prot_L-elsbetiae_contig8814.17846.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8814.17846.1
Unique Nameprot_L-elsbetiae_contig8814.17846.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length38
Homology
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BLAST of mRNA_L-elsbetiae_contig8814.17846.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 47.8 bits (112), Expect = 3.910e-5
Identity = 21/37 (56.76%), Postives = 27/37 (72.97%), Query Frame = 0 
Query:    1 MTTFPGGTIFDGNEAENCPDVNNANVFDGNNENCPVV 37
            +TTFP  T+F+ N A+ CPDV     FDG+N+NCPVV
Sbjct:  350 VTTFPDDTVFEDNRADFCPDV-----FDGDNDNCPVV 381
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8814.17846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJ44_ECTSI3.910e-556.76Asn/thr-rich large protein family protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8814contigL-elsbetiae_contig8814:4984..5936 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8814.17846.1mRNA_L-elsbetiae_contig8814.17846.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8814 4899..6012 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8814.17846.1 ID=prot_L-elsbetiae_contig8814.17846.1|Name=mRNA_L-elsbetiae_contig8814.17846.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=38bp
MTTFPGGTIFDGNEAENCPDVNNANVFDGNNENCPVV*
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