prot_L-elsbetiae_contig88.17830.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig88.17830.1 vs. uniprot
Match: A0A6H5J6Y2_9PHAE (60S ribosomal export protein NMD3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Y2_9PHAE) HSP 1 Score: 181 bits (458), Expect = 4.050e-56 Identity = 81/92 (88.04%), Postives = 86/92 (93.48%), Query Frame = 0 Query: 17 MANILCCLCGRSIQPNGANMCGPCLREQVDVTEDIPKKGLVVIQCRRCLKWLTKNEHWSAFELESAPFLALVLKKIPGLAKQDLVDAKWIWT 108 +A ILCCLCGR IQPNGANMCG CL++QVDVTE IPKKGL +IQCRRCLKWLTKN+HWS FELESAPFLALVLKKIPGLAKQDLVDAKWIWT Sbjct: 61 LATILCCLCGRPIQPNGANMCGACLQDQVDVTEGIPKKGLTIIQCRRCLKWLTKNDHWSGFELESAPFLALVLKKIPGLAKQDLVDAKWIWT 152
BLAST of mRNA_L-elsbetiae_contig88.17830.1 vs. uniprot
Match: D7G1R1_ECTSI (60S ribosomal export protein NMD3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1R1_ECTSI) HSP 1 Score: 182 bits (462), Expect = 1.290e-52 Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0 Query: 17 MANILCCLCGRSIQPNGANMCGPCLREQVDVTEDIPKKGLVVIQCRRCLKWLTKNEHWSAFELESAPFLALVLKKIPGLAKQDLVDAKWIWT 108 +A ILCCLCGR IQPNGANMCG CLR+QVDVTE IPKKGL +IQCRRCLKWLTKN+HWS FELESAPFLALVLKKIPGLAKQDLVDAKWIWT Sbjct: 60 LATILCCLCGRPIQPNGANMCGACLRDQVDVTEGIPKKGLTIIQCRRCLKWLTKNDHWSGFELESAPFLALVLKKIPGLAKQDLVDAKWIWT 151
BLAST of mRNA_L-elsbetiae_contig88.17830.1 vs. uniprot
Match: A0A836CPD6_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPD6_9STRA) HSP 1 Score: 127 bits (318), Expect = 3.550e-32 Identity = 55/89 (61.80%), Postives = 71/89 (79.78%), Query Frame = 0 Query: 20 ILCCLCGRSIQPNGANMCGPCLREQVDVTEDIPKKGLVVIQCRRCLKWLTKNEHWSAFELESAPFLALVLKKIPGLAKQDLVDAKWIWT 108 ILCCLCG+SIQPN A +CG CLR +VD+TE+I +KGL V QCR+CL+W KN+H+ +LES LAL LK+IPGL+K D+VDA ++WT Sbjct: 9 ILCCLCGKSIQPNSAALCGECLRAEVDITENIQEKGLKVYQCRKCLRWQGKNDHYVPCQLESLELLALCLKRIPGLSKADIVDAAFVWT 97
BLAST of mRNA_L-elsbetiae_contig88.17830.1 vs. uniprot
Match: A0A0L0FQG9_9EUKA (60S ribosomal export protein NMD3 n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FQG9_9EUKA) HSP 1 Score: 104 bits (260), Expect = 4.810e-24 Identity = 49/89 (55.06%), Postives = 63/89 (70.79%), Query Frame = 0 Query: 20 ILCCLCGRSIQPNGANMCGPCLREQVDVTEDIPKKGLVVIQCRRCLKWLTKNEHWSAFELESAPFLALVLKKIPGLAKQDLVDAKWIWT 108 ILCC+CG SI PN ANMC PC+R +VD+TE IPK+ + + CR C ++L EHW A +LES LAL LK++ GL K L+DA +IWT Sbjct: 16 ILCCICGTSIAPNDANMCVPCIRSRVDITEGIPKQ-MTIYFCRGCDRYLQPPEHWIACDLESRELLALCLKRLKGLNKVRLIDAGFIWT 103
BLAST of mRNA_L-elsbetiae_contig88.17830.1 vs. uniprot
Match: A0A7R9H8I5_TIMPO (60S ribosomal export protein NMD3 n=1 Tax=Timema poppense TaxID=170557 RepID=A0A7R9H8I5_TIMPO) HSP 1 Score: 97.8 bits (242), Expect = 6.450e-22 Identity = 46/93 (49.46%), Postives = 63/93 (67.74%), Query Frame = 0 Query: 16 QMANILCCLCGRSIQPNGANMCGPCLREQVDVTEDIPKKGLVVIQCRRCLKWLTKNEHWSAFELESAPFLALVLKKIPGLAKQDLVDAKWIWT 108 + A ILCC CG +I+PN ANMC PCLR QVD+TE IPK+ ++ C+ C ++L W + LES L+L LKK+ GL++ LVDA ++WT Sbjct: 13 EKAKILCCECGTAIEPNPANMCVPCLRTQVDITEGIPKQAVLHF-CKGCERYLQPPAEWVSCSLESRELLSLCLKKLKGLSRVKLVDAGFVWT 104
BLAST of mRNA_L-elsbetiae_contig88.17830.1 vs. uniprot
Match: A0A6J8ALK0_MYTCO (60S ribosomal export protein NMD3 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8ALK0_MYTCO) HSP 1 Score: 98.2 bits (243), Expect = 1.010e-21 Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 0 Query: 20 ILCCLCGRSIQPNGANMCGPCLREQVDVTEDIPKKGLVVIQCRRCLKWLTKNEHWSAFELESAPFLALVLKKIPGLAKQDLVDAKWIWT 108 ILCC CG I+PN +NMC CLR QVD+TE IPK+G++ CR C ++L HW A +LES L++ LKK+ GL L+DA ++WT Sbjct: 15 ILCCQCGTQIEPNPSNMCVACLRTQVDITEGIPKQGVLYF-CRNCERYLQPPNHWVAAQLESRELLSVCLKKLGGLKTVRLIDAGFVWT 102
BLAST of mRNA_L-elsbetiae_contig88.17830.1 vs. uniprot
Match: A0A8B6GB91_MYTGA (60S ribosomal export protein NMD3 n=3 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GB91_MYTGA) HSP 1 Score: 93.6 bits (231), Expect = 1.500e-21 Identity = 45/90 (50.00%), Postives = 60/90 (66.67%), Query Frame = 0 Query: 20 ILCCLCGRSIQPNGANMCGPCLREQVDVTEDIPKKGLVVIQCRRCLKWLTKNEHWSAFELESAPFLALVLKKIPG-LAKQDLVDAKWIWT 108 ILCC CG I+PN +NMC CLR QVD+TE IPK+G++ CR C ++L HW A +LES L++ LKK+ G L L+DA ++WT Sbjct: 15 ILCCQCGTQIEPNPSNMCVACLRTQVDITEGIPKQGVLYF-CRNCERYLQPPNHWVAAQLESRELLSVCLKKLGGGLKTVRLIDAGFVWT 103
BLAST of mRNA_L-elsbetiae_contig88.17830.1 vs. uniprot
Match: A0A8B6GBI4_MYTGA (60S ribosomal export protein NMD3 (Fragment) n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GBI4_MYTGA) HSP 1 Score: 93.6 bits (231), Expect = 1.640e-21 Identity = 45/90 (50.00%), Postives = 60/90 (66.67%), Query Frame = 0 Query: 20 ILCCLCGRSIQPNGANMCGPCLREQVDVTEDIPKKGLVVIQCRRCLKWLTKNEHWSAFELESAPFLALVLKKIPG-LAKQDLVDAKWIWT 108 ILCC CG I+PN +NMC CLR QVD+TE IPK+G++ CR C ++L HW A +LES L++ LKK+ G L L+DA ++WT Sbjct: 15 ILCCQCGTQIEPNPSNMCVACLRTQVDITEGIPKQGVLYF-CRNCERYLQPPNHWVAAQLESRELLSVCLKKLGGGLKTVRLIDAGFVWT 103
BLAST of mRNA_L-elsbetiae_contig88.17830.1 vs. uniprot
Match: A0A7R9G5D1_TIMSH (60S ribosomal export protein NMD3 (Fragment) n=1 Tax=Timema shepardi TaxID=629360 RepID=A0A7R9G5D1_TIMSH) HSP 1 Score: 96.3 bits (238), Expect = 2.080e-21 Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 0 Query: 20 ILCCLCGRSIQPNGANMCGPCLREQVDVTEDIPKKGLVVIQCRRCLKWLTKNEHWSAFELESAPFLALVLKKIPGLAKQDLVDAKWIWT 108 ILCC CG +I+PN ANMC PCLR QVD+TE IPK+ ++ C+ C ++L W + LES L+L LKK+ GL++ LVDA ++WT Sbjct: 2 ILCCECGTAIEPNPANMCVPCLRTQVDITEGIPKQAVLHF-CKGCERYLQPPAEWVSCSLESRELLSLCLKKLKGLSRVKLVDAGFVWT 89
BLAST of mRNA_L-elsbetiae_contig88.17830.1 vs. uniprot
Match: A0A7R9IBT2_9NEOP (60S ribosomal export protein NMD3 n=6 Tax=Timema TaxID=61471 RepID=A0A7R9IBT2_9NEOP) HSP 1 Score: 96.7 bits (239), Expect = 3.700e-21 Identity = 46/93 (49.46%), Postives = 62/93 (66.67%), Query Frame = 0 Query: 16 QMANILCCLCGRSIQPNGANMCGPCLREQVDVTEDIPKKGLVVIQCRRCLKWLTKNEHWSAFELESAPFLALVLKKIPGLAKQDLVDAKWIWT 108 + A ILCC CG +I+PN ANMC PCLR QVD+TE IPK+ ++ C+ C ++L W + LES L+L LKK+ GL + LVDA ++WT Sbjct: 13 EKAKILCCECGTAIEPNPANMCVPCLRTQVDITEGIPKQAVLHF-CKGCERYLQPPAEWVSCSLESRELLSLCLKKLKGLNRVKLVDAGFVWT 104 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig88.17830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_L-elsbetiae_contig88.17830.1 ID=prot_L-elsbetiae_contig88.17830.1|Name=mRNA_L-elsbetiae_contig88.17830.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bpback to top |