prot_L-elsbetiae_contig8721.17752.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8721.17752.1
Unique Nameprot_L-elsbetiae_contig8721.17752.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length70
Homology
BLAST of mRNA_L-elsbetiae_contig8721.17752.1 vs. uniprot
Match: A0A6H5KXJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXJ8_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 3.830e-37
Identity = 67/70 (95.71%), Postives = 70/70 (100.00%), Query Frame = 0
Query:    1 MELLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEK 70
            MELLKLFGVPYVVAPMEAEAQCC+LEQLRLVDGTVTDDSDAFAFGGRAVYKNIF+ERK+VEAYLLPDAEK
Sbjct: 1298 MELLKLFGVPYVVAPMEAEAQCCMLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFSERKFVEAYLLPDAEK 1367          
BLAST of mRNA_L-elsbetiae_contig8721.17752.1 vs. uniprot
Match: D7FZY4_ECTSI (DNA repair enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY4_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 9.740e-37
Identity = 66/70 (94.29%), Postives = 70/70 (100.00%), Query Frame = 0
Query:    1 MELLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEK 70
            M+LLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVYKNIF++RK+VEAYLLPDAEK
Sbjct: 1309 MDLLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFSDRKFVEAYLLPDAEK 1378          
BLAST of mRNA_L-elsbetiae_contig8721.17752.1 vs. uniprot
Match: K3WLQ1_GLOUD (XPGI domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLQ1_GLOUD)

HSP 1 Score: 107 bits (266), Expect = 1.350e-27
Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 0
Query:    1 MELLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEK 70
            MELL+LFGVPY+V PMEAEAQC  LEQL LVDG +TDDSD F FGG+ VYKNIF+ +K+VEA+   D EK
Sbjct:    6 MELLRLFGVPYLVCPMEAEAQCAALEQLGLVDGIITDDSDIFPFGGKKVYKNIFHNQKFVEAFFAQDIEK 75          
BLAST of mRNA_L-elsbetiae_contig8721.17752.1 vs. uniprot
Match: A0A835RFP9_VANPL (XPGI domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RFP9_VANPL)

HSP 1 Score: 104 bits (259), Expect = 2.210e-27
Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 0
Query:    2 ELLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAE 69
            ELL++FG+PY++APMEAEAQC  +E + LVDG VTDDSD F FG R VYKNIF++RKYVE Y + D E
Sbjct:   26 ELLQMFGLPYIIAPMEAEAQCAYMEMIHLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDIE 93          
BLAST of mRNA_L-elsbetiae_contig8721.17752.1 vs. uniprot
Match: A0A162R596_MUCCL (Uncharacterized protein n=1 Tax=Mucor lusitanicus CBS 277.49 TaxID=747725 RepID=A0A162R596_MUCCL)

HSP 1 Score: 107 bits (268), Expect = 7.000e-27
Identity = 48/69 (69.57%), Postives = 57/69 (82.61%), Query Frame = 0
Query:    2 ELLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEK 70
            ELLKLFG+PY+V+PMEAEAQC  LE L+LVDGTVTDDSD F FG   VYKN+FN+++YVE YL  D E+
Sbjct:  134 ELLKLFGIPYLVSPMEAEAQCATLEALKLVDGTVTDDSDVFLFGASRVYKNMFNQQRYVECYLAQDVER 202          
BLAST of mRNA_L-elsbetiae_contig8721.17752.1 vs. uniprot
Match: W7TX36_9STRA (Dna repair enzyme n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TX36_9STRA)

HSP 1 Score: 110 bits (276), Expect = 9.480e-27
Identity = 53/70 (75.71%), Postives = 59/70 (84.29%), Query Frame = 0
Query:    1 MELLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEK 70
            M LL+LFGVPY+VAPMEAEAQC VLE L LVDG V+DDSD+F FG RAVYKNIF+ERKYVEAY   D E+
Sbjct:  390 MHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDSFLFGARAVYKNIFDERKYVEAYRAEDLER 459          
BLAST of mRNA_L-elsbetiae_contig8721.17752.1 vs. uniprot
Match: A0A5K1BTR9_9MAGN (XPGI domain-containing protein (Fragment) n=15 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1BTR9_9MAGN)

HSP 1 Score: 100 bits (250), Expect = 1.140e-26
Identity = 44/64 (68.75%), Postives = 54/64 (84.38%), Query Frame = 0
Query:    2 ELLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLL 65
            ELL++FG+PY++APMEAEAQC  +E + LVDG VTDDSDAF FG R VYKNIF++RKYVE Y +
Sbjct:    1 ELLQMFGLPYIIAPMEAEAQCAYMELIGLVDGVVTDDSDAFLFGARNVYKNIFDDRKYVETYFM 64          
BLAST of mRNA_L-elsbetiae_contig8721.17752.1 vs. uniprot
Match: A0A6I9UEP2_SESIN (DNA repair protein UVH3 isoform X1 n=2 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9UEP2_SESIN)

