prot_L-elsbetiae_contig8873.17898.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8873.17898.1
Unique Nameprot_L-elsbetiae_contig8873.17898.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length50
Homology
BLAST of mRNA_L-elsbetiae_contig8873.17898.1 vs. uniprot
Match: D7FN46_ECTSI (50S ribosomal protein L5, chloroplastic n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN46_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 2.370e-26
Identity = 48/49 (97.96%), Postives = 49/49 (100.00%), Query Frame = 0
Query:    1 MDFYVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIVTG 49
            MDF+VVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIVTG
Sbjct:  125 MDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIVTG 173          
BLAST of mRNA_L-elsbetiae_contig8873.17898.1 vs. uniprot
Match: E1ZG05_CHLVA (Ribosomal_L5 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZG05_CHLVA)

HSP 1 Score: 78.2 bits (191), Expect = 9.470e-17
Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    1 MDFYVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 47
            MDFYVVL RPGYRVA+R+ + AK+G QH+VTK DA+KWFQ KFEG+V
Sbjct:  132 MDFYVVLERPGYRVARRRKQLAKVGVQHRVTKDDAIKWFQQKFEGVV 178          
BLAST of mRNA_L-elsbetiae_contig8873.17898.1 vs. uniprot
Match: A0A087SET3_AUXPR (60S ribosomal protein L11-1 n=5 Tax=Chlorellaceae TaxID=35461 RepID=A0A087SET3_AUXPR)

HSP 1 Score: 76.6 bits (187), Expect = 3.390e-16
Identity = 33/47 (70.21%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    1 MDFYVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 47
            MDFYVVL RPGYRVAKR+ + A++G QH+VTK DA+KWFQ +FEG+V
Sbjct:  127 MDFYVVLERPGYRVAKRRKQLARVGVQHRVTKDDAMKWFQTRFEGVV 173          
BLAST of mRNA_L-elsbetiae_contig8873.17898.1 vs. uniprot
Match: A0A061SAW5_9CHLO (Large subunit ribosomal protein L11e n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SAW5_9CHLO)

HSP 1 Score: 75.1 bits (183), Expect = 1.290e-15
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    1 MDFYVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 47
            MDFYVVL RPGYRV +R+ + +++G QH+VTK DA+KWFQ+KFEGIV
Sbjct:  127 MDFYVVLERPGYRVGRRRQRHSRVGVQHRVTKEDAIKWFQSKFEGIV 173          
BLAST of mRNA_L-elsbetiae_contig8873.17898.1 vs. uniprot
Match: A1DU38_ARTSF (Ribosomal protein L11 (Fragment) n=1 Tax=Artemia franciscana TaxID=6661 RepID=A1DU38_ARTSF)

HSP 1 Score: 72.0 bits (175), Expect = 2.170e-15
Identity = 29/47 (61.70%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    1 MDFYVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 47
            +D+YVVL RPG+RVA+R+ K  K+G+QHK+TK DA+KWFQ K++GI+
Sbjct:   32 LDYYVVLGRPGFRVAERRKKTGKVGHQHKLTKEDAMKWFQQKYDGII 78          
BLAST of mRNA_L-elsbetiae_contig8873.17898.1 vs. uniprot
Match: A0A383V6F3_TETOB (Uncharacterized protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383V6F3_TETOB)

HSP 1 Score: 74.3 bits (181), Expect = 2.670e-15
Identity = 31/47 (65.96%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    1 MDFYVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 47
            MDFYVVL RPG+RVA+R+A  A++G QH+++K DA+KWFQ KFEG+V
Sbjct:  127 MDFYVVLERPGFRVARRRAPRARVGVQHRISKEDAIKWFQTKFEGVV 173          
BLAST of mRNA_L-elsbetiae_contig8873.17898.1 vs. uniprot
Match: F0YKV5_AURAN (50S ribosomal protein L5, chloroplastic n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKV5_AURAN)

