prot_L-elsbetiae_contig8561.17597.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8561.17597.1
Unique Nameprot_L-elsbetiae_contig8561.17597.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length250
Homology
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BLAST of mRNA_L-elsbetiae_contig8561.17597.1 vs. uniprot
Match: A0A6H5JMD5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMD5_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 5.840e-75
Identity = 126/168 (75.00%), Postives = 140/168 (83.33%), Query Frame = 0 
Query:   85 MCTLNVNAPIFTPN----QRIAQPIFNGGAQSCVRLLLIDSDEYREEFLFNNFNREMVHDEDLFNPAVYPVSAADHEELAAAESFNREMAELAELEHQHELRSLLQARITALQLGT-GKQRPAKIASLDSAMFSGRSRGAPAAALRGKQLNPAKKCPHNINQPLQTGR 247
            M TLN NAP F P+    Q++ +PIFN G  SCV  L++DSDEYR EFL N FNRE V DEDLFNPAVYPVSAADHEEL AAE+FNREMAEL  LEHQ ELRSLLQARI+ALQ GT GKQRPAKIAS++SAMFSG SRGAPA+ L+GK+ NPAKKCPHNINQPL+TGR
Sbjct:    1 MFTLNANAPSFVPSNPVHQQMVRPIFNSGVPSCV--LILDSDEYRSEFLVNTFNREAVADEDLFNPAVYPVSAADHEELTAAENFNREMAELEALEHQEELRSLLQARISALQQGTSGKQRPAKIASMNSAMFSGLSRGAPASGLKGKRFNPAKKCPHNINQPLETGR 166
[Close]
BLAST of mRNA_L-elsbetiae_contig8561.17597.1 vs. uniprot
Match: A0A835Z899_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z899_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.930e-7
Identity = 53/155 (34.19%), Postives = 65/155 (41.94%), Query Frame = 0 
Query:   88 LNVNAPIFTPNQRIAQPIFNGGAQSCVRLLLIDSDEYREEFLFNNFNREMVHDEDLFNPAVYPVSAADHEELAAAESFNREMAELAELEHQHELRSLLQARITALQLGT-----GKQRPAKIASLDSAMFSGRSRGAPAAALRGKQLNPAKKCPH 237
            LN NA  + P      PIFNG  QSCV L           F    F+R MV D DLFNPA +P+  AD  E+ A E  N E+A          L  LL  R+ AL+         +Q PA  A            GA  A    +  N A++ PH
Sbjct:    2 LNPNAQEYVP----PMPIFNGDLQSCVIL----------GFQGQMFDRNMVDDNDLFNPAAFPMQDADFLEIEATEEMNAELAXXXXXXXXXXLTELLHKRLEALRRARLRRFGAEQTPAPRAXXXXXXXX--XLGATDAVAVSRHANNARRAPH 140
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8561.17597.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JMD5_9PHAE5.840e-7575.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z899_9STRA1.930e-734.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8561contigL-elsbetiae_contig8561:3626..6183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8561.17597.1mRNA_L-elsbetiae_contig8561.17597.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8561 780..7738 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8561.17597.1 ID=prot_L-elsbetiae_contig8561.17597.1|Name=mRNA_L-elsbetiae_contig8561.17597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=250bp
MMISLCEVRVSKLVRFPPCCTSSQTSLRNQVPLPTWPSLILKIQHSAERV
HTPSVCAKCAPFFGNEHVQHTLLPLTETPDTSTTMCTLNVNAPIFTPNQR
IAQPIFNGGAQSCVRLLLIDSDEYREEFLFNNFNREMVHDEDLFNPAVYP
VSAADHEELAAAESFNREMAELAELEHQHELRSLLQARITALQLGTGKQR
PAKIASLDSAMFSGRSRGAPAAALRGKQLNPAKKCPHNINQPLQTGRNN*
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