prot_L-elsbetiae_contig8862.17885.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8862.17885.1
Unique Nameprot_L-elsbetiae_contig8862.17885.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length351
Homology
BLAST of mRNA_L-elsbetiae_contig8862.17885.1 vs. uniprot
Match: D7G2T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T0_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 3.300e-46
Identity = 159/344 (46.22%), Postives = 197/344 (57.27%), Query Frame = 0
Query:    1 QALLALSWLAAKARLFHAYEQAGLVSPLPPEQQQQDCQRDYEQXXXXXXXXXXLPFPTDLSEAPEVVRHSRDVFVSWGDSSRRGGLRRATPRDWGGPGGKEEAVRMGEAGTKGERLARALGASREMMCCYGGLEGELRVVQGLEAAREKMLLRMQRLHAEITASRPATHGGPAXXXXXXXXXXXXXXXXXXXXXXTLATLGGGASGARSGQLRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPTGLSTRLSASRR----QPTTRTR-------KNTASSRTLLSPFCLSLLGSRSAEKVSLSLEAVSRARAALEGLEEGRGHSGRWCRWVFSALAAADS 333
            + LLALSW+ AKA++F A+EQA LVSPLP      +    + +           PFP D+SE PEV R S + F ++  +    G R   P DWGG  GKEE VRMGEA  KGE +ARALGA+REMM CYGGLEGELRVV+GLE AR++MLLRM+ L  ++  S+P +                                G  A+  R+ + R E XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   QPTT+T        +   + R  +SPFCL L+  R   ++S SL  V+RAR  L+ L+EGR H+GRWCRW  SAL AA+S
Sbjct:  150 EVLLALSWMMAKAKVFPAFEQARLVSPLPTTTPATNPTPPHGENVSASSPTPP-PFPRDVSETPEVRRVSAEAFAAFLATE---GRRSVPPPDWGGRLGKEEGVRMGEAEAKGEGMARALGAAREMMSCYGGLEGELRVVEGLETARQRMLLRMRSLFRDVAESQPGS--------------------------------GKVAASPRTTEARPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTTKTTSRCQRPSRKKCTPRAEVSPFCLCLVACRPPGELSRSLAKVTRAREVLDALDEGREHAGRWCRWASSALVAAES 457          
BLAST of mRNA_L-elsbetiae_contig8862.17885.1 vs. uniprot
Match: A0A6H5KBF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF2_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 3.700e-44
Identity = 158/331 (47.73%), Postives = 191/331 (57.70%), Query Frame = 0
Query:    3 LLALSWLAAKARLFHAYEQAGLVSPLPPEQQQQDCQRDYEQXXXXXXXXXXLPFPTDLSEAPEVVRHSRDVFVSWGDSSRRGGLRRATPRDWGGPGGKEEAVRMGEAGTKGERLARALGASREMMCCYGGLEGELRVVQGLEAAREKMLLRMQRLHAEITASRPATHGGPAXXXXXXXXXXXXXXXXXXXXXXTLATLGGGASGARSGQLRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPTGLSTRLSASRRQPTTRTRKNTASSRTLLSPFCLSLLGSRSAEKVSLSLEAVSRARAALEGLEEGRGHSGRWCRWVFSALAAADS 333
            LLALSW+ AKA+ F A+EQ+ LVSPLP +            XXXXXXXXXX  FP D+SE PEV R S + F ++  +  R   R   P DWGG  GKEEAVRMGEA  KGE +ARALGA+REMM CYGGLE ELRVV+GLE AR++ML RM+ L  ++  S P + G  A              XXXXXXXX         S +R+G             XXXXXXXXX                    T  +ASR Q  +R +K+T  +    SPFCL L+  RS  ++S SL  VSRAR  L+ L+EGR H+GRWCRW  SAL AA+S
Sbjct:  422 LLALSWMMAKAKAFPAFEQSRLVSPLPTKTPANPTPPQGG-XXXXXXXXXXXXFPRDVSETPEVRRVSAEAFAAFLAAEER---RSVPPPDWGGRLGKEEAVRMGEAEAKGEGMARALGAAREMMSCYGGLEAELRVVEGLETARQRMLRRMRSLFRDVAESHPGS-GKVAASLRTIETGPGYQQXXXXXXXXXXXXXPSAMSTSRAGTADATAMPGRAGAXXXXXXXXXSATQP---------------TTKTASRCQRPSR-KKHTPPAEA--SPFCLCLVAGRSPGELSRSLAKVSRAREVLDALDEGREHAGRWCRWASSALVAAES 729          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8862.17885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2T0_ECTSI3.300e-4646.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBF2_9PHAE3.700e-4447.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 212..237
NoneNo IPR availableCOILSCoilCoilcoord: 140..160
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..351
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.515

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8862contigL-elsbetiae_contig8862:4732..8081 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8862.17885.1mRNA_L-elsbetiae_contig8862.17885.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8862 4732..8081 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8862.17885.1 ID=prot_L-elsbetiae_contig8862.17885.1|Name=mRNA_L-elsbetiae_contig8862.17885.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=351bp
QALLALSWLAAKARLFHAYEQAGLVSPLPPEQQQQDCQRDYEQHQQQQQQ
QQPLPFPTDLSEAPEVVRHSRDVFVSWGDSSRRGGLRRATPRDWGGPGGK
EEAVRMGEAGTKGERLARALGASREMMCCYGGLEGELRVVQGLEAAREKM
LLRMQRLHAEITASRPATHGGPAATHGGPAATHGGPAATHGGPAATLATL
GGGASGARSGQLRLEQLRLAQQQQQQQQQQQQEERRQAPRASAPAATPTG
LSTRLSASRRQPTTRTRKNTASSRTLLSPFCLSLLGSRSAEKVSLSLEAV
SRARAALEGLEEGRGHSGRWCRWVFSALAAADSEIAAAAPAAAAAAAARV
G
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