prot_L-elsbetiae_contig865.17686.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig865.17686.1
Unique Nameprot_L-elsbetiae_contig865.17686.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length552
Homology
BLAST of mRNA_L-elsbetiae_contig865.17686.1 vs. uniprot
Match: D8LGU3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGU3_ECTSI)

HSP 1 Score: 570 bits (1469), Expect = 3.720e-197
Identity = 343/541 (63.40%), Postives = 396/541 (73.20%), Query Frame = 0
Query:   34 MGQLDKGVYFIPALNAAACALLSSYTLISILDHERWMKEWGDDHEAEAVMHLRTPMLSAAVAMGIGGITTVHQVALSSLRLDGTITVGANVLYTCLAAVTAITTIFAMLYVARMDSFAGVERVEHLKEVILKRHTISELKLKKGLGKRIAYMGKLHHVVAAGAILGTGIMGTWALNVQGLTGDFVVTLSTSGIAYLAVYVLATSVVSCWLLFRVLVWKPSTEYLRPLCSAFFAISLWSVDY--------------IGKTVAVAFDRAEEGLERNGYGWSLEASRGTGGWLMIMMAFGAVITQYAIALELRLAYCGLQDTNLDLQLVAGTGAPEERTRKTSAIHNNT-KRRSTGGP-------SRSVPARSRRRSVAVHAAASCPGSPVSPGSPFGSPMSTRSSISMTRTFSPTGTAGGGDGGGGFVQAAQITTSKGVVSKVFQMGSNSLGGMMKKNSQLPRSIHVKPVTAKRESKMLVYEASVAEDPDEDKHHPSQNITLPTVEQHPSPPMPELLLTPRDKPPSDSSLGWEIVGLTSEGKG 552
            MG++ +GVY  PALNAAAC+LLSSYTLISILDHERWMKEWGD+HEA AVMHLRTP+LSAAVAMGIGGITTVHQVALSSLRLDG I +G NVL TCLAAVT ITT+FAMLYVAR D+F GV+RVE LKEVILKRHTI+ELKLKKGLGK+ AY+G+L H+VAAG IL  GI+G WALNV GLTG+F+V   TSGI  LA Y+L TS+VSCWLLFRVLVWKPS EYLRPLCS  FAISLWS D               +GKT+A+ F+   +GL R G GWS+ ASR  G WLMIMMAFGAV+TQYAIALELRLAYCGLQDTNLDLQL+AGTGAPEE  RKTSAI NNT KRR TG         SRS PARSRRRSV VHA+A+           F SP      +++TRTFSP G+ GGGDG       A ++ S GVVS + +MG  S+G +  K+SQ  RSI V+P  A   SK+LVYE SVAEDP+ED +HP  +  LP++ +HP+   P +   PR    S    G      TS+G+G
Sbjct:    1 MGEISQGVYVTPALNAAACSLLSSYTLISILDHERWMKEWGDEHEAVAVMHLRTPILSAAVAMGIGGITTVHQVALSSLRLDGEIELGGNVLCTCLAAVTGITTMFAMLYVARKDTFGGVDRVERLKEVILKRHTIAELKLKKGLGKKAAYLGQLQHIVAAGTILAMGILGCWALNVLGLTGEFMVVWRTSGIVVLAFYLLVTSIVSCWLLFRVLVWKPSYEYLRPLCSVVFAISLWSADLLQRGSIDCHVCVQAVGKTIAITFEYTGDGLGRVGLGWSVGASRDGGEWLMIMMAFGAVMTQYAIALELRLAYCGLQDTNLDLQLLAGTGAPEEHIRKTSAIKNNTSKRRHTGQGGRTGNTGSRSPPARSRRRSVVVHASAAAS---------FASPT-----MNLTRTFSP-GSTGGGDGLA--KHPAHLSASAGVVSALLRMGQKSIG-LPTKSSQ-SRSIRVQP--AMDCSKVLVYEPSVAEDPEEDNNHP--HPLLPSL-RHPTHKPPPVESPPRQASASSVEGGRWARRPTSDGRG 517          
BLAST of mRNA_L-elsbetiae_contig865.17686.1 vs. uniprot
Match: A0A836CFP1_9STRA (MHYT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFP1_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.410e-14
Identity = 73/246 (29.67%), Postives = 117/246 (47.56%), Query Frame = 0
Query:  140 AMLYVARMDSFAGVERVEHLKEVI--LKRHTISELKLKKGLGKR-----IAYMGKLHHVVAAGAILGTGIMGTWALNVQGLTGDFVVTLSTSGIAYLAVYVLATSVVSCWLLFRVLVWKPSTEYLRPLCSAFFAISLWSVDYIGK----------------TVAVAFDRAEEGLERNGYGWSLEASRGTGGWLMIMMAFGAVITQYAIALELRLAYCGLQDTNLDLQLVAG-TGAPEERTRKTSAI 361
            A L VA  D +AG +RVE L +V+  L++ + + LK  K  G+R     +AY+G+L HV    A+   G++    L +  +TG F +  +   +A   V  L  S+   W+LFR+L+WK S  +L+P+C+A  A+ + ++ Y                    +AV +  A +     G   S + +      L   +   A+  + A+  +LR AY  LQDTNL   L +G  G P  R   +S I
Sbjct:  184 AGLGVAAHDVYAGADRVERLMQVMSELQQRSNASLKDLKSAGQRRRILRVAYLGRLQHVAGGAALTALGVICMHYLGMMAMTGSFHMVWNWWWVAASCVIALVVSLAGFWILFRLLIWKASLTWLKPVCAAVIAVVVCAMRYTAXXXXXXXXXXXXXXXXGALAVHYIHAPDLTPAAG---SFQVTTNVQLGLCTSVLLAALAAERAVCQDLRSAYAQLQDTNLYAMLSSGGRGTPLARRGNSSTI 426          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig865.17686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGU3_ECTSI3.720e-19763.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CFP1_9STRA2.410e-1429.67MHYT domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 307..326
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 105..123
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 146..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 226..249
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 327..552
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 276..306
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 250..255
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..275
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..206
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 207..225
NoneNo IPR availableTMHMMTMhelixcoord: 89..108
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 225..247
NoneNo IPR availableTMHMMTMhelixcoord: 260..282
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 304..326
NoneNo IPR availableTMHMMTMhelixcoord: 188..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig865contigL-elsbetiae_contig865:7081..13036 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig865.17686.1mRNA_L-elsbetiae_contig865.17686.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig865 7081..13036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig865.17686.1 ID=prot_L-elsbetiae_contig865.17686.1|Name=mRNA_L-elsbetiae_contig865.17686.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=552bp
EGTNSSGHPSRVSAATGAGRKQAEAQPRPRSPIMGQLDKGVYFIPALNAA
ACALLSSYTLISILDHERWMKEWGDDHEAEAVMHLRTPMLSAAVAMGIGG
ITTVHQVALSSLRLDGTITVGANVLYTCLAAVTAITTIFAMLYVARMDSF
AGVERVEHLKEVILKRHTISELKLKKGLGKRIAYMGKLHHVVAAGAILGT
GIMGTWALNVQGLTGDFVVTLSTSGIAYLAVYVLATSVVSCWLLFRVLVW
KPSTEYLRPLCSAFFAISLWSVDYIGKTVAVAFDRAEEGLERNGYGWSLE
ASRGTGGWLMIMMAFGAVITQYAIALELRLAYCGLQDTNLDLQLVAGTGA
PEERTRKTSAIHNNTKRRSTGGPSRSVPARSRRRSVAVHAAASCPGSPVS
PGSPFGSPMSTRSSISMTRTFSPTGTAGGGDGGGGFVQAAQITTSKGVVS
KVFQMGSNSLGGMMKKNSQLPRSIHVKPVTAKRESKMLVYEASVAEDPDE
DKHHPSQNITLPTVEQHPSPPMPELLLTPRDKPPSDSSLGWEIVGLTSEG
KG
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