prot_L-elsbetiae_contig867.17703.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig867.17703.1
Unique Nameprot_L-elsbetiae_contig867.17703.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length106
Homology
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BLAST of mRNA_L-elsbetiae_contig867.17703.1 vs. uniprot
Match: A0A6H5JG07_9PHAE (Rubredoxin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JG07_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 1.430e-58
Identity = 87/96 (90.62%), Postives = 90/96 (93.75%), Query Frame = 0 
Query:   10 GDFECLQCSFVYKPENAGQGALQGTQFDDLPSSWLCPVCKAPKDTFIAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLAAFFVLFLAGYALE 105
            GD ECLQC FVYKPENAGQGAL GTQFDDLPS+W+CPVCKAPKDTF AQTKTIAGFEDNANYGFGANQMTGSQKNLLIFG L AFFVLFLAGYAL+
Sbjct:  135 GDHECLQCGFVYKPENAGQGALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGGLFAFFVLFLAGYALD 230
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BLAST of mRNA_L-elsbetiae_contig867.17703.1 vs. uniprot
Match: A0A7S0GMA1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GMA1_9EUKA)

HSP 1 Score: 127 bits (319), Expect = 1.790e-34
Identity = 58/98 (59.18%), Postives = 69/98 (70.41%), Query Frame = 0 
Query:   10 GDFECLQCSFVYKPENAGQGAL--QGTQFDDLPSSWLCPVCKAPKDTFIAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLAAFFVLFLAGYALE 105
            GDFEC++C FVYK EN    +L  +GT F+DLP  WLCPVC  PKDTF  Q K +AGF +N  YGFG N +T  QK+ LI+GSLAAFF LFL GY + 
Sbjct:  137 GDFECVECQFVYKAENGDPESLIAKGTAFEDLPEDWLCPVCGQPKDTFEEQGKIVAGFAENQGYGFGTNSLTEGQKSALIYGSLAAFFALFLLGYKMN 234
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BLAST of mRNA_L-elsbetiae_contig867.17703.1 vs. uniprot
Match: A0A7S2RF64_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RF64_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.700e-30
Identity = 56/96 (58.33%), Postives = 64/96 (66.67%), Query Frame = 0 
Query:   10 GDFECLQCSFVYKPENAGQGALQGTQFDDLPSSWLCPVCKAPKDTFIAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLAAFFVLFLAGYALE 105
            G  EC  C +VY        A +GTQF +LPSSW CP C + K  F  QT+T+AGFE+N  YGFG N MT  +KN LIFGSLAAFFVLFL GY LE
Sbjct:   51 GRAECKTCGYVYDE------ATEGTQFVELPSSWRCPQCLSQKGFFEVQTRTLAGFEENLQYGFGTNTMTAGEKNNLIFGSLAAFFVLFLGGYLLE 140
[Close]
BLAST of mRNA_L-elsbetiae_contig867.17703.1 vs. uniprot
Match: A0A087SUC3_AUXPR (Rubredoxin n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SUC3_AUXPR)

