prot_L-elsbetiae_contig863.17667.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig863.17667.1
Unique Nameprot_L-elsbetiae_contig863.17667.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length534
Homology
BLAST of mRNA_L-elsbetiae_contig863.17667.1 vs. uniprot
Match: D8LEC2_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC2_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 1.100e-61
Identity = 119/155 (76.77%), Postives = 129/155 (83.23%), Query Frame = 0
Query:   17 PPRLQIPDEPPKVMRRPPSKGNKRETLGDIAKRIPVQLMRQYFNYPLRAAAEAMHISVTTLKRLCRRHGVKRWPHRQISGINKALSDLEAQHEVAEGEEMLTVTEQLRQLHRRREVIIELAFESDDESCPSKGFDVARPAARKRVKRGSIASLDG 171
            PPRL IP EPPKV RR PSKGNKRETL DIAKRIPV LMR YFNYPLRAAAEAM ISVTTLKRLCRRHGVKRWPHRQI GIN+ L+DLE QH+ A+G+E+ +V +QLRQL+RRR+VIIELAFESDDES  S G D A PA RK  KRGS  S DG
Sbjct:   73 PPRLAIPHEPPKVPRRTPSKGNKRETLADIAKRIPVGLMRHYFNYPLRAAAEAMDISVTTLKRLCRRHGVKRWPHRQICGINRTLNDLETQHDTAKGDEVDSVADQLRQLYRRRDVIIELAFESDDESI-SNGSDDAPPAGRKLSKRGSFTSSDG 226          
BLAST of mRNA_L-elsbetiae_contig863.17667.1 vs. uniprot
Match: A0A6H5K716_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K716_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 5.370e-57
Identity = 114/157 (72.61%), Postives = 123/157 (78.34%), Query Frame = 0
Query:   17 PPRLQIPDEPPKVMRRPPSKGNKRETLGDIAKRIPVQLMRQYFNYPLRAAAEAMHISVTTLKRLCRRHGVKRWPHRQISGINKALSDLEAQHEVAEGEEMLTVTEQLRQLHRRREVIIELAFESDDESCPSKGFDVARPAARKRVKRGSIASLDGGG 173
            P RL IP EPPKV RR PSKGNKRETL DIAKRIPV+LMR YFNYPLRAAAEAM ISVTTLKRLCRRHGVKRWPHRQI GIN+ L+DLE QH+ A+G+E+ +V EQLRQLHRRR+VIIELAFESDDES                 KRGS  S DGGG
Sbjct:   85 PHRLTIPHEPPKVPRRTPSKGNKRETLADIAKRIPVELMRHYFNYPLRAAAEAMDISVTTLKRLCRRHGVKRWPHRQICGINRTLNDLETQHDTAKGDEVDSVAEQLRQLHRRRDVIIELAFESDDESIS---------------KRGSFISSDGGG 226          
BLAST of mRNA_L-elsbetiae_contig863.17667.1 vs. uniprot
Match: D7FN15_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN15_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 3.490e-53
Identity = 108/161 (67.08%), Postives = 123/161 (76.40%), Query Frame = 0
Query:    4 SQRSRAGEEGSLPPP--RLQIPDEPPKVMRRPPSK-GNKRETLGDIAKRIPVQLMRQYFNYPLRAAAEAMHISVTTLKRLCRRHGVKRWPHRQISGINKALSDLEAQHEVAEGEEMLT-VTEQLRQLHRRREVIIELAFESDDESCPSKGFDVARPAARKR 160
            S+ S  G E S  P   RL+IPDEPP +  R  SK G+KRE L DIAKRIPV+LMR+YFNYPLR +AEAMHISVTTLKRLCRRHGVKRWPHRQISG+N+ L DLEAQH+ A GEE +  V E+LRQLHRRREVIIE AFESDDES  +K      P  R++
Sbjct:   19 SKNSNNGTEDSRGPAVRRLRIPDEPPTLPPRDVSKAGSKREVLADIAKRIPVELMREYFNYPLRVSAEAMHISVTTLKRLCRRHGVKRWPHRQISGLNRTLGDLEAQHDAARGEEEIAAVEEELRQLHRRREVIIERAFESDDESTRNKDGAHLSPGVRRK 179          
BLAST of mRNA_L-elsbetiae_contig863.17667.1 vs. uniprot
Match: A0A6H5KFL8_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL8_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 2.890e-49
Identity = 103/144 (71.53%), Postives = 116/144 (80.56%), Query Frame = 0
Query:   19 RLQIPDEPPKVMRRPPSK-GNKRETLGDIAKRIPVQLMRQYFNYPLRAAAEAMHISVTTLKRLCRRHGVKRWPHRQISGINKALSDLEAQHEVAEGEEMLT-VTEQLRQLHRRREVIIELAFESDDESCPSKGFDVARPAARKR 160
            RL+IPDEPP +  R  SK G+KRE L DIAKRIPV+LMR+YFNYPLR +AEAMHISVTTLKRLCRRHGVKRWPHRQISG+N+AL DLEAQH+ A GEE +  V E+LRQLHRRREVIIE AFESDDES   K      P  R++
Sbjct:   37 RLRIPDEPPTLPPRDVSKAGSKREVLADIAKRIPVELMREYFNYPLRVSAEAMHISVTTLKRLCRRHGVKRWPHRQISGLNRALGDLEAQHDAARGEEEIAAVEEELRQLHRRREVIIERAFESDDESTRDKDCAHLSPGVRRK 180          
BLAST of mRNA_L-elsbetiae_contig863.17667.1 vs. uniprot
Match: A0A6H5JLN8_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN8_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 6.040e-38
Identity = 89/128 (69.53%), Postives = 103/128 (80.47%), Query Frame = 0
Query:   19 RLQIPDEPPKVMRRPPSKGNKRETLGDIAKRIPVQLMRQYFNYPLRAAAEAMHISVTTLKRLCRRHGVKRWPHRQISGINKALSDLEAQHEVA--EGEEMLT----VTEQLRQLHRRREVIIELAFES 140
            RL IP+ PP V RRPPSKGNKRETLGDIA RIPV +MR YFNYPLR AAEAM+ISVTTLKRLCRRHGVKRWPHRQISGIN+A++ LE Q + A     E+      V+EQ+++L RRR+V+IE AFES
Sbjct:  990 RLFIPETPPVVPRRPPSKGNKRETLGDIALRIPVTVMRPYFNYPLRTAAEAMNISVTTLKRLCRRHGVKRWPHRQISGINRAMAHLEFQQDQAGRRNSEITIRNNQVSEQMQELLRRRQVMIEHAFES 1117          
BLAST of mRNA_L-elsbetiae_contig863.17667.1 vs. uniprot
Match: D8LNV2_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV2_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 1.430e-33
Identity = 74/93 (79.57%), Postives = 81/93 (87.10%), Query Frame = 0
Query:   19 RLQIPDEPPKVMRRPPSKGNKRETLGDIAKRIPVQLMRQYFNYPLRAAAEAMHISVTTLKRLCRRHGVKRWPHRQISGINKALSDLEAQHEVA 111
            RL IP+ PP V RRPPSKGNKRETLGDIA RIPV +MR YFNYPLR AAEAM+ISVTTLKRLCRRHGVKRWPHRQISGIN+A++ LE Q + A
Sbjct:  764 RLFIPETPPVVPRRPPSKGNKRETLGDIAHRIPVTVMRPYFNYPLRTAAEAMNISVTTLKRLCRRHGVKRWPHRQISGINRAMAHLEFQQDQA 856          
BLAST of mRNA_L-elsbetiae_contig863.17667.1 vs. uniprot
Match: A0A6H5L9C1_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9C1_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 7.940e-30
Identity = 68/125 (54.40%), Postives = 93/125 (74.40%), Query Frame = 0
Query:   20 LQIPDEPPKVMRRPPSKGNKRETLGDIAKRIPVQLMRQYFNYPLRAAAEAMHISVTTLKRLCRRHGVKRWPHRQISGINKALSDLEAQHEVAEGEEMLTVTEQLRQLHRRREVIIELAFESDDES 144
            L +P  P K+ R+PP KG +RETL DIA+R+PV+++  YFN+ LR AA+AM ISVT+LKRLCRRHGVKRWPHRQ+SG+N+ +S LE +   +   +   +  QL +L+ RR+ +I+LAF SDD S
Sbjct:   24 LNLPKTPRKLARQPPLKGTRRETLQDIARRVPVEVLLPYFNFSLRTAADAMCISVTSLKRLCRRHGVKRWPHRQLSGLNRTVSHLEERQATSNDPD---IARQLARLYCRRDEVIDLAFTSDDNS 145          
BLAST of mRNA_L-elsbetiae_contig863.17667.1 vs. uniprot
Match: A0A835Z7T4_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T4_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.690e-15
Identity = 33/68 (48.53%), Postives = 54/68 (79.41%), Query Frame = 0
Query:   38 NKRETLGDIAKRIPVQLMRQYFNYPLRAAAEAMHISVTTLKRLCRRHGVKRWPHRQISGINKALSDLE 105
            +KR+T  ++AKR+PV ++ ++++ PL  AA  + +S+T LK+LCR++G+KRWPHRQ+S +NK+L  LE
Sbjct:    1 SKRQTSEEVAKRLPVSVLEEFYHVPLNIAARELSVSLTMLKKLCRQYGIKRWPHRQVSSLNKSLGKLE 68          
BLAST of mRNA_L-elsbetiae_contig863.17667.1 vs. uniprot
Match: D7FS12_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS12_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 1.630e-13
Identity = 43/108 (39.81%), Postives = 73/108 (67.59%), Query Frame = 0
Query:   39 KRETLGDIAKRIPVQLMRQYFNYPLRAAAEAMHISVTTLKRLCRRHGVKRWPHRQISGINKALSDLEAQHEVAE--GEEMLTVTEQLRQLHRRREVIIELAFESDDES 144