HSP 1 Score: 73.9 bits (180), Expect = 4.070e-15
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 MDFYVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIVTG 49
            MDFYV L RPG+RVA+RKA+  K+G +HK+ K DA+KWFQ K+EGIV G
Sbjct:  136 MDFYVCLERPGFRVARRKARQGKVGIKHKIQKEDAIKWFQQKYEGIVLG 184          
BLAST of mRNA_L-elsbetiae_contig8873.17898.1 vs. uniprot
Match: I0YXL9_COCSC (Ribosomal protein L5 n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YXL9_COCSC)

HSP 1 Score: 73.6 bits (179), Expect = 5.310e-15
Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 MDFYVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 47
            MDFYVVL R GYRVA+R+ + AK+G QH+V K DA+KWFQ KFEGIV
Sbjct:  127 MDFYVVLERAGYRVARRRQRLAKVGVQHRVGKDDAIKWFQTKFEGIV 173          
BLAST of mRNA_L-elsbetiae_contig8873.17898.1 vs. uniprot
Match: A0A0K9NLH5_ZOSMR (60S ribosomal protein L11a n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NLH5_ZOSMR)

HSP 1 Score: 73.6 bits (179), Expect = 5.310e-15
Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 MDFYVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 47
            MDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:  126 MDFYVVLERPGYRVARRRRAKARVGIQHRVTKDDAMKWFQVKYEGVI 172          
BLAST of mRNA_L-elsbetiae_contig8873.17898.1 vs. uniprot
Match: A0A3P6F0I7_BRAOL (Uncharacterized protein n=4 Tax=Brassica TaxID=3705 RepID=A0A3P6F0I7_BRAOL)

HSP 1 Score: 72.8 bits (177), Expect = 8.990e-15
Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 MDFYVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIV 47
            MDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:  117 MDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 163          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8873.17898.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN46_ECTSI2.370e-2697.9650S ribosomal protein L5, chloroplastic n=2 Tax=Ec... [more]
E1ZG05_CHLVA9.470e-1772.34Ribosomal_L5 domain-containing protein n=1 Tax=Chl... [more]
A0A087SET3_AUXPR3.390e-1670.2160S ribosomal protein L11-1 n=5 Tax=Chlorellaceae ... [more]
A0A061SAW5_9CHLO1.290e-1568.09Large subunit ribosomal protein L11e n=1 Tax=Tetra... [more]
A1DU38_ARTSF2.170e-1561.70Ribosomal protein L11 (Fragment) n=1 Tax=Artemia f... [more]
A0A383V6F3_TETOB2.670e-1565.96Uncharacterized protein n=2 Tax=Scenedesmaceae Tax... [more]
F0YKV5_AURAN4.070e-1565.3150S ribosomal protein L5, chloroplastic n=2 Tax=Au... [more]
I0YXL9_COCSC5.310e-1570.21Ribosomal protein L5 n=2 Tax=Coccomyxa TaxID=41891... [more]
A0A0K9NLH5_ZOSMR5.310e-1565.9660S ribosomal protein L11a n=1 Tax=Zostera marina ... [more]
A0A3P6F0I7_BRAOL8.990e-1565.96Uncharacterized protein n=4 Tax=Brassica TaxID=370... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022803Ribosomal protein L5 domain superfamilyGENE3D3.30.1440.10coord: 1..49
e-value: 2.4E-14
score: 55.4
IPR022803Ribosomal protein L5 domain superfamilySUPERFAMILY55282RL5-likecoord: 1..47
NoneNo IPR availablePANTHERPTHR11994:SF1960S RIBOSOMAL PROTEIN L11-2coord: 1..47
IPR002132Ribosomal protein L5PANTHERPTHR1199460S RIBOSOMAL PROTEIN L11-RELATEDcoord: 1..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8873contigL-elsbetiae_contig8873:528..852 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8873.17898.1mRNA_L-elsbetiae_contig8873.17898.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8873 516..927 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8873.17898.1 ID=prot_L-elsbetiae_contig8873.17898.1|Name=mRNA_L-elsbetiae_contig8873.17898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=50bp
MDFYVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIVTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022803Ribosomal_L5_dom_sf
IPR002132Ribosomal_L5