HSP 1 Score: 110 bits (274), Expect = 3.060e-29
Identity = 51/98 (52.04%), Postives = 61/98 (62.24%), Query Frame = 0 
Query:   10 GDFECLQCSFVYKPENAGQG--ALQGTQFDDLPSSWLCPVCKAPKDTFIAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLAAFFVLFLAGYALE 105
            G+ EC  C + Y P+N        +GTQF +LP  W CPVC   KD FI + K +AGF +N  YG GAN MTG QK+L IFGSL  FFVLF+ GY L 
Sbjct:    6 GEAECKGCGYTYDPKNGDPDYPVSKGTQFQNLPDDWQCPVCGGQKDIFITKQKEVAGFAENQGYGLGANSMTGEQKSLTIFGSLLFFFVLFILGYFLN 103
[Close]
BLAST of mRNA_L-elsbetiae_contig867.17703.1 vs. uniprot
Match: A0A7S2DCL4_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCL4_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.130e-27
Identity = 55/96 (57.29%), Postives = 65/96 (67.71%), Query Frame = 0 
Query:   10 GDFECLQCSFVYKPENAGQGALQGTQFDDLPSSWLCPVCKAPKDTFIAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLAAFFVLFLAGYALE 105
            G + C  C +VY  ENA     QGT F  LP+SW CP C + K  F +QT+TIAGF++N  YGFG N+MTG  KN LIFGSLA F VLFL+GY LE
Sbjct:   93 GKYSCKVCKYVYD-ENA-----QGTAFVSLPNSWRCPQCLSQKGVFKSQTQTIAGFQENQEYGFGTNKMTGESKNGLIFGSLAFFAVLFLSGYLLE 182
[Close]
BLAST of mRNA_L-elsbetiae_contig867.17703.1 vs. uniprot
Match: A0A7S3K377_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K377_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.390e-27
Identity = 56/99 (56.57%), Postives = 64/99 (64.65%), Query Frame = 0 
Query:   10 GDFECLQCSFVYKPENAGQ--GALQ-GTQFDDLPSSWLCPVCKAPKDTFIAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLAAFFVLFLAGYALE 105
            G + C  CS+ Y PE  GQ  G +Q GT F  LP+SW CP C+A KD F  QT TIAGF +N  YG G N MT   K+ LIFGSLAAFFVLF+ GY L 
Sbjct:   93 GIYICKVCSYKYDPE-VGQPIGGIQPGTPFSQLPASWRCPTCRAQKDAFEPQTLTIAGFAENQGYGLGGNAMTEESKSTLIFGSLAAFFVLFMGGYLLN 190
[Close]
BLAST of mRNA_L-elsbetiae_contig867.17703.1 vs. uniprot
Match: A0A0M0JEW5_9EUKA (Rubredoxin-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JEW5_9EUKA)

HSP 1 Score: 108 bits (269), Expect = 1.680e-27
Identity = 51/96 (53.12%), Postives = 62/96 (64.58%), Query Frame = 0 
Query:   10 GDFECLQCSFVYKPENAGQGALQGTQFDDLPSSWLCPVCKAPKDTFIAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLAAFFVLFLAGYALE 105
            G+ +C  C + YK E    G  + T F+ +P SW CP CK+PK  F A+T  IAGFEDN  YGFG N  T SQK+  IFG LAAFF LF++GYAL 
Sbjct:   89 GNAKCNTCGYKYKWEEGAPGIPKRTPFELVPDSWSCPNCKSPKAFFAAETIEIAGFEDNQKYGFGTNTWTESQKSTAIFGGLAAFFALFISGYALN 184
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BLAST of mRNA_L-elsbetiae_contig867.17703.1 vs. uniprot
Match: A0A0G4EEM1_VITBC (Rubredoxin-like domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EEM1_VITBC)

HSP 1 Score: 109 bits (272), Expect = 2.220e-27
Identity = 50/97 (51.55%), Postives = 66/97 (68.04%), Query Frame = 0 
Query:   10 GDFECLQCSFVYK-PENAGQGALQGTQFDDLPSSWLCPVCKAPKDTFIAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLAAFFVLFLAGYALE 105
            GD++C  C +VY+  +  G      T+++D+P+ W CP CKAPK+ F   T+TIAGF DN  YG G N +T  QKN+LIFGSL  FF+LFL+GY LE
Sbjct:  142 GDYQCRNCGYVYRWKQGDGIYLKANTKWEDVPTWWKCPNCKAPKNYFNPITRTIAGFADNQGYGIGTNTLTAGQKNVLIFGSLGLFFLLFLSGYLLE 238
[Close]
BLAST of mRNA_L-elsbetiae_contig867.17703.1 vs. uniprot
Match: A0A7S0ZKG2_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKG2_9RHOD)

HSP 1 Score: 107 bits (267), Expect = 5.050e-27
Identity = 53/98 (54.08%), Postives = 64/98 (65.31%), Query Frame = 0 
Query:   10 GDFECLQCSFVYKPENAGQ--GALQGTQFDDLPSSWLCPVCKAPKDTFIAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLAAFFVLFLAGYALE 105
            G FEC  CS+VY P+   Q  G   G  FD LP ++ CP CK+ K  F +  K IAGF DN +YGFG N  T +QK+ LIFG LAAFF+LFL+GY LE
Sbjct:  103 GQFECQNCSYVYDPKKGDQYAGVKPGLPFDMLPETFSCPGCKSDKSEFKSIKKVIAGFADNQSYGFGTNTWTEAQKSGLIFGGLAAFFLLFLSGYLLE 200
[Close]
BLAST of mRNA_L-elsbetiae_contig867.17703.1 vs. uniprot
Match: A0A7S0WTU8_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WTU8_9CHLO)

HSP 1 Score: 105 bits (263), Expect = 1.040e-26
Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 0 
Query:   10 GDFECLQCSFVYKPENAGQG--ALQGTQFDDLPSSWLCPVCKAPKDTFIAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLAAFFVLFLAGYALE 105
            G   C  C + YKPE         +G  F+ LP  + CP+C +PK  F +Q K +AGF +N  YG G N MTGSQK LLI+G+LA FF+LF+AGYAL+
Sbjct:   77 GSATCNGCGYEYKPEKGDPEFPIAKGINFEQLPDDYNCPICGSPKTNFRSQLKVVAGFAENQKYGLGTNSMTGSQKTLLIYGALAIFFILFIAGYALD 174
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig867.17703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG07_9PHAE1.430e-5890.63Rubredoxin-like domain-containing protein n=2 Tax=... [more]
A0A7S0GMA1_9EUKA1.790e-3459.18Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S2RF64_9STRA2.700e-3058.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A087SUC3_AUXPR3.060e-2952.04Rubredoxin n=2 Tax=Auxenochlorella protothecoides ... [more]
A0A7S2DCL4_9STRA1.130e-2757.29Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S3K377_9STRA1.390e-2756.57Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A0M0JEW5_9EUKA1.680e-2753.13Rubredoxin-like protein n=1 Tax=Chrysochromulina t... [more]
A0A0G4EEM1_VITBC2.220e-2751.55Rubredoxin-like domain-containing protein n=2 Tax=... [more]
A0A7S0ZKG2_9RHOD5.050e-2754.08Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0WTU8_9CHLO1.040e-2648.98Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024935Rubredoxin domainPRINTSPR00163RUBREDOXINcoord: 11..27
score: 27.71
coord: 39..55
score: 50.46
IPR024935Rubredoxin domainPFAMPF00301Rubredoxincoord: 12..55
e-value: 1.3E-12
score: 47.5
NoneNo IPR availableGENE3D2.20.28.10coord: 8..62
e-value: 1.7E-15
score: 58.3
NoneNo IPR availablePANTHERPTHR47627FAMILY NOT NAMEDcoord: 7..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 105..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..84
NoneNo IPR availableSUPERFAMILY57802Rubredoxin-likecoord: 10..72
NoneNo IPR availableTMHMMTMhelixcoord: 85..104
IPR024934Rubredoxin-like domainPROSITEPS50903RUBREDOXIN_LIKEcoord: 9..58
score: 11.327

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig867contigL-elsbetiae_contig867:16555..17669 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig867.17703.1mRNA_L-elsbetiae_contig867.17703.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig867 16555..17669 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig867.17703.1 ID=prot_L-elsbetiae_contig867.17703.1|Name=mRNA_L-elsbetiae_contig867.17703.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp
MYWCDVCFVGDFECLQCSFVYKPENAGQGALQGTQFDDLPSSWLCPVCKA
PKDTFIAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGSLAAFFVLFLA
GYALE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024935Rubredoxin_dom
IPR024934Rubredoxin-like_dom