prot_L-elsbetiae_contig8924.17940.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8924.17940.1
Unique Nameprot_L-elsbetiae_contig8924.17940.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length160
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig8924.17940.1 vs. uniprot
Match: A0A6H5JZH0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZH0_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 1.100e-41
Identity = 88/175 (50.29%), Postives = 110/175 (62.86%), Query Frame = 0 
Query:    1 MSLIESNVRVENRLYHQSYH-------PPGRGDRETICVRADEGPYALTAAELASIESSKTREKLKTKADHVAQFHRKVVRRLAAEKRAAESCARGGKTINARIGSIDSFA---DVLESSRFTLEEEQRVLWE------QAPCYRVVKIIGERGDKGSLSDADTDARMTLAAYRR 159
            MSLIES +R E R+   S           GR     +    ++GP  L+AA+LAS ES KTR+KLK KADHVA+FHRKVVRRLA EKRAA +  RGG+ + A+IGS DSFA   D LE       E Q    E      +AP ++ +K+IG RG KGSL+DADT++RM LAAYR+
Sbjct:    1 MSLIESYIRAEERVRQASSRFGSVVGETHGRSVTVVVAAADNDGPCGLSAADLASFESEKTRDKLKLKADHVAKFHRKVVRRLATEKRAAHAHTRGGRAVKAQIGSADSFANFGDRLEPRGLAPREAQGTPREHTLPRDEAPNFQAIKVIGVRGHKGSLADADTESRMALAAYRQ 175
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8924.17940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JZH0_9PHAE1.100e-4150.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8924contigL-elsbetiae_contig8924:1992..5956 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8924.17940.1mRNA_L-elsbetiae_contig8924.17940.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8924 1992..5956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8924.17940.1 ID=prot_L-elsbetiae_contig8924.17940.1|Name=mRNA_L-elsbetiae_contig8924.17940.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=160bp
MSLIESNVRVENRLYHQSYHPPGRGDRETICVRADEGPYALTAAELASIE
SSKTREKLKTKADHVAQFHRKVVRRLAAEKRAAESCARGGKTINARIGSI
DSFADVLESSRFTLEEEQRVLWEQAPCYRVVKIIGERGDKGSLSDADTDA
RMTLAAYRR*
back to top