prot_L-elsbetiae_contig876.17799.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig876.17799.1
Unique Nameprot_L-elsbetiae_contig876.17799.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length72
Homology
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BLAST of mRNA_L-elsbetiae_contig876.17799.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 2.640e-5
Identity = 26/47 (55.32%), Postives = 31/47 (65.96%), Query Frame = 0 
Query:    1 MGCDGDESVACGGFNSYSLFKYDKG-DPPITAPEPTSTPEPTPRPVA 46
            M C GD +VACGG+++YSLFKYD G + P TAP   S   PT  P A
Sbjct: 1316 MACSGDGTVACGGYDAYSLFKYDNGGEAPTTAPVTDSPDTPTMAPTA 1362
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig876.17799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRE8_ECTSI2.640e-555.32EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig876contigL-elsbetiae_contig876:15481..15990 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig876.17799.1mRNA_L-elsbetiae_contig876.17799.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig876 15454..16007 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig876.17799.1 ID=prot_L-elsbetiae_contig876.17799.1|Name=mRNA_L-elsbetiae_contig876.17799.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=72bp
MGCDGDESVACGGFNSYSLFKYDKGDPPITAPEPTSTPEPTPRPVAPVAP
PTPGSTPELTPEPVTPMPPPA*
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