prot_L-elsbetiae_contig8641.17677.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8641.17677.1
Unique Nameprot_L-elsbetiae_contig8641.17677.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length460
Homology
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BLAST of mRNA_L-elsbetiae_contig8641.17677.1 vs. uniprot
Match: D7G985_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G985_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 3.570e-6
Identity = 25/41 (60.98%), Postives = 28/41 (68.29%), Query Frame = 0 
Query:    1 MVNVHSKRCDQQGCTKTPSYGLDGSNKREFCFAHKKDGMVS 41
            M++V  KRC   GC K PSYG DGS KREFC  H + GMVS
Sbjct:    1 MIDVVCKRCGHLGCMKRPSYGTDGSKKREFCAQHSQQGMVS 41
[Close]
BLAST of mRNA_L-elsbetiae_contig8641.17677.1 vs. uniprot
Match: A0A6H5JV67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV67_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 4.380e-5
Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 0 
Query:    7 KRCDQQGCTKTPSYGLDGSNKREFCFAHKKDGMV 40
            + C  +GCTK PSYG++GS K+E+C  HKKDGMV
Sbjct:   31 RSCQAKGCTKRPSYGMEGSKKQEYCAEHKKDGMV 64
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8641.17677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G985_ECTSI3.570e-660.98EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JV67_9PHAE4.380e-561.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8641contigL-elsbetiae_contig8641:5265..7200 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8641.17677.1mRNA_L-elsbetiae_contig8641.17677.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8641 4407..7609 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8641.17677.1 ID=prot_L-elsbetiae_contig8641.17677.1|Name=mRNA_L-elsbetiae_contig8641.17677.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=460bp
MVNVHSKRCDQQGCTKTPSYGLDGSNKREFCFAHKKDGMVSMGSKRCGQQ
GCTTRPSYGVEGSSKSEFCSQHKIDGMVDVKNKKCGKQGCNKYALYGVKG
STKLEFCCEHKRGGMVNVRSKTCAHAGCTKRPSYAVDSGKTPEFCSQHKI
DGMVDIVSKRCGQLGCTKYPSYGLDGSSTPEFCAQHKRDGMVYITVKKRC
GQQGCTKLPSYGVEGSSKSEFCSVHKKGGMVDVRSKRCSQQGCTKHPSYG
MEGSSKSEFCCEHRKGGMVDIVSKRCGQLGCTKYPSYGLDGSSTSEFCSR
HKMDGMVNVKNKNKKRCGQQGCTKLPSYGVEGSSKSEFCSVHKKGGMVNV
RSKRCSQQGCTKHPSYGMEGSTKREFCCEHKKDGMIMIRRNSKRPSEGHG
MGRDTSEGDGPTVADDGTVRLAGTCRKRSCGSSTESVHQTPTVKAEPGVF
SIGRRGSWR*
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