            KR+T  D+A R+P++++  +++ PL  AA+ +++S+T LK+LCR +GVKRWPHRQ+S ++K  S LE + +     G++  ++  +L Q  +RR+VII+ A    D S
Sbjct:  464 KRQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKIKTRRDGGKDAPSLVRKLTQARKRRKVIIKTASAGLDAS 571          
BLAST of mRNA_L-elsbetiae_contig863.17667.1 vs. uniprot
Match: A0A6H5KE17_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE17_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 2.580e-13
Identity = 41/101 (40.59%), Postives = 71/101 (70.30%), Query Frame = 0
Query:   39 KRETLGDIAKRIPVQLMRQYFNYPLRAAAEAMHISVTTLKRLCRRHGVKRWPHRQISGINKALSDLEAQHEVAE--GEEMLTVTEQLRQLHRRREVIIELA 137
            KR+T  D+A R+P++++  +++ PL  AA+ +++S+T LK+LCR +GVKRWPHRQ+S ++K  S LE + +     G++  ++  +L Q  +RR+VII+ A
Sbjct:  464 KRQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKIKARRDGGKDAPSLVRKLTQARKRRKVIIKTA 564          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig863.17667.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEC2_ECTSI1.100e-6176.77Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A6H5K716_9PHAE5.370e-5772.61RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FN15_ECTSI3.490e-5367.08Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A6H5KFL8_9PHAE2.890e-4971.53RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JLN8_9PHAE6.040e-3869.53RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LNV2_ECTSI1.430e-3379.57Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A6H5L9C1_9PHAE7.940e-3054.40RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z7T4_9STRA2.690e-1548.53RWP-RK domain-containing protein (Fragment) n=1 Ta... [more]
D7FS12_ECTSI1.630e-1339.81Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A6H5KE17_9PHAE2.580e-1340.59RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 94..114
NoneNo IPR availablePANTHERPTHR46373FAMILY NOT NAMEDcoord: 31..188
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 53..95
e-value: 1.6E-17
score: 63.2
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 33..117
score: 17.871

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig863contigL-elsbetiae_contig863:19245..23663 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig863.17667.1mRNA_L-elsbetiae_contig863.17667.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig863 19245..26199 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig863.17667.1 ID=prot_L-elsbetiae_contig863.17667.1|Name=mRNA_L-elsbetiae_contig863.17667.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=534bp
MYRSQRSRAGEEGSLPPPRLQIPDEPPKVMRRPPSKGNKRETLGDIAKRI
PVQLMRQYFNYPLRAAAEAMHISVTTLKRLCRRHGVKRWPHRQISGINKA
LSDLEAQHEVAEGEEMLTVTEQLRQLHRRREVIIELAFESDDESCPSKGF
DVARPAARKRVKRGSIASLDGGGGGSNSGSSASSSSSSCSSAPSSPSHSR
SASFASLASLPETKPQPGLGLGAWWQKSSGVDIGVAAAAALADTDKLVFS
SSGSSGSSSCSSSSSRSSSGSSCNSSSSSIIDGSGSSNGGGGKRPRRPSG
GPGAGKARVQRKPKSSAIFGTIVPPGKASLVGAAGVTTIPTATTTKHRRK
SSSTSSTSLARKSKTDSHPAPAPSRPAAAPESSPASAPPSACTGGGGRSG
GDDGKDSAGGSATAIATAIASASAPDASSASDLSSSLSGNMFGLGPQGTH
QMDDLSVIGDLLFGPDETAAAVAAAGARAQSLLAVRRTPSELSPSSISSY
DQGFSAGVASAASWANLFSGEANGWNSVDPLSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom