prot_L-elsbetiae_contig8741.17772.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8741.17772.1
Unique Nameprot_L-elsbetiae_contig8741.17772.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length89
Homology
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BLAST of mRNA_L-elsbetiae_contig8741.17772.1 vs. uniprot
Match: D8LQ02_ECTSI (C-CAP/cofactor C-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ02_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 1.010e-22
Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 0 
Query:    1 MPSSVLDAIAGRNAAQRRRVVEKKRGETIDVPEGSGVLVTGCSGCVINAPGRSASVT 57
            M SSVL  IA RNAAQRRRVVEKK GETIDVPEGSG+LVTGCSGC INAPGRS+SVT
Sbjct:    1 MSSSVLKTIAARNAAQRRRVVEKKHGETIDVPEGSGLLVTGCSGCTINAPGRSSSVT 57
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8741.17772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ02_ECTSI1.010e-2285.96C-CAP/cofactor C-like domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006599CARP motifSMARTSM00673carpcoord: 42..79
e-value: 0.0012
score: 28.1
IPR013912Adenylate cyclase-associated CAP, C-terminalPFAMPF08603CAP_Ccoord: 31..88
e-value: 3.5E-11
score: 42.9
IPR016098Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminalGENE3D2.160.20.70coord: 14..89
e-value: 1.0E-12
score: 49.6
IPR017901C-CAP/cofactor C-like domainPROSITEPS51329C_CAP_COFACTOR_Ccoord: 2..89
score: 18.933
IPR036223Adenylate cyclase-associated CAP, C-terminal superfamilySUPERFAMILY69340C-terminal domain of adenylylcyclase associated proteincoord: 28..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8741contigL-elsbetiae_contig8741:7994..8260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8741.17772.1mRNA_L-elsbetiae_contig8741.17772.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8741 7994..8260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8741.17772.1 ID=prot_L-elsbetiae_contig8741.17772.1|Name=mRNA_L-elsbetiae_contig8741.17772.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp
MPSSVLDAIAGRNAAQRRRVVEKKRGETIDVPEGSGVLVTGCSGCVINAP
GRSASVTVERCEGTRVNVGSVVASLEVIHCKDVRVSVER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006599CARP_motif
IPR013912Adenylate_cyclase-assoc_CAP_C
IPR016098CAP/MinC_C
IPR017901C-CAP_CF_C-like
IPR036223CAP_C_sf