prot_L-elsbetiae_contig9017.18038.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9017.18038.1
Unique Nameprot_L-elsbetiae_contig9017.18038.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length127
Homology
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BLAST of mRNA_L-elsbetiae_contig9017.18038.1 vs. uniprot
Match: D8LMN3_ECTSI (CNOT1_TTP_bind domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN3_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 2.210e-57
Identity = 108/122 (88.52%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:    7 STGWYEADALALVPLFAEHASSTGEMNFLNKTSGAMSLAADVAGIASSIGQEGSLAGFLRDLGHTCCSSTASLRQAIRESGVVVDERQVAQVMTMLANNYNSPKGQG-DDGELSSALTSSLF 127
            S+ W EADALAL PLFAEHASS GEMNFLNKT GAMSLAADVAGIAS IG+ GSLAGFLRDLGHTCCS+ A+LRQAIRESGVVVDERQVAQVMTMLANNYNSPKGQG DDGE+SSALTSSLF
Sbjct:  292 SSAWLEADALALAPLFAEHASSVGEMNFLNKTQGAMSLAADVAGIASGIGRGGSLAGFLRDLGHTCCSTPAALRQAIRESGVVVDERQVAQVMTMLANNYNSPKGQGGDDGEISSALTSSLF 413
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BLAST of mRNA_L-elsbetiae_contig9017.18038.1 vs. uniprot
Match: A0A6H5JXN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN6_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 1.860e-56
Identity = 106/122 (86.89%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:    7 STGWYEADALALVPLFAEHASSTGEMNFLNKTSGAMSLAADVAGIASSIGQEGSLAGFLRDLGHTCCSSTASLRQAIRESGVVVDERQVAQVMTMLANNYNSPKGQG-DDGELSSALTSSLF 127
            S+ W EADALAL PLFAEHASS GEMNFLNKT GAMSLAADVAGIAS IG+ GSLAGFLRDLGHTCCS+ A+LRQAIRESGV+VDERQVAQVMTMLANNYNSPKGQG DDG++SSALTSSLF
Sbjct:  320 SSAWLEADALALAPLFAEHASSVGEMNFLNKTQGAMSLAADVAGIASGIGRGGSLAGFLRDLGHTCCSTPAALRQAIRESGVMVDERQVAQVMTMLANNYNSPKGQGGDDGDISSALTSSLF 441
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9017.18038.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMN3_ECTSI2.210e-5788.52CNOT1_TTP_bind domain-containing protein (Fragment... [more]
A0A6H5JXN6_9PHAE1.860e-5686.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9017contigL-elsbetiae_contig9017:4942..6590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9017.18038.1mRNA_L-elsbetiae_contig9017.18038.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9017 4942..6591 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9017.18038.1 ID=prot_L-elsbetiae_contig9017.18038.1|Name=mRNA_L-elsbetiae_contig9017.18038.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=127bp
AAAAAPSTGWYEADALALVPLFAEHASSTGEMNFLNKTSGAMSLAADVAG
IASSIGQEGSLAGFLRDLGHTCCSSTASLRQAIRESGVVVDERQVAQVMT
MLANNYNSPKGQGDDGELSSALTSSLF
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