HSP 1 Score: 109 bits (273), Expect = 2.430e-26
Identity = 48/68 (70.59%), Postives = 58/68 (85.29%), Query Frame = 0
Query:    2 ELLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAE 69
            ELL++FG+PY++APMEAEAQC  +EQ  LVDG VTDDSDAF FG R+VYKNIF++RKYVE YL+ D E
Sbjct:  880 ELLQMFGIPYIIAPMEAEAQCAFMEQSNLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYLMKDIE 947          
BLAST of mRNA_L-elsbetiae_contig8721.17752.1 vs. uniprot
Match: UPI000901E350 (DNA repair protein UVH3 isoform X1 n=5 Tax=Camelina sativa TaxID=90675 RepID=UPI000901E350)

HSP 1 Score: 109 bits (273), Expect = 2.430e-26
Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 0
Query:    2 ELLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEK 70
            ELL++FG+PY++APMEAEAQC  +EQL LVDG VTDDSD F FG R+VYKNIF++RKYVE Y + D EK
Sbjct:  978 ELLQIFGIPYIIAPMEAEAQCAFMEQLDLVDGIVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIEK 1046          
BLAST of mRNA_L-elsbetiae_contig8721.17752.1 vs. uniprot
Match: A0A836CHS7_9STRA (XPGI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHS7_9STRA)

HSP 1 Score: 109 bits (272), Expect = 3.150e-26
Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 0
Query:    2 ELLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPD 67
            ELL L GVPY+VAPMEAEAQC  LE+L LVDG VTDDSDAF FG +AVYKNIF ++KYVEAYLLPD
Sbjct:  187 ELLHLLGVPYLVAPMEAEAQCVELERLGLVDGIVTDDSDAFVFGAKAVYKNIFEDQKYVEAYLLPD 252          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8721.17752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXJ8_9PHAE3.830e-3795.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZY4_ECTSI9.740e-3794.29DNA repair enzyme n=1 Tax=Ectocarpus siliculosus T... [more]
K3WLQ1_GLOUD1.350e-2770.00XPGI domain-containing protein n=1 Tax=Globisporan... [more]
A0A835RFP9_VANPL2.210e-2766.18XPGI domain-containing protein n=1 Tax=Vanilla pla... [more]
A0A162R596_MUCCL7.000e-2769.57Uncharacterized protein n=1 Tax=Mucor lusitanicus ... [more]
W7TX36_9STRA9.480e-2775.71Dna repair enzyme n=2 Tax=Nannochloropsis gaditana... [more]
A0A5K1BTR9_9MAGN1.140e-2668.75XPGI domain-containing protein (Fragment) n=15 Tax... [more]
A0A6I9UEP2_SESIN2.430e-2670.59DNA repair protein UVH3 isoform X1 n=2 Tax=Sesamum... [more]
UPI000901E3502.430e-2669.57DNA repair protein UVH3 isoform X1 n=5 Tax=Camelin... [more]
A0A836CHS7_9STRA3.150e-2678.79XPGI domain-containing protein n=1 Tax=Tribonema m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006084XPG/Rad2 endonucleasePRINTSPR00853XPGRADSUPERcoord: 4..21
score: 61.98
coord: 25..45
score: 41.96
IPR006086XPG-I domainSMARTSM00484xpgineucoord: 5..68
e-value: 2.9E-19
score: 80.0
IPR006086XPG-I domainPFAMPF00867XPG_Icoord: 5..58
e-value: 3.4E-20
score: 72.2
NoneNo IPR availableGENE3D3.40.50.1010coord: 1..67
e-value: 5.2E-25
score: 90.0
NoneNo IPR availablePANTHERPTHR16171:SF7DNA REPAIR PROTEIN RAD2coord: 1..70
NoneNo IPR availablePANTHERPTHR16171FAMILY NOT NAMEDcoord: 1..70
IPR019974XPG conserved sitePROSITEPS00842XPG_2coord: 8..22
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 1..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8721contigL-elsbetiae_contig8721:7542..8317 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8721.17752.1mRNA_L-elsbetiae_contig8721.17752.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8721 7527..8317 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8721.17752.1 ID=prot_L-elsbetiae_contig8721.17752.1|Name=mRNA_L-elsbetiae_contig8721.17752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=70bp
MELLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVY
KNIFNERKYVEAYLLPDAEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006084XPG/Rad2
IPR006086XPG-I_dom
IPR019974XPG_CS
IPR029060PIN-like_dom_sf