prot_L-elsbetiae_contig8600.17640.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8600.17640.1
Unique Nameprot_L-elsbetiae_contig8600.17640.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length290
Homology
BLAST of mRNA_L-elsbetiae_contig8600.17640.1 vs. uniprot
Match: A0A6H5JFI1_9PHAE (Transcription elongation factor SPT5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFI1_9PHAE)

HSP 1 Score: 525 bits (1351), Expect = 6.480e-180
Identity = 274/295 (92.88%), Postives = 283/295 (95.93%), Query Frame = 0
Query:    1 TGQSHADAIVHIQPLVEELAGEVVELKPDQLEKYLKVGGHVRIIDGRFTGETGTILKVVKNPDGASRAMVLTDMSSKELE-----LQETPEISTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNAGNAKMVRPQDIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGAKGTIKHIDRTTLFLHSRTHTVNGGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIKGQHKGLMGQVVEATDSHVKVELHSKLKKVFISRNQ 290
            TGQS ADA+VHIQPLVEELA EVVELKPDQLEKY+KVGGHVRIIDGRFTGETGTILK+VKNPDGASRAMVLTDMSSKELE     LQETPE+STGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNN+GN K VRPQ+IRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAG+KGTIKHIDRTTLFLHSRTHT N GIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVI+GQHKGLMGQVVEATD+HVKVELHSKLKKV ISRNQ
Sbjct:  353 TGQSQADAVVHIQPLVEELADEVVELKPDQLEKYIKVGGHVRIIDGRFTGETGTILKIVKNPDGASRAMVLTDMSSKELEVYVSQLQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQ 647          
BLAST of mRNA_L-elsbetiae_contig8600.17640.1 vs. uniprot
Match: D7FI29_ECTSI (Transcription elongation factor SPT5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI29_ECTSI)

HSP 1 Score: 529 bits (1362), Expect = 4.820e-179
Identity = 273/290 (94.14%), Postives = 283/290 (97.59%), Query Frame = 0
Query:    1 TGQSHADAIVHIQPLVEELAGEVVELKPDQLEKYLKVGGHVRIIDGRFTGETGTILKVVKNPDGASRAMVLTDMSSKELELQETPEISTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNAGNAKMVRPQDIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGAKGTIKHIDRTTLFLHSRTHTVNGGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIKGQHKGLMGQVVEATDSHVKVELHSKLKKVFISRNQ 290
            TGQS ADA+VHIQPLVEELA EVVELKPDQLEKY+KVGGHVRIIDGRFTGETGTILK+VKNPDGASRAMVLTDMSSKELELQETPE+STGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNN+GN K VRPQ+IRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAG+KGTIKHIDRTTLFLHSRTHT N GIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVI+GQHKGLMGQVVEATD+HVKVELHSKLKKV ISR+Q
Sbjct:  457 TGQSQADAVVHIQPLVEELADEVVELKPDQLEKYIKVGGHVRIIDGRFTGETGTILKIVKNPDGASRAMVLTDMSSKELELQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRSQ 746          
BLAST of mRNA_L-elsbetiae_contig8600.17640.1 vs. uniprot
Match: A0A7S1GNB8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNB8_CYCTE)

HSP 1 Score: 219 bits (557), Expect = 1.760e-63
Identity = 127/285 (44.56%), Postives = 182/285 (63.86%), Query Frame = 0
Query:   22 EVVELKPDQLEKYLKVGGHVRIIDGRFTGETGTILKVVKNPDGAS--RAMVLTDMSSKEL-----ELQETPEISTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNAGNAKMVRPQDIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGAKGTIKHIDRTTLFLHSRTHTVNGGIFPVRARSALLAGRMNR-----GQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIKGQHKGLMGQVVEATDSHVKVELHSKLKKVFISRNQ 290
            E VE    Q+ KY+ VG HV+++DGR+  ETG ++  V+  +G +   A+VLTD+++KE+     +L+E+ E+++G D L GYELYDLV+L      NEVGV+ RV RED  VVNN G ++ VRP+++RGK+N +S RA  VD Q NQ+ V + V V EG H G   TIK ++RT LFL+S+T T N GIF VR+RS +LAG  ++     G   V       + +          R+D ++ KTV++  GQ KG +G V +AT SHV+VELHS+LKKV ++R +
Sbjct:   19 EEVEFLSSQVRKYIAVGAHVKVMDGRYANETGNVV-AVEQLEGETDCTAVVLTDITNKEITVRTSQLRESAEMASGQDKLAGYELYDLVVLSGGGSTNEVGVIVRVGREDFTVVNNHGISREVRPEELRGKQNQRSNRALAVDVQANQIRVGDQVTVTEGPHKGKTATIKRMNRTQLFLYSQTRTENAGIFVVRSRSVMLAGSRSQRSSGGGDGGVSPFSTPRSQSSGPPGGARGKRDDALIGKTVRIQSGQWKGYLGTVADATASHVQVELHSRLKKVMVTRER 302          
BLAST of mRNA_L-elsbetiae_contig8600.17640.1 vs. uniprot
Match: A0A7S2VA26_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VA26_9STRA)

HSP 1 Score: 214 bits (546), Expect = 8.090e-62
Identity = 125/295 (42.37%), Postives = 187/295 (63.39%), Query Frame = 0
Query:   10 VHIQPLVEELAGEVVELKPDQLEKYLKVGGHVRIIDGRFTGETGTILKVVKNPDGAS--RAMVLTDMSSKEL-----ELQETPEISTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNAGNAKMVRPQDIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGAKGTIKHIDRTTLFLHSRTHTVNGGIFPVRARSALLAGRMNRGQAAVGYMGEIN---ASAKNDIVKDFRNRNDEMLAKTVKVIKGQHKGLMGQVVEATDSHVKVELHSKLKKVFISRNQ 290
            V +QP    +  E+ E    Q+ KY+ +G HV++ DGR+  ETGT++  V+  DGA    A+VLTD+++KE+     +L+E+ E +TG D LQGYELYDLV+L      NEVGV+ RV RED  V+NN G A+  RP+++RGKRN+ S+RA  +D Q NQL   + V VVEG+H G   T+K ++R+ LFLHS+T + + G+F V++RS +LAG  ++ +   G  G       S +       R R+D ++ KTV++  G  KG +G V + T +HV+VELH++LKKV ++  +
Sbjct:   36 VKVQPNDPNVTDEI-EFLASQVRKYIAMGSHVKVTDGRYANETGTVV-AVEQMDGAQDFTAVVLTDITNKEITVRISQLRESAETTTGQDKLQGYELYDLVVLSGGGSANEVGVIVRVGREDFTVINNHGIAREARPEELRGKRNAMSQRAVALDVQGNQLRSGDTVNVVEGRHKGKAATVKRMNRSQLFLHSQTRSEHAGVFVVKSRSCVLAGSRSQSRPGAGDGGATPWTPQSHQTGRPGAGRKRDDGLIGKTVRIQAGNWKGFIGTVSDTTGTHVEVELHARLKKVTVTHER 328          
BLAST of mRNA_L-elsbetiae_contig8600.17640.1 vs. uniprot
Match: B7G376_PHATC (Transcription elongation factor SPT5 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G376_PHATC)

HSP 1 Score: 218 bits (555), Expect = 6.790e-61
Identity = 125/283 (44.17%), Postives = 180/283 (63.60%), Query Frame = 0
Query:   24 VELKPDQLEKYLKVGGHVRIIDGRFTGETGTILKVVKNPDGAS--RAMVLTDMSSKEL-----ELQETPEISTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNAGNAKMVRPQDIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGAKGTIKHIDRTTLFLHSRTHTVNGGIFPVRARSALLAGRMNRGQAA-----VGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIKGQHKGLMGQVVEATDSHVKVELHSKLKKVFISRNQ 290
            +E   +QL KY+ VG HV++ DGR+  ETG ++  V+  DG +   A+VLTD+++KE+     +L+E+ E+++G D LQGYELYDLV+L      NEVGV+ RV RED  V+NN G  + +RP+++RGKRNS S+RA  +D Q NQ+   + V VVEG H G   TIK + R  LFLHS+T T + GIF VR+RS +LAG   + + A     V       + ++         R+D ++ KTV++  GQ KG +G V +AT +HV+VELHS+LKKV + R +
Sbjct:  525 IEFLGNQLRKYIPVGAHVKVTDGRYANETGVVV-AVEQLDGETDFTAVVLTDVTNKEISVRTSQLRESAEVASGQDKLQGYELYDLVVLSGGGSANEVGVIVRVGREDFTVINNHGIVREIRPEELRGKRNSTSQRAVALDVQGNQIRASDSVNVVEGPHKGKTATIKRMSRAQLFLHSQTRTDHAGIFVVRSRSCVLAGTRTQARGATPDSGVSPFATPQSQSRGGPQPGRGKRDDGLIGKTVRIQAGQWKGYLGTVADATATHVQVELHSRLKKVMVVRER 806          
BLAST of mRNA_L-elsbetiae_contig8600.17640.1 vs. uniprot
Match: A0A7S2V7W2_9STRA (Transcription elongation factor SPT5 n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V7W2_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.130e-59
Identity = 125/295 (42.37%), Postives = 187/295 (63.39%), Query Frame = 0
Query:   10 VHIQPLVEELAGEVVELKPDQLEKYLKVGGHVRIIDGRFTGETGTILKVVKNPDGAS--RAMVLTDMSSKEL-----ELQETPEISTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNAGNAKMVRPQDIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGAKGTIKHIDRTTLFLHSRTHTVNGGIFPVRARSALLAGRMNRGQAAVGYMGEIN---ASAKNDIVKDFRNRNDEMLAKTVKVIKGQHKGLMGQVVEATDSHVKVELHSKLKKVFISRNQ 290
            V +QP    +  E+ E    Q+ KY+ +G HV++ DGR+  ETGT++  V+  DGA    A+VLTD+++KE+     +L+E+ E +TG D LQGYELYDLV+L      NEVGV+ RV RED  V+NN G A+  RP+++RGKRN+ S+RA  +D Q NQL   + V VVEG+H G   T+K ++R+ LFLHS+T + + G+F V++RS +LAG  ++ +   G  G       S +       R R+D ++ KTV++  G  KG +G V + T +HV+VELH++LKKV ++  +
Sbjct:  491 VKVQPNDPNVTDEI-EFLASQVRKYIAMGSHVKVTDGRYANETGTVV-AVEQMDGAQDFTAVVLTDITNKEITVRISQLRESAETTTGQDKLQGYELYDLVVLSGGGSANEVGVIVRVGREDFTVINNHGIAREARPEELRGKRNAMSQRAVALDVQGNQLRSGDTVNVVEGRHKGKAATVKRMNRSQLFLHSQTRSEHAGVFVVKSRSCVLAGSRSQSRPGAGDGGATPWTPQSHQTGRPGAGRKRDDGLIGKTVRIQAGNWKGFIGTVSDTTGTHVEVELHARLKKVTVTHER 783          
BLAST of mRNA_L-elsbetiae_contig8600.17640.1 vs. uniprot
Match: A0A7S2LCY0_9STRA (Transcription elongation factor SPT5 n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LCY0_9STRA)

HSP 1 Score: 214 bits (545), Expect = 2.200e-59
Identity = 126/283 (44.52%), Postives = 177/283 (62.54%), Query Frame = 0
Query:   24 VELKPDQLEKYLKVGGHVRIIDGRFTGETGTILKVVKNPDGAS-RAMVLTDMSSKEL-----ELQETPEISTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNAGNAKMVRPQDIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGAKGTIKHIDRTTLFLHSRTHTVNGGIFPVRARSALLAGRMNRGQAAV------GYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIKGQHKGLMGQVVEATDSHVKVELHSKLKKVFISRNQ 290
            +E    Q+ KY+  G HV+++DGR+  ETGT++ +  +  G    A+VLTD++ KE+     +LQE+ EI++G D L GYEL+DLV+L      NEVGV+ RV RE+  V+NN G  + VRP+++RGKRNS SRRA  +D Q NQ+ V + V V EG H G   TIK ++R  LFL+S+T T + GIF VR+RS +L+G  NR           G+ G   A  +   +K    R D ++ KTV+V  GQ KG +G V +AT +HV VELHS+LKKV + R +
Sbjct:  596 IEFLMGQVRKYIPTGAHVKVMDGRYANETGTVVAIDDSMGGNDCLAVVLTDLTHKEISVRTSQLQESAEIASGQDKLAGYELHDLVVLSGGGSTNEVGVIVRVGREEFTVINNHGIVREVRPEELRGKRNSSSRRAVALDVQGNQIRVGDSVNVAEGPHKGKTATIKQMNRAQLFLYSQTRTEHAGIFVVRSRSCVLSGARNRSSMETANANGNGFKGGGGAGGRG--IK----REDGLIGKTVRVSSGQWKGYIGTVADATATHVSVELHSRLKKVMVLRER 872          
BLAST of mRNA_L-elsbetiae_contig8600.17640.1 vs. uniprot
Match: A0A1Z5KC20_FISSO (Transcription elongation factor SPT5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KC20_FISSO)

HSP 1 Score: 213 bits (543), Expect = 3.150e-59
Identity = 128/283 (45.23%), Postives = 180/283 (63.60%), Query Frame = 0
Query:   24 VELKPDQLEKYLKVGGHVRIIDGRFTGETGTILKVVKNPDGAS--RAMVLTDMSSKEL-----ELQETPEISTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNAGNAKMVRPQDIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGAKGTIKHIDRTTLFLHSRTHTVNGGIFPVRARSALLAG--RMNRGQAAVGYMGEI---NASAKNDIVKDFRNRNDEMLAKTVKVIKGQHKGLMGQVVEATDSHVKVELHSKLKKVFISRNQ 290
            VE    Q+ KY+ VG HV++ DGR+  ETG ++ V K  DG S   A+VLTD+++KE+     +L+E+ EI++G D L GYELYDLV+L      NEVGV+ RV RED  V+NN G A+ VRP+++RGKRNS S RA  +D Q NQ+   ++V V EG H G   TIK + R  LFLHS+T + + GIF VR+RS +L+G  + +RG    G +       + +    V    N++D ++ KTV+V  GQ KG +G V + T +HV+VELHS+LKKV + R +
Sbjct:  542 VEFLIGQVRKYIPVGAHVKVTDGRYANETGVVVAVEKL-DGESDFTAVVLTDVTNKEVSVRTSQLRESAEIASGQDRLSGYELYDLVVLSGGGSANEVGVIVRVGREDFTVINNHGLAREVRPEELRGKRNSTSVRAVALDVQGNQIRCGDIVNVAEGPHKGKAATIKRMSRAQLFLHSQTRSEHAGIFVVRSRSCVLSGSRQQSRGSGIDGGVSPFATPQSQSTRGPVGGRGNKDDGLIGKTVRVQAGQWKGYIGTVADTTATHVQVELHSRLKKVLVVREK 823          
BLAST of mRNA_L-elsbetiae_contig8600.17640.1 vs. uniprot
Match: A0A7S2GRM5_9STRA (50S ribosomal protein L24, chloroplastic (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GRM5_9STRA)

HSP 1 Score: 199 bits (506), Expect = 2.210e-58
Identity = 117/268 (43.66%), Postives = 167/268 (62.31%), Query Frame = 0
Query:   33 KYLKVGGHVRIIDGRFTGETGTILKVVK-NPDGASRAMVLTDMSSKEL-----ELQETPEISTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNAGNAKMVRPQDIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGAKGTIKHIDRTTLFLHSRTHTVNGGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIKGQHKGLMGQVVEATDSHVKVELHSKLKKVFISRNQ 290
            KY+ VG HV++ DGR+  ETG ++ V +   D    A+V+TDM+ KE+     +LQE+ E+++G D L GYEL+DLV+L      NEVGV+ RV RE+  V+NN G  + VRP+++RGKRNS S+RA  +D Q NQ+   ++V + EG H G   TIK + R  LFL+S+T T + GIF VR+RS +L+G   R  AA     +             R   D ++ KTVKV  G+ KG +G V +AT +HV+VELHS++KKV + R +
Sbjct:    2 KYIAVGPHVKVTDGRYANETGIVVAVEELEGDTDCIAVVMTDMTHKEVSVRTSQLQESAEVASGQDKLAGYELHDLVVLSGGGSANEVGVIVRVGREEFTVINNHGIVREVRPEELRGKRNSSSQRAVALDVQGNQIRCGDLVSIAEGPHKGKTATIKRMSRAQLFLYSQTRTEHAGIFVVRSRSCVLSGSRARPAAADTRQSQ----GGXXXXXXXRRGEDGLVGKTVKVQSGKWKGYLGCVSDATATHVQVELHSRMKKVMVVRER 265          
BLAST of mRNA_L-elsbetiae_contig8600.17640.1 vs. uniprot
Match: A0A6S8Z740_9STRA (Transcription elongation factor SPT5 n=9 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8Z740_9STRA)

HSP 1 Score: 210 bits (534), Expect = 5.670e-58
Identity = 126/303 (41.58%), Postives = 186/303 (61.39%), Query Frame = 0
Query:   10 VHIQPLVEELAGE--------VVELKPDQLEKYLKVGGHVRIIDGRFTGETGTILKVVKNPDGAS--RAMVLTDMSSKEL-----ELQETPEISTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNAGNAKMVRPQDIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGAKGTIKHIDRTTLFLHSRTHTVNGGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKN---DIVKDFRNRNDEMLAKTVKVIKGQHKGLMGQVVEATDSHVKVELHSKLKKVFISRNQ 290
            V ++P+ E+ +GE         VE    Q+ K++ VG HV+++ GR+  ETGT++ V K  DG S   A +LTDM+ KE+     +LQE+ E+++G D L GYEL+DLV+L      NEVG + RV RE+  V+NN G  + VRP+++RGKRNS S RA  +D Q NQ+ V + V+V EG H G   TIK + R  LFL+S+T T N G+F VR+RS +L+G   + + A G     +    N    I      ++D +++KTV++  G  KG +G V +AT +HV+VELHS+LKK+ + R +
Sbjct:  490 VKVRPIAEDGSGEDLTEMTMNEVEFLVSQVRKHIAVGAHVKVLSGRYANETGTVVAVEKL-DGESDFTAALLTDMTHKEVLVRISQLQESAEVASGQDKLAGYELHDLVVLSGGGSTNEVGCIVRVGREEFTVINNHGIIREVRPEELRGKRNSSSGRAVALDVQGNQIRVGDTVKVAEGPHKGKSATIKRMSRAQLFLYSQTLTKNAGVFVVRSRSCVLSGNRVQNREAPGGASPFSTPRSNGNQQIGARGGRKDDGLISKTVRIQAGNWKGYLGTVSDATPTHVQVELHSRLKKIMVLRER 791          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8600.17640.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFI1_9PHAE6.480e-18092.88Transcription elongation factor SPT5 n=1 Tax=Ectoc... [more]
D7FI29_ECTSI4.820e-17994.14Transcription elongation factor SPT5 n=1 Tax=Ectoc... [more]
A0A7S1GNB8_CYCTE1.760e-6344.56Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2VA26_9STRA8.090e-6242.3750S ribosomal protein L24, chloroplastic n=1 Tax=A... [more]
B7G376_PHATC6.790e-6144.17Transcription elongation factor SPT5 n=2 Tax=Phaeo... [more]
A0A7S2V7W2_9STRA1.130e-5942.37Transcription elongation factor SPT5 n=1 Tax=Amphi... [more]
A0A7S2LCY0_9STRA2.200e-5944.52Transcription elongation factor SPT5 n=2 Tax=Lepto... [more]
A0A1Z5KC20_FISSO3.150e-5945.23Transcription elongation factor SPT5 n=2 Tax=Fistu... [more]
A0A7S2GRM5_9STRA2.210e-5843.6650S ribosomal protein L24, chloroplastic (Fragment... [more]
A0A6S8Z740_9STRA5.670e-5841.58Transcription elongation factor SPT5 n=9 Tax=Chaet... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 244..271
e-value: 22.0
score: 11.9
coord: 158..185
e-value: 0.0024
score: 27.1
coord: 34..61
e-value: 4.6E-5
score: 32.8
IPR005824KOWPFAMPF00467KOWcoord: 161..186
e-value: 3.4E-6
score: 26.8
coord: 37..61
e-value: 6.8E-6
score: 25.8
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 36..84
e-value: 5.4E-9
score: 37.5
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 230..290
e-value: 6.3E-16
score: 59.6
NoneNo IPR availablePANTHERPTHR11125:SF7TRANSCRIPTION ELONGATION FACTOR SPT5coord: 12..289
IPR039659Transcription elongation factor SPT5PANTHERPTHR11125SUPPRESSOR OF TY 5coord: 12..289
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 26..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8600contigL-elsbetiae_contig8600:874..6595 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8600.17640.1mRNA_L-elsbetiae_contig8600.17640.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8600 874..6595 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8600.17640.1 ID=prot_L-elsbetiae_contig8600.17640.1|Name=mRNA_L-elsbetiae_contig8600.17640.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=290bp
TGQSHADAIVHIQPLVEELAGEVVELKPDQLEKYLKVGGHVRIIDGRFTG
ETGTILKVVKNPDGASRAMVLTDMSSKELELQETPEISTGLDSLQGYELY
DLVMLGPNEVGVVTRVNREDLEVVNNAGNAKMVRPQDIRGKRNSQSRRAF
VVDTQQNQLEVDNVVEVVEGQHAGAKGTIKHIDRTTLFLHSRTHTVNGGI
FPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKT
VKVIKGQHKGLMGQVVEATDSHVKVELHSKLKKVFISRNQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005824KOW
IPR014722Rib_L2_dom2
IPR039659SPT5
IPR008991Translation_prot_SH3-like_sf