prot_L-elsbetiae_contig9004.18028.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9004.18028.1
Unique Nameprot_L-elsbetiae_contig9004.18028.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length248
Homology
BLAST of mRNA_L-elsbetiae_contig9004.18028.1 vs. uniprot
Match: A0A6H5JMN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMN8_9PHAE)

HSP 1 Score: 426 bits (1094), Expect = 1.050e-147
Identity = 208/248 (83.87%), Postives = 226/248 (91.13%), Query Frame = 0
Query:    1 QTAIRGGGGEDGIRVLTREESEAAIVSYAASAKRHRPIESEYSEYIGMLQGMQSWGEALTKKRVGCKRMVLGNFRRGNLVCIAAAEVVWSTGYLSRDVRLSIPLLVVNPKYDMRKVGFETIKRMQKFGMQNALLLDLSALMEVPSLRVFCLESTQTLDEDPEGMFQDPLVQQYNSRVRRSCYVLDDIPKWADLGPYWYEGVLPRGVRFFFRKRFHAVNEFEVSITRPGAGLSTGSGTVGGARVIPMHE 248
            QT  RGGG EDGIR LTREESEAAI+S+A SAKRH   +SEY ++I +LQGM+SWG+ LT+KRVGCKR+VLGNF+RGNLVCIAAA+VVWSTGYLSRDVRLS+ L+ VNPKYDMRKVGFETIKRM+ FGMQNALLLDLS LM VP LRVFCLESTQTLDEDPEG+FQDPLVQQYNSRVRRSCYVLDDIP WADLGPYWYEGVLPR VRFFFRKRFHAVNEFEV++ RPGAGLSTGSGTVGGARVI M E
Sbjct:   86 QTTARGGG-EDGIRELTREESEAAILSFADSAKRHSRTQSEYDDHIELLQGMRSWGQPLTQKRVGCKRLVLGNFKRGNLVCIAAAQVVWSTGYLSRDVRLSLALIAVNPKYDMRKVGFETIKRMKSFGMQNALLLDLSPLMAVPRLRVFCLESTQTLDEDPEGVFQDPLVQQYNSRVRRSCYVLDDIPTWADLGPYWYEGVLPRSVRFFFRKRFHAVNEFEVTLQRPGAGLSTGSGTVGGARVIAMDE 332          
BLAST of mRNA_L-elsbetiae_contig9004.18028.1 vs. uniprot
Match: D8LH52_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH52_ECTSI)

HSP 1 Score: 423 bits (1088), Expect = 2.130e-147
Identity = 207/248 (83.47%), Postives = 226/248 (91.13%), Query Frame = 0
Query:    1 QTAIRGGGGEDGIRVLTREESEAAIVSYAASAKRHRPIESEYSEYIGMLQGMQSWGEALTKKRVGCKRMVLGNFRRGNLVCIAAAEVVWSTGYLSRDVRLSIPLLVVNPKYDMRKVGFETIKRMQKFGMQNALLLDLSALMEVPSLRVFCLESTQTLDEDPEGMFQDPLVQQYNSRVRRSCYVLDDIPKWADLGPYWYEGVLPRGVRFFFRKRFHAVNEFEVSITRPGAGLSTGSGTVGGARVIPMHE 248
            QT  RGGG EDGIR LTREESEAAI+S+A SAKRH   +S+Y ++I +LQGM+SWG+ LT+KRVGCKR+VLGNF+RGNLVCIAAA+VVWSTGYLSRDVRLS+ L+ VNPKYDMRKVGFETIKRM+ FGMQNALLLDLS LM VP LRVFCLESTQTLDEDPEG+FQDPLVQQYNSRVRRSCYVLDDIP WADLGPYWYEGVLPR VRFFFRKRFHAVNEFEV++ RPGAGLSTGSGTVGGARVI M E
Sbjct:   46 QTTARGGG-EDGIRELTREESEAAILSFADSAKRHCRTQSDYDDHIELLQGMRSWGQPLTQKRVGCKRVVLGNFKRGNLVCIAAAQVVWSTGYLSRDVRLSLALIAVNPKYDMRKVGFETIKRMKSFGMQNALLLDLSPLMTVPRLRVFCLESTQTLDEDPEGVFQDPLVQQYNSRVRRSCYVLDDIPTWADLGPYWYEGVLPRSVRFFFRKRFHAVNEFEVTLQRPGAGLSTGSGTVGGARVIAMDE 292          
BLAST of mRNA_L-elsbetiae_contig9004.18028.1 vs. uniprot
Match: A0A835YSI1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI1_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.270e-71
Identity = 120/245 (48.98%), Postives = 164/245 (66.94%), Query Frame = 0
Query:    6 GGGGEDGIRVLTREESEAAIVSYAASAKRHRPIESEYSEYIGMLQGMQSWGEALTK-KRVGCKRMVLGNFRRGNLVCIAAAEVVWSTGYLSRDVRLSIPLLVVNPKYDMRKVGFETIKRMQKFGMQNALLLDLSALMEVPSLRVFCLESTQTLDEDPEGMFQDPLVQQYNSRVRRSCYVLDDIPKWADLGPYWYEGVLPRGVRFFFRKRFHAV-NEFEVSITRPGAGLSTGSGTVGGARVIPMHE 248
            GGG  DG+R +T  + + A+ +Y A A ++    +E  E + M+  M+ W +   K KR+GCK+M LG++R G L+ +AA ++ W  G+  RDVR+ + LL +NP +D R VGFE ++ ++  G  NALLLD SAL EVP LRVF L S +TLD DPE +  DP    Y S V+R+C+VLD+IP+WADLGP+W+EG    GV F+FRKR   + NEFE+S   P AG +TGSGTVGGARVI + E
Sbjct:   10 GGGDGDGLRPMTAAQVKEALANYKAGAFKYCQSSAEQKEQLEMISMMREWADTFEKYKRIGCKKMTLGSYRAGRLLSVAALQIEWR-GFPERDVRMVVRLLALNPMHDKRIVGFEMMESLKALGRDNALLLDCSALREVPCLRVFALGSIRTLDADPELV--DPRKLFYKSHVKRTCFVLDNIPEWADLGPFWFEGTTHDGVSFWFRKRTPMLLNEFEISWDHPKAGNATGSGTVGGARVIGIGE 251          
BLAST of mRNA_L-elsbetiae_contig9004.18028.1 vs. uniprot
Match: A0A0G4EB14_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EB14_VITBC)

