prot_L-elsbetiae_contig8752.17786.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8752.17786.1
Unique Nameprot_L-elsbetiae_contig8752.17786.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length127
Homology
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BLAST of mRNA_L-elsbetiae_contig8752.17786.1 vs. uniprot
Match: D7G809_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G809_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 1.570e-62
Identity = 94/125 (75.20%), Postives = 105/125 (84.00%), Query Frame = 0 
Query:    2 MPEKKHYSYTNLADTPQHGEIIESSYLLGEKGPKSTWTKVLEMVILLATVGGCAYLFLFLFHHGNHRPAA-AKDSASHPHTPVGASSSSSHGPASCLNYPKCAELDLGGACCPDSKGEILDCCTE 125
            MP KK+YSYTNLADTPQHGEIIESSYLL EKGPKS WTKVLEMV+L+AT+GGCAYL +FLFHH NH  +A AKDSASHPH PVGASSS+S  PASC +  KCAEL+L G CCP +KG+ L CC E
Sbjct:    1 MPPKKNYSYTNLADTPQHGEIIESSYLLAEKGPKSIWTKVLEMVVLVATIGGCAYLVVFLFHHANHHDSATAKDSASHPHPPVGASSSTSQDPASCNSNSKCAELELNGFCCPTAKGDYLACCFE 125
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8752.17786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G809_ECTSI1.570e-6275.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..126
NoneNo IPR availableTMHMMTMhelixcoord: 41..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8752contigL-elsbetiae_contig8752:2076..4508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8752.17786.1mRNA_L-elsbetiae_contig8752.17786.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8752 2042..4624 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8752.17786.1 ID=prot_L-elsbetiae_contig8752.17786.1|Name=mRNA_L-elsbetiae_contig8752.17786.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=127bp
MMPEKKHYSYTNLADTPQHGEIIESSYLLGEKGPKSTWTKVLEMVILLAT
VGGCAYLFLFLFHHGNHRPAAAKDSASHPHTPVGASSSSSHGPASCLNYP
KCAELDLGGACCPDSKGEILDCCTET*
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