prot_L-elsbetiae_contig8672.17705.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8672.17705.1
Unique Nameprot_L-elsbetiae_contig8672.17705.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length336
Homology
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BLAST of mRNA_L-elsbetiae_contig8672.17705.1 vs. uniprot
Match: A0A6H5JZN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN3_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 1.970e-38
Identity = 124/283 (43.82%), Postives = 137/283 (48.41%), Query Frame = 0 
Query:   44 VVPRRSEWRPSEAHKTSATSVARKEVQGAQLKAGAAPRARVAARAVATDGTDKARSPGLRRRELLGGAEDVQSQVQAQLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVSLSATTRFRARRELQRLAAAGNAEAIEALRVSGSLSSPSFASSSEPDGAXXXXXXXXXPVEGSGGG------------FTPLTVLPVLLALVGAGYCVVNDLAPREWLWRIGGGGGXXXXXAGPGDSAGAEGRDAQGKEQEGEEDASSLSPLLRTLSRVAAFVPVGS 314
            VV  RS WRPSEAHKTSAT  AR E Q A + AG A   R  A A A   T+K++SPGLRRR LL GA+DV  +    L                                  SVVS SAT+RFRARREL+RLAA+GN +A+EALR    L SP+ +S                PV G GGG             TPLTVLPVLLALVGAGYC VNDL PRE  W                                      SLSPLLRTLSRV AFVPV S
Sbjct:   81 VVAPRSSWRPSEAHKTSATRRARSEAQQANIMAGTAVAPRTPATASAAGTTNKSKSPGLRRRGLLDGADDVPWKSFPSLVSGASESSARTAKGGAAAAGEAPAL---------SVVSRSATSRFRARRELERLAASGNEDAVEALR---DLDSPTASS---------------PPVSGEGGGAEXXXXXXXXSGLTPLTVLPVLLALVGAGYCAVNDLIPRELSWA----------------GXXXXXXXXXXXXXXXXXXXXSLSPLLRTLSRVGAFVPVAS 320
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8672.17705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JZN3_9PHAE1.970e-3843.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8672contigL-elsbetiae_contig8672:3051..5224 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8672.17705.1mRNA_L-elsbetiae_contig8672.17705.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8672 3050..5224 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8672.17705.1 ID=prot_L-elsbetiae_contig8672.17705.1|Name=mRNA_L-elsbetiae_contig8672.17705.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=336bp
KGNKGASCSTAVPPLSSAAISTENVAAAPAAPAGTPALDASRVVVPRRSE
WRPSEAHKTSATSVARKEVQGAQLKAGAAPRARVAARAVATDGTDKARSP
GLRRRELLGGAEDVQSQVQAQLAAASAAPLPETAATTKAAAAAVAGAGGG
GVGPPPSVVSLSATTRFRARRELQRLAAAGNAEAIEALRVSGSLSSPSFA
SSSEPDGASGGGGGGGGPVEGSGGGFTPLTVLPVLLALVGAGYCVVNDLA
PREWLWRIGGGGGGGGGAAGPGDSAGAEGRDAQGKEQEGEEDASSLSPLL
RTLSRVAAFVPVGSSPSPSSSPSSSLSSSSSADPTA
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