HSP 1 Score: 97.1 bits (240), Expect = 8.820e-20
Identity = 72/252 (28.57%), Postives = 124/252 (49.21%), Query Frame = 0
Query:   11 DGIRVLTREESEAAIVSYAASAKRHRPIESE------------YSEYIGMLQGMQSWGEALTKKRVGCKRMVLGNFRRGNLVCIAAAEVVWSTGYLSRDVRLSIPLLVVNPKY--DMRKVGFETIKRMQKFGMQNALLLDLSALMEVPSLRVFCLE-STQTLDEDPEGMFQDPLVQQYNSRVRRSCYVLDDIPKWADLGPYWYEGVLPRGVRFFFRKRFHAVNEFEVSITRPGAGLS-TGSGTVGGARVIPM 246
            DG+RVL++EE+ +A   +         +                S+ + +L  M+ W  +L  + +   R  +G F    L  I    +    G  S    + +  + +NP +  +  +   + ++ +++ G +NA+++DL+AL + PSL  F L+ S  TLD +P  +  DP V ++ + +R     +D    W DL  YW++     G  F+FR+RF +  EFEV    P  G+S TGSGTVGGA ++P+
Sbjct:   66 DGLRVLSQEEALSATERWLQVLTIGSSLSDTDDGSGAGGRGAVTSDEVDVLVRMRQWAGSL--EAMHRNRRCVGWFCSHRLRAIGCLHI----GRSSSINTMKLIYMALNPTFPGERDRAALDLLREIRELGKENAMIVDLTALKDFPSLMKFWLDGSFTTLDIEP--VTNDPRVVRHKALLRSPTLTIDG--PWPDLPFYWFQSECDDGCAFYFRRRFRSNTEFEVLFEPPRVGVSMTGSGTVGGALIVPL 307          
BLAST of mRNA_L-elsbetiae_contig9004.18028.1 vs. uniprot
Match: A0A0G4EDF6_VITBC (Uncharacterized protein (Fragment) n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EDF6_VITBC)

HSP 1 Score: 67.0 bits (162), Expect = 3.680e-10
Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 0
Query:  153 STQTLDEDPEGMFQDPLVQQYNSRVRRSCYVLDDIPKWADLGPYWYEGVLPRGVRFFFRKRFHAVNEFEVSITRPGAGLS-TGSGTVGGARVIPM 246
            S  TLD +P  +  DP V ++ + +R     +D    W DL  YW++     G  F+FR+RF +  EFEV    P  G+S TGSGTVGGA ++P+
Sbjct:    2 SFTTLDIEP--VTNDPRVVRHKALLRSPTLTIDG--PWPDLPFYWFQSECDDGCAFYFRRRFRSNTEFEVLFEPPRVGVSMTGSGTVGGALIVPL 92          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9004.18028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JMN8_9PHAE1.050e-14783.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH52_ECTSI2.130e-14783.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YSI1_9STRA1.270e-7148.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4EB14_VITBC8.820e-2028.57Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A0G4EDF6_VITBC3.680e-1040.00Uncharacterized protein (Fragment) n=1 Tax=Vitrell... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9004contigL-elsbetiae_contig9004:365..5499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9004.18028.1mRNA_L-elsbetiae_contig9004.18028.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9004 365..5499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9004.18028.1 ID=prot_L-elsbetiae_contig9004.18028.1|Name=mRNA_L-elsbetiae_contig9004.18028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=248bp
QTAIRGGGGEDGIRVLTREESEAAIVSYAASAKRHRPIESEYSEYIGMLQ
GMQSWGEALTKKRVGCKRMVLGNFRRGNLVCIAAAEVVWSTGYLSRDVRL
SIPLLVVNPKYDMRKVGFETIKRMQKFGMQNALLLDLSALMEVPSLRVFC
LESTQTLDEDPEGMFQDPLVQQYNSRVRRSCYVLDDIPKWADLGPYWYEG
VLPRGVRFFFRKRFHAVNEFEVSITRPGAGLSTGSGTVGGARVIPMHE
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