prot_L-elsbetiae_contig8722.17754.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8722.17754.1
Unique Nameprot_L-elsbetiae_contig8722.17754.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length199
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8722.17754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041367E3 ligase, CCCH-type zinc fingerPFAMPF18044zf-CCCH_4coord: 2..22
e-value: 9.9E-6
score: 25.2
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 1..25
score: 12.512

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8722contigL-elsbetiae_contig8722:3022..3618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8722.17754.1mRNA_L-elsbetiae_contig8722.17754.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8722 3022..3725 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8722.17754.1 ID=prot_L-elsbetiae_contig8722.17754.1|Name=mRNA_L-elsbetiae_contig8722.17754.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=199bp
GVCRQFTSKGSCRFGARCIFQHVATTKRKDNGGGDGGGAGKDGGGQSAAA
QAAPTPAAKKARKTYAPNGGGASGGKGTGGDGAAKGADEWRRRSLPVVRG
RSPALAIAVTPLSGKLLLRPRVTKTVAQGGAHELRRCLYLLRSRPRPGLM
GPARVEMVCQVAQASAVYLQGEDCRHDAMRCIEAEIEVPRVRADFVRF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041367Znf-CCCH_4
IPR000571Znf_CCCH