prot_L-elsbetiae_contig88.17829.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig88.17829.1
Unique Nameprot_L-elsbetiae_contig88.17829.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1009
Homology
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BLAST of mRNA_L-elsbetiae_contig88.17829.1 vs. uniprot
Match: A0A6H5KF31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF31_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 6.240e-5
Identity = 39/86 (45.35%), Postives = 49/86 (56.98%), Query Frame = 0 
Query:  288 MSELVELRGLVEATCEAVADQAKGSATISTEARELADEARASHGVVRAAKDSSCKALGLLETVVPAAFLSLENRLRKADDAVARVA 373
            MSEL ELR LVE T E V+DQ KG               + +H + +AA  SS K L +LET  P+AFLSLE RL + ++ VA  A
Sbjct:    1 MSELSELRTLVETTHEIVSDQTKGLD-------------QGTHSLAKAASGSSSKVLNVLETTTPSAFLSLETRLSRVEETVAAAA 73
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig88.17829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KF31_9PHAE6.240e-545.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 427..457
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 52..448
NoneNo IPR availablePANTHERPTHR23202:SF27VERPROLIN 1, ISOFORM Gcoord: 52..448

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig88contigL-elsbetiae_contig88:13583..37151 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig88.17829.1mRNA_L-elsbetiae_contig88.17829.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig88 13583..37151 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig88.17829.1 ID=prot_L-elsbetiae_contig88.17829.1|Name=mRNA_L-elsbetiae_contig88.17829.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1009bp
MDRNPIMSSSGRRRNVVKPGRIDTLLGNERDGLRLNFGLAMQMHRRSSYT
SASGSRPAAGGGGAGAGGGGGGGSGGGGRSRGVAATNADSSEHLTPLGSL
GQSQGAYSHGLFPSQGVSFSQGNSSVMGHQSLSDTGGFGLSQPSPDMLAP
YASTHHARDGGGGGGGPRDRSALRRVYGSLRGVRGANSSGSGSSSSLRGR
RQPQDSRLFSSTAPEKRMRRPQQQQQQQRDCQQDCQQYTRGSKGADFVGK
PPSTAAAGGTGRKGLGSDTAALQAFERLLSEQFRSQVMSELVELRGLVEA
TCEAVADQAKGSATISTEARELADEARASHGVVRAAKDSSCKALGLLETV
VPAAFLSLENRLRKADDAVARVAETAAATLACSKEAAAAATAAAAAAAAA
ASASEMLALGRTGPGSGDGQRQDVQSGQQQQQQQQQQEQQQQEQQQQEQQ
RPQQQQRPQQQQRRQQQPQQQRRRRWHDPGSPSGQSELSSGEYDQEHRSS
SRGRESDGHQHQHQHQHQHQHRLQHRLQHQHQHQHQHQQLPSTMTSPNQP
ADDRHWPGADESLRWTQPWGEAPKRPTAATLPAAAVRRPLQPPSRDRASA
VTTPSGTEQRRGGGGGSGGGSRSPTAAPPPPVLGSGPSSSSSSSPVLPSS
VPPAGRAVESAEEELDAGGGVDVPSAVLSPPEQELDSFNPFQEEGLGPMR
TGLVVWPADSAAAAAASAAADGAASPPGPRRFTGTSPAAAAATAAAGAAV
GPKKRLRSPSGASPSPGRRPPTFSIGTAAAAAAAATAAGAAVGPAAPATT
RSRSSSRIAARRAPPRQGRVVDDGGGGGDGGGSIGTGEGTAASGVGRTAS
HRGASSRPGPRGTTHNQRPPSSSPRRPSLHSPAANARPLSRRGPSVGRAG
ATAVAPGADSSKMPAPAAAAAAAARPPSRDGAGGHRERSGLDAPAAAAAA
AAGSARGYTPVRRSVAHGAPLPQTEPPGEDDEDGEDSVGEPGLTVEAYMA
QKRQDKVP*
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