prot_L-elsbetiae_contig90.18014.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig90.18014.1
Unique Nameprot_L-elsbetiae_contig90.18014.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length192
Homology
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: A0A6H5LB71_9PHAE (PC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB71_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 6.830e-51
Identity = 110/203 (54.19%), Postives = 137/203 (67.49%), Query Frame = 0
Query:    1 MQRLGWSAKRCGRRNLT-HTLS--RLSSSSTGSEHDDFWTEAQTEAKTTPAYQQAA-RASSDTP-SRFVDGDQWAAPGNFGPGRMPMGQAYGPSTS----GDRNNSGPPPFTPSTNTLDPHQRHL--PEPPFDMLSSMHLSPVKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREIEQ 192
            MQR G SA+R G  +L  H+ S  +LSS S+G EHDDFWT A+TEA+ TPAYQQAA  A++ TP +    GD+WA PG   PG MPMG+AY PS+S    G R++S       S+NT +        P P FDM SS HLSPV+QVDVR+FKG  LVDIRQYF+  +G+   TKKG ALT+PQWRRLQ AM DID ++  +E+
Sbjct:    1 MQRFGVSARRRGFPSLLIHSSSSRKLSSFSSGPEHDDFWTAAKTEAQATPAYQQAAANATAPTPWTPTATGDRWAQPGGPSPGTMPMGEAYKPSSSSKMYGGRSSSS---NGRSSNTFNSDSGDFVPPPPTFDMQSSTHLSPVRQVDVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEIFALEE 200          
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: D7FYS7_ECTSI (PC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS7_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 2.160e-22
Identity = 45/70 (64.29%), Postives = 55/70 (78.57%), Query Frame = 0
Query:  123 MLSSMHLSPVKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREIEQ 192
            M SSMHLSPV+Q DVR FKG  LVDIRQYF+  +G+ + TKKG ALT+PQWRRLQ AM DID ++  +E+
Sbjct:    1 MQSSMHLSPVRQADVRLFKGRPLVDIRQYFRGAEGQAAPTKKGIALTIPQWRRLQEAMADIDKEIFALEE 70          
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: A0A1X7U2Q5_AMPQE (PC4 domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U2Q5_AMPQE)

HSP 1 Score: 64.7 bits (156), Expect = 3.030e-10
Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 0
Query:  129 LSPVKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKL 187
            LS  + V+VRTFKG +++DIR+Y+ NDDG     KKG +L+V QW +L+ AM  ID ++
Sbjct:   51 LSAKRFVNVRTFKGRIMIDIREYYVNDDGENRPGKKGISLSVDQWEKLKEAMETIDERI 109          
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: A0A7M7G0M9_STRPU (PC4 domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7G0M9_STRPU)

HSP 1 Score: 63.9 bits (154), Expect = 6.380e-10
Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 0
Query:  122 DMLSSMHLSPVKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREI 190
            D      LS  + V+VR F+G VL+DIR+Y++ + G +   KKG +LTV QWR+L + + DIDS++ E+
Sbjct:   46 DTSEMFSLSRQRFVNVREFRGKVLIDIREYYEKEVGDLLPGKKGISLTVDQWRKLVSQVDDIDSRIEEM 114          
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: UPI001455409E (activated RNA polymerase II transcriptional coactivator p15-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455409E)

HSP 1 Score: 63.5 bits (153), Expect = 1.070e-9
Identity = 28/66 (42.42%), Postives = 46/66 (69.70%), Query Frame = 0
Query:  128 HLSPVKQ---VDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREI 190
            H+ P+ +   V+VR F+G VL+DIR+Y+ ++ G +   KKG +LTV QW +L+ AM D++  +RE+
Sbjct:   57 HMYPLARQRFVNVREFRGKVLIDIREYYTDNSGELKPGKKGISLTVEQWEKLKDAMEDVNDSVREL 122          
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: A0A1B6KUG9_9HEMI (PC4 domain-containing protein n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6KUG9_9HEMI)

HSP 1 Score: 62.0 bits (149), Expect = 2.570e-9
Identity = 26/69 (37.68%), Postives = 46/69 (66.67%), Query Frame = 0
Query:  122 DMLSSMHLSPVKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREI 190
            D + S H+  +K + VRTFKG V +DIR+Y++ + G +   KKG +LT PQW+++   + D++  L+++
Sbjct:   36 DDIESFHIEGMKYLKVRTFKGKVFIDIREYYEAN-GDLKPGKKGISLTAPQWKKVVGLVDDVEEALKKV 103          
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: A0A8C5L2B5_JACJA (Activated RNA polymerase II transcriptional coactivator p15 n=3 Tax=Jaculus jaculus TaxID=51337 RepID=A0A8C5L2B5_JACJA)

