prot_L-elsbetiae_contig8816.17847.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8816.17847.1
Unique Nameprot_L-elsbetiae_contig8816.17847.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length168
Homology
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BLAST of mRNA_L-elsbetiae_contig8816.17847.1 vs. uniprot
Match: A0A6H5K8E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8E9_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 3.990e-80
Identity = 130/164 (79.27%), Postives = 144/164 (87.80%), Query Frame = 0 
Query:    6 AAGGLPEVKMAKRGEVLEDGVIGTDEAREAKIDETLRKLGVQGISEVRKEQAEEEK--KSVGQQITSIFDLIPAETQLVMERVFIVGFVLCLVFLVFCGCAIGVEAYFLSTQGKLPPDLDDFIVHKLEPLFTPSLGLTFLFSSCLGVLKLGQMGQESVVYREDD 167
            + GG  +VK AKRGE+L+DG IG+D+AREAKI+ETLRK+GVQ I +VR  +A+E+K  KSVGQQITSIFDLIP ETQLVMERVFI GF +CL+FLV CGCAIGVEAYFLST GKLPPDLD FIV  LEPLFTPSLG TFLFSSCLGVLKLGQMGQESVVYREDD
Sbjct:  121 SGGGFADVKTAKRGEILQDGAIGSDDAREAKIEETLRKMGVQSIGQVRAAKAKEDKENKSVGQQITSIFDLIPPETQLVMERVFIAGFAVCLLFLVACGCAIGVEAYFLSTNGKLPPDLDKFIVGTLEPLFTPSLGATFLFSSCLGVLKLGQMGQESVVYREDD 284
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8816.17847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K8E9_9PHAE3.990e-8079.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 155..167
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..132
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..154
NoneNo IPR availableTMHMMTMhelixcoord: 90..112
NoneNo IPR availableTMHMMTMhelixcoord: 132..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8816contigL-elsbetiae_contig8816:2399..5159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8816.17847.1mRNA_L-elsbetiae_contig8816.17847.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8816 2308..6498 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8816.17847.1 ID=prot_L-elsbetiae_contig8816.17847.1|Name=mRNA_L-elsbetiae_contig8816.17847.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=168bp
MMGGTAAGGLPEVKMAKRGEVLEDGVIGTDEAREAKIDETLRKLGVQGIS
EVRKEQAEEEKKSVGQQITSIFDLIPAETQLVMERVFIVGFVLCLVFLVF
CGCAIGVEAYFLSTQGKLPPDLDDFIVHKLEPLFTPSLGLTFLFSSCLGV
LKLGQMGQESVVYREDD*
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