LLNKDVSRQGEECARD--------------MKLFEDHNFLVTVVFDGRPPPVKSGTSQHRRERRKKSAQQARALHDAGGCPVEINKLASAACAFNGRVTAEIATRSRALIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDL 153          
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: A0A7D9CV32_DEKBR (Exonuclease 1 n=3 Tax=Dekkera bruxellensis TaxID=5007 RepID=A0A7D9CV32_DEKBR)

HSP 1 Score: 65.1 bits (157), Expect = 5.680e-9
Identity = 62/195 (31.79%), Postives = 89/195 (45.64%), Query Frame = 0
Query:    1 MGVKDLLKALKEGASRQESFSRGDGL-LLIDGGFMLHKSLSRSGVACALYAGDTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESRLAEATTQQAQDKLMVQCVHFDARTVEKVSRAISA--RCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHG---NDSDLVVLGAKNLAWRI 189
            MGV  LL ALK       S  +  G  L ID    LHK +        L    TR  ++     V+  +      ++VFDG   P+KAGT +ERR RRQ+ + R  +A  +  + + M  C      T E     I    RC+++ + AP+E DSQ VYLE+          + G    DSDL+V G + L  ++
Sbjct:    1 MGVSGLLPALKS-IQTPISLEKYKGKRLAIDTYAWLHKGIFSCSPQLVL-GHPTRAYIDYVLRKVRMLRHFQIEPYLVFDGDHLPSKAGTEEERRKRRQTYKQRAIDALERHDRREAMGFCQKACDITPEMAKSLIEELKRCKIKYVVAPYEADSQMVYLEKS-------GLVDGIISEDSDLLVFGCQTLLTKM 186          
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: W4JWC7_HETIT (Exonuclease 1 n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4JWC7_HETIT)

HSP 1 Score: 62.4 bits (150), Expect = 3.520e-8
Identity = 65/200 (32.50%), Postives = 93/200 (46.50%), Query Frame = 0
Query:    1 MGVKDLLKALKEGASRQESFSRGDG-LLLIDGGFMLHKSLSRSGVACA--LYAG-DTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESR----LAEATTQQAQDKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHG---NDSDLVVLGAKNLAWRI 189
            MG+  LL  LK     Q+  S   G  L +DG   LH    R   ACA  L  G  TR  V+     V+  +  G   ++VFDG   PAK GT +ERR RR+    R     A+    QA++ L  +C+    +   +  +A+ A   V  + AP+E D+Q  YLE           + G    DSDL+V G KN+ +++
Sbjct:    1 MGISGLLPLLKS-IHVQKHLSEFSGQTLAVDGYVWLH----RGAYACATELATGRSTRKYVDYAMQRVRLLRHYGIQPYLVFDGGPLPAKRGTENERRERREENLMRGNALAAQGRHAQARE-LYCKCLDVTPQMAYQFIKALRAE-NVPYIVAPYEADAQLAYLERT-------GVVDGIITEDSDLLVFGCKNVLFKL 186          
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: A0A1E3QR87_9ASCO (Exonuclease 1 n=1 Tax=Babjeviella inositovora NRRL Y-12698 TaxID=984486 RepID=A0A1E3QR87_9ASCO)

HSP 1 Score: 62.8 bits (151), Expect = 3.560e-8
Identity = 64/197 (32.49%), Postives = 89/197 (45.18%), Query Frame = 0
Query:    1 MGVKDLLKALKEGASRQESFSRGDG-LLLIDGGFMLHKSLSRSGVACALYAGDTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESRLAE----ATTQQAQDKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQ---MGPRFHRCYIHGNDSDLVVLGAKNLAWRI 189
            MGV  LL A+K       +  R  G  L +D    LHKSL       A     T   V      V   +D G T ++VFDG   P KAGT  ER +RR+    + A+      T++A  K  ++C       V+ V + +  R  ++ + AP+E DSQ VYLE Q    G       I   DSDL+V G + L  ++
Sbjct:    1 MGVTGLLPAIKS-VQEPTTLQRYRGRTLAVDSYSWLHKSLMTCSFELA-QGMPTEKYVTYFMRRVTLLEDHGITPYLVFDGDHLPTKAGTERERAARREENRVKAADYARRGNTKEAY-KCYMKCADVTPAMVKSVIQVLKHR-GLQYVVAPYEADSQMVYLEAQGLVSG-------IVSEDSDLLVFGCRTLITKL 186          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVY6_9PHAE1.590e-1235.53Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G0K2_ECTSI7.220e-1235.57Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=... [more]
D7G4G5_ECTSI1.910e-1035.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZU5_ECTSI8.820e-1034.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8H6EV38_DEKBR2.020e-931.79Exonuclease 1 n=1 Tax=Dekkera bruxellensis TaxID=5... [more]
D8QEB2_SCHCM3.730e-927.98Exonuclease 1 n=2 Tax=Schizophyllaceae TaxID=5332 ... [more]
D7FZG7_ECTSI4.190e-931.41Exonuclease I Exo1 n=2 Tax=Ectocarpus siliculosus ... [more]
A0A7D9CV32_DEKBR5.680e-931.79Exonuclease 1 n=3 Tax=Dekkera bruxellensis TaxID=5... [more]
W4JWC7_HETIT3.520e-832.50Exonuclease 1 n=1 Tax=Heterobasidion irregulare (s... [more]
A0A1E3QR87_9ASCO3.560e-832.49Exonuclease 1 n=1 Tax=Babjeviella inositovora NRRL... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 90..110
NoneNo IPR availableGENE3D3.40.50.1010coord: 1..189
e-value: 1.4E-24
score: 88.6
IPR006085XPG N-terminalSMARTSM00485xpgn3coord: 1..100
e-value: 7.6E-4
score: 20.0
IPR006085XPG N-terminalPFAMPF00752XPG_Ncoord: 1..100
e-value: 1.7E-5
score: 25.2
IPR006084XPG/Rad2 endonucleasePANTHERPTHR11081FLAP ENDONUCLEASE FAMILY MEMBERcoord: 1..185
IPR032641Exonuclease 1PANTHERPTHR11081:SF8EXONUCLEASE 1coord: 1..185
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 2..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig902contigL-elsbetiae_contig902:26979..27545 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig902.18041.1mRNA_L-elsbetiae_contig902.18041.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig902 26979..27545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig902.18041.1 ID=prot_L-elsbetiae_contig902.18041.1|Name=mRNA_L-elsbetiae_contig902.18041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=189bp
MGVKDLLKALKEGASRQESFSRGDGLLLIDGGFMLHKSLSRSGVACALYA
GDTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSA
ESRLAEATTQQAQDKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEG
DSQFVYLEEQMGPRFHRCYIHGNDSDLVVLGAKNLAWRI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006085XPG_DNA_repair_N
IPR006084XPG/Rad2
IPR032641Exo1
IPR029060PIN-like_dom_sf