HSP 1 Score: 62.4 bits (150), Expect = 3.210e-9
Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 0
Query:  132 VKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREI 190
            +K V VR FKG VL+DIR+Y+ N DG +   +KG AL+  QW +L+  + DID  +R++
Sbjct:   69 MKYVSVREFKGNVLIDIREYWMNQDGEMKPGRKGIALSPEQWSQLKEQISDIDDAVRKL 127          
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: UPI001BB2BB0F (activated RNA polymerase II transcriptional coactivator p15-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2BB0F)

HSP 1 Score: 61.6 bits (148), Expect = 4.360e-9
Identity = 29/69 (42.03%), Postives = 46/69 (66.67%), Query Frame = 0
Query:  122 DMLSSMHLSPVKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREI 190
            D  +   LS  + V+VR F+G VL+DIR+Y++ + G +   KKG +LTV QWR+L   + DID+++ E+
Sbjct:   42 DTSNMFSLSRQRFVNVREFRGKVLIDIREYYEPEVGDLRPGKKGISLTVDQWRKLVNQIDDIDARIEEM 110          
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: A0A4Z2EKN8_9TELE (Activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Liparis tanakae TaxID=230148 RepID=A0A4Z2EKN8_9TELE)

HSP 1 Score: 61.6 bits (148), Expect = 6.130e-9
Identity = 28/59 (47.46%), Postives = 38/59 (64.41%), Query Frame = 0
Query:  132 VKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREI 190
            ++ V VR FKG VLVDIR+Y+ N DG +   KKG +L   QW +L+  M DID  ++ I
Sbjct:   68 MRYVSVREFKGKVLVDIREYWMNQDGEMKPGKKGISLNPEQWTQLKDQMSDIDEAMKRI 126          
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: G3NII5_GASAC (Activated RNA polymerase II transcriptional coactivator p15 n=3 Tax=Gasterosteidae TaxID=69291 RepID=G3NII5_GASAC)

HSP 1 Score: 61.6 bits (148), Expect = 7.150e-9
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0
Query:  132 VKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREI 190
            ++ V VR FKG VL+DIR+Y+ N DG +   KKG +L   QW +L+  M DID  ++ I
Sbjct:   75 MRYVSVRDFKGKVLIDIREYWMNQDGEMKPGKKGISLNPEQWNQLKDQMSDIDDAMKRI 133          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LB71_9PHAE6.830e-5154.19PC4 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FYS7_ECTSI2.160e-2264.29PC4 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A1X7U2Q5_AMPQE3.030e-1049.15PC4 domain-containing protein n=1 Tax=Amphimedon q... [more]
A0A7M7G0M9_STRPU6.380e-1043.48PC4 domain-containing protein n=1 Tax=Strongylocen... [more]
UPI001455409E1.070e-942.42activated RNA polymerase II transcriptional coacti... [more]
A0A1B6KUG9_9HEMI2.570e-937.68PC4 domain-containing protein n=1 Tax=Graphocephal... [more]
A0A8C5L2B5_JACJA3.210e-945.76Activated RNA polymerase II transcriptional coacti... [more]
UPI001BB2BB0F4.360e-942.03activated RNA polymerase II transcriptional coacti... [more]
A0A4Z2EKN8_9TELE6.130e-947.46Activated RNA polymerase II transcriptional coacti... [more]
G3NII5_GASAC7.150e-945.76Activated RNA polymerase II transcriptional coacti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003173Transcriptional coactivator p15 (PC4)PFAMPF02229PC4coord: 128..178
e-value: 1.7E-14
score: 53.2
IPR009044ssDNA-binding transcriptional regulatorGENE3D2.30.31.10coord: 125..190
e-value: 5.4E-18
score: 66.2
IPR009044ssDNA-binding transcriptional regulatorSUPERFAMILY54447ssDNA-binding transcriptional regulator domaincoord: 128..189
NoneNo IPR availablePANTHERPTHR13215RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATORcoord: 33..191
NoneNo IPR availablePANTHERPTHR13215:SF0ACTIVATED RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR P15coord: 33..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig90contigL-elsbetiae_contig90:42404..42979 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig90.18014.1mRNA_L-elsbetiae_contig90.18014.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig90 42404..42979 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig90.18014.1 ID=prot_L-elsbetiae_contig90.18014.1|Name=mRNA_L-elsbetiae_contig90.18014.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=192bp
MQRLGWSAKRCGRRNLTHTLSRLSSSSTGSEHDDFWTEAQTEAKTTPAYQ
QAARASSDTPSRFVDGDQWAAPGNFGPGRMPMGQAYGPSTSGDRNNSGPP
PFTPSTNTLDPHQRHLPEPPFDMLSSMHLSPVKQVDVRTFKGTVLVDIRQ
YFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREIEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003173PC4
IPR009044ssDNA-bd_transcriptional_reg