prot_L-elsbetiae_contig8588.17623.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8588.17623.1
Unique Nameprot_L-elsbetiae_contig8588.17623.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length428
Homology
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BLAST of mRNA_L-elsbetiae_contig8588.17623.1 vs. uniprot
Match: A0A6H5JTZ0_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ0_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 1.640e-103
Identity = 210/363 (57.85%), Postives = 250/363 (68.87%), Query Frame = 0 
Query:    1 MEIPSPPRFDGLVKAVMEAHAVPSGNEKDLTFTYRDNEGDEVRFDTDGELDLAVRTSSVPLRIMVQ--------VQNARSRPAASTGGNLQAAAAASSSTVPSTPGYAVASNVGSVLGD-DDTDMVMVDVPNGDAFVSGARAGTAXXXXXXXXXXXXSEPVKNKAEEIDAPAAFEAEAAAARDPEGSMLYQKASIRLAKRSKVHLTPTQLWRVMALFQIQGRQLVIFGLAPHKALD------TDADPSAASGAXXXXXXXXXXXXXXXGLKRSKDHVARGLVADPVQRLLSLNGVDLPEEEVQPLLEALRVRPRRLVRLNLLPPDVLQDMPDDH--REGRGLRG------RHMHGHGPGGRFS 340
            MEIP+PPRFD LVK VM+A+++P+G E+ LTFTY+DN+GDEVRFDT+ ELDLA+RTSSVPLRIMV            +RS P      N +A +AA  S +PSTPGYAVASNVGS +G  D+ DM+MVD+P   A  +   +G +            S+    + E I+  AAFEAEAAAARDPEGS+LYQKAS+RLAKR KVHLTPTQLWRVMALFQIQGRQLV+FGLAPH++LD      +D D S   G                GLKRSK  VA  +VAD VQRLL LNGV+LPE+EVQPLL+ALRVR RRLVRL LL P+ L+DMPD H  R+ +G RG       H HGHGPGGRF+
Sbjct:   16 MEIPNPPRFDELVKTVMDAYSMPAGVEQQLTFTYKDNDGDEVRFDTNAELDLAIRTSSVPLRIMVANPPXXXXXXXXSRSTP------NPEATSAAPPS-IPSTPGYAVASNVGSAVGGGDEPDMIMVDMPGEAAAAAAGPSGGSVDG---------SQADGPEKEAINPQAAFEAEAAAARDPEGSLLYQKASMRLAKRFKVHLTPTQLWRVMALFQIQGRQLVVFGLAPHRSLDAAAAAASDLDSSDEEGGENKPSAVR-------GLKRSKSQVAGTIVADHVQRLLGLNGVELPEDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDAKGPRGGPPGHPMHGHGHGPGGRFA 355
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BLAST of mRNA_L-elsbetiae_contig8588.17623.1 vs. uniprot
Match: D8LFK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK7_ECTSI)

HSP 1 Score: 308 bits (790), Expect = 6.870e-98
Identity = 203/344 (59.01%), Postives = 234/344 (68.02%), Query Frame = 0 
Query:   17 MEAHAVPSGNEKDLTFTYRDNEGDEVRFDTDGELDLAVRTSSVPLRIMVQ------------VQNARSRPAASTGGNLQAAAAASSSTVPSTPGYAVASNVGSVLGD-DDTDMVMVDVPNGDAFVSGARAGTAXXXXXXXXXXXXSEPVKNKAEEIDAPAAFEAEAAAARDPEGSMLYQKASIRLAKRSKVHLTPTQLWRVMALFQIQGRQLVIFGLAPHKALDTDADPSAASGAXXXXXXXXXXXXXXXGLKRSKDHVARGLVADPVQRLLSLNGVDLPEEEVQPLLEALRVRPRRLVRLNLLPPDVLQDMPDDH--REGRGLRG----RHMHGHG--PGGRF 339
            MEA+++P+G EK LTFTY+DNEGDEVRFDT+ ELDLA+RTSSVPLRIMV                 RS P      N +A +AA  S +PSTPGYAVASNVGSV+G  DD DM+MVD+P G+A    A A  A              P K   E I+  AAFEAEAAAARDPEGS+LYQK+S+RLAKR KVHLTPTQLWRVMALFQIQGRQLV+FGLAPH++LD  A  +A+                  GLKRSK  VAR +VAD VQRLL LNGV+LP +EVQPLL+ALRVR RRLVRL LL P+ L+DMPD H  R+G+G RG      MHGH   PGGRF
Sbjct:    1 MEAYSLPAGVEKQLTFTYKDNEGDEVRFDTNAELDLALRTSSVPLRIMVANPXXXXXXXXXXXXXXRSTP------NPEATSAAPPS-IPSTPGYAVASNVGSVVGGGDDADMIMVDMP-GEA----AAAAAAGPSGGSVDGSQADGPEK---EAINPQAAFEAEAAAARDPEGSLLYQKSSMRLAKRFKVHLTPTQLWRVMALFQIQGRQLVVFGLAPHRSLDASASAAASDVDSSDEEGGENKPSAVRGLKRSKSQVARTIVADHVQRLLILNGVELPGDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDGKGPRGGPPGHPMHGHXXXPGGRF 329
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8588.17623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTZ0_9PHAE1.640e-10357.85PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LFK7_ECTSI6.870e-9859.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainPFAMPF00564PB1coord: 2..67
e-value: 8.7E-8
score: 32.0
IPR000270PB1 domainPROSITEPS51745PB1coord: 1..68
score: 14.687
NoneNo IPR availableGENE3D3.10.20.90coord: 2..68
e-value: 7.8E-6
score: 27.7
NoneNo IPR availableSUPERFAMILY54277CAD & PB1 domainscoord: 7..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8588contigL-elsbetiae_contig8588:2111..4023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8588.17623.1mRNA_L-elsbetiae_contig8588.17623.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8588 2103..4023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8588.17623.1 ID=prot_L-elsbetiae_contig8588.17623.1|Name=mRNA_L-elsbetiae_contig8588.17623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=428bp
MEIPSPPRFDGLVKAVMEAHAVPSGNEKDLTFTYRDNEGDEVRFDTDGEL
DLAVRTSSVPLRIMVQVQNARSRPAASTGGNLQAAAAASSSTVPSTPGYA
VASNVGSVLGDDDTDMVMVDVPNGDAFVSGARAGTAGGGAGNDGGGDGSE
PVKNKAEEIDAPAAFEAEAAAARDPEGSMLYQKASIRLAKRSKVHLTPTQ
LWRVMALFQIQGRQLVIFGLAPHKALDTDADPSAASGASSDEEGGAAAAA
RGGGLKRSKDHVARGLVADPVQRLLSLNGVDLPEEEVQPLLEALRVRPRR
LVRLNLLPPDVLQDMPDDHREGRGLRGRHMHGHGPGGRFSVGRPGRGRGG
GRGAPPMPFHPPPPFFNQHHQGGAFSGPHGGGSEDGNPPHHVPPPHMMGR
GRPHMEPPHGHHHRGHMDGEGPHHPPHR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom