prot_L-elsbetiae_contig856.17593.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig856.17593.1
Unique Nameprot_L-elsbetiae_contig856.17593.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length204
Homology
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A6H5KF19_9PHAE (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF19_9PHAE)

HSP 1 Score: 323 bits (829), Expect = 8.160e-111
Identity = 161/189 (85.19%), Postives = 174/189 (92.06%), Query Frame = 0
Query:   17 DEERRHDRSFVER--PGSRSLPPNMGSRLPFFLPWVPKPAAGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQPLQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 203
            D ERRHD    ++   GSRSL P +GSRLPFFLPWVP+PAAGAAD +P+PPVLTESCGFKLIMGTVGGAGMGFVFG+FLGAMGDMQPLQM+NGREVPQAP REQAR+AYKQTA+RSLS+GRNFA+FSA+FMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGP AACFGCVGMA FSA MDKLMGH
Sbjct:    4 DGERRHDECCKQQGTEGSRSLHPQLGSRLPFFLPWVPRPAAGAADAMPTPPVLTESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQPLQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 192          
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A836C710_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C710_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.690e-62
Identity = 101/142 (71.13%), Postives = 115/142 (80.99%), Query Frame = 0
Query:   62 PSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQPLQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 203
            P PP L ESCG +LIMGT GG GMG +FG+FLGAMGDMQP+Q++NGREVPQAPL EQAR AY  T  RSL + +NFA+FSA+FM SECVIEKMRGK DMMNSVY GC TG AFG+K GP  A  GC+GMAAFSA +D +MGH
Sbjct:   58 PQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 199          
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A7S2P255_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P255_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.170e-47
Identity = 90/195 (46.15%), Postives = 119/195 (61.03%), Query Frame = 0
Query:   11 PLVTMADEERRHDRSFVERPGSRSLPPNMGS-RLPFFLPWVPKPAAGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 203
            P   +A     ++R   +      L P   + RLP+ +PW+P    GA +  P    +TESCG K  +G  GGA MG + G+FLGAM DM P + ++NG+EVPQAPL+EQAR   + T E+ +   RNFA  + +F GSEC++EK RGK D+ N V +GC TGAA   KQGP AA  GC G AAFS  +D +MGH
Sbjct:   27 PSTELAQSFYNNERVLQKPVPKEQLNPYFNTTRLPYLIPWMPT-FNGAQEPPPDFSFMTESCGIKSAIGLFGGAAMGLLMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQARTVMRATGEKCVYWSRNFAFITGVFAGSECLVEKARGKHDVWNQVLSGCVTGAAIQAKQGPQAAALGCGGFAAFSLVIDAVMGH 220          
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A6U3RYY1_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RYY1_9STRA)

HSP 1 Score: 158 bits (399), Expect = 1.450e-44
Identity = 88/188 (46.81%), Postives = 115/188 (61.17%), Query Frame = 0
Query:   16 ADEERRHDRSFVERPGSRSLPPNMGSRLPFFLPWVPKPAAGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMG 202
            +   + H R+  +     SL       LP+F PW  KP +G     P    L+ESCG K  +G  GG  MG + G+FLGAM DM P + ++ G+EVPQAPL+EQ R   + TAE+S+   R FA  + +F GSEC++EK RGKTD+ NSV +GC TGAA   K GPS+A FGC G AAFS  +D +MG
Sbjct:   78 SSNSKLHQRAENDANKDMSLSTLTSKSLPYFQPW--KPTSGPEQLPPDFTFLSESCGGKAAIGVFGGGVMGLLMGVFLGAMSDMTPPVTVIGGKEVPQAPLKEQMRTTMRATAEKSMYWCRQFAFITGVFSGSECLVEKYRGKTDVWNSVLSGCVTGAAMQAKAGPSSAAFGCGGFAAFSLVIDSVMG 263          
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A1Z5K7I7_FISSO (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7I7_FISSO)

HSP 1 Score: 151 bits (382), Expect = 4.740e-42
Identity = 83/162 (51.23%), Postives = 105/162 (64.81%), Query Frame = 0
Query:   43 LPFFLPWVPKPAAGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 203
            LP+ LPW  KP A   +  P    LT SC  K+ +G +GGAGMG + G+FLGA+ D  P +Q++ GR+VPQAPLREQ RV  + TAE+S     NFA  + +F GSEC++EK RGK D+ NSV +GC TGAA   K GP +A  GC G AAFS  +D  M H
Sbjct:  104 LPYPLPW--KPVASPTEPPPDFSWLTGSCAGKVAIGVIGGAGMGALMGLFLGALSDTTPPVQVIGGRDVPQAPLREQMRVVMRATAEKSRYWAGNFAFITGVFAGSECLVEKYRGKNDLWNSVASGCITGAAMQAKAGPQSAALGCGGFAAFSLVIDSFMHH 263          
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A7S1TYW7_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYW7_9STRA)

HSP 1 Score: 148 bits (374), Expect = 9.980e-42
Identity = 79/162 (48.77%), Postives = 100/162 (61.73%), Query Frame = 0
Query:   43 LPFFLPWVPKPAAGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 203
            +P F P  P P         +P    ESC  + ++G+  G  MG V G+FLGAMGD+ P +  V G+E PQ PL EQAR AY+ TAERS+   R+F   +A+F G+ECVIEK RG+ D  N V +GCA GA      GP+AAC GC G AAFSAA + +MGH
Sbjct:   37 VPIFTPATPHPGV-------NPGWAAESCVGRAVLGSFAGGAMGLVLGVFLGAMGDLNPPIYFVKGKEAPQPPLAEQARTAYRTTAERSIGFARSFFALTALFSGTECVIEKFRGRHDGWNPVLSGCAAGAMMSASGGPTAACMGCAGFAAFSAAAEAVMGH 191          
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A7S2AAN4_TRICV (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAN4_TRICV)

HSP 1 Score: 147 bits (370), Expect = 2.750e-40
Identity = 79/164 (48.17%), Postives = 100/164 (60.98%), Query Frame = 0
Query:   43 LPFFLPWVPKPAAGAADGLPSPPV--LTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 203
            LP+  PW P P   A+   P P    L+ESCG K  +G  GGA  G   G+FLGAM DM P + ++NG+EVPQAPL+EQ R   + T E+ +   RNFA  + +F G+EC++EK RGK D+ NS   GC TGAA   KQGP AA  GC G A FS  +D +  H
Sbjct:   97 LPYLTPWYPIPGPNASAEGPPPDFSWLSESCGGKAAIGVFGGAVCGLFMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQMRTTVRATGEKCIYWSRNFAFITGVFGGTECLVEKYRGKHDVWNSALGGCVTGAALQAKQGPQAAAIGCGGFAVFSLVIDSVFPH 260          
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A448Z601_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z601_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.100e-39
Identity = 78/162 (48.15%), Postives = 104/162 (64.20%), Query Frame = 0
Query:   43 LPFFLPWVPKPAAGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 203
            LP+F+PW  K + G  +  P+   L + C  K  +G  GG  MG + G+FLGA+ D QP +Q+  G++VPQAP +EQAR   + TAE+S+   RNFA  + +F GSEC++EK RGK DM N V +GC TGAA     GP AA  GC G AAFS  +DK+MG+
Sbjct:  111 LPYFMPW--KTSGGPTEIPPNYAWLMDGCAGKAAIGVFGGGVMGLLMGVFLGALSDSQPPIQVAGGKDVPQAPFKEQARYTMRATAEKSMYWCRNFAFITGVFGGSECLVEKFRGKHDMWNPVVSGCITGAALQAHAGPQAAAVGCGGFAAFSIVIDKIMGN 270          
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: K0TBX0_THAOC (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBX0_THAOC)

HSP 1 Score: 142 bits (359), Expect = 8.430e-39
Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 0
Query:   43 LPFFLPWVPKPAAGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMG 202
            LP+  PW  +  A  A+  P+   L+ESCG K  +G +GG  MG V G+FLGA+ DM P + ++ G+EVPQAPL+EQ R   + TA++SL   R FA  + +F GSEC++EK RGK D+ NSV +GC TGAA   KQGP A+  GC G A FS  +D  MG
Sbjct:   84 LPYPQPWA-RANASPAELPPNFDWLSESCGSKAAIGVIGGGAMGLVMGVFLGALTDMTPPVTIIEGKEVPQAPLKEQMRTTLRATADKSLYWCRQFAFITGVFGGSECLVEKYRGKHDVWNSVVSGCITGAAMQAKQGPQASAAGCGGFAVFSLVIDSFMG 243          
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A7S3VGZ9_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGZ9_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.320e-38
Identity = 81/168 (48.21%), Postives = 105/168 (62.50%), Query Frame = 0
Query:   37 PNMGSRLPFFLPWVPKPAAGAADGLPSP-PVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMG 202
            P     + + +PW    A    D LP     L+ESC  K  +G +GG+  G V G+FLGAM DM P + ++NG+EVPQAPLREQ R   + T E+SL   RNFA  + +F G++C++EK RG  D+ NSV +GC TGAA   KQGP AA  GC G AAFS  +DK+MG
Sbjct:   71 PPQAQYMAYPVPWR---ATSGPDYLPPDFGWLSESCAGKTAIGVLGGSVCGLVMGVFLGAMSDMTPPVTIINGKEVPQAPLREQMRTTLRATGEKSLYWARNFAFITGVFGGTDCLVEKYRGTHDVWNSVISGCVTGAAMQAKQGPQAAAIGCGGFAAFSLVIDKVMG 235          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF19_9PHAE8.160e-11185.19Mitochondrial import inner membrane translocase su... [more]
A0A836C710_9STRA1.690e-6271.13Mitochondrial import inner membrane translocase su... [more]
A0A7S2P255_9STRA2.170e-4746.15Mitochondrial import inner membrane translocase su... [more]
A0A6U3RYY1_9STRA1.450e-4446.81Mitochondrial import inner membrane translocase su... [more]
A0A1Z5K7I7_FISSO4.740e-4251.23Mitochondrial import inner membrane translocase su... [more]
A0A7S1TYW7_9STRA9.980e-4248.77Mitochondrial import inner membrane translocase su... [more]
A0A7S2AAN4_TRICV2.750e-4048.17Mitochondrial import inner membrane translocase su... [more]
A0A448Z601_9STRA2.100e-3948.15Mitochondrial import inner membrane translocase su... [more]
K0TBX0_THAOC8.430e-3949.07Mitochondrial import inner membrane translocase su... [more]
A0A7S3VGZ9_9STRA1.320e-3848.21Mitochondrial import inner membrane translocase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 72..194
e-value: 9.2E-29
score: 100.1
NoneNo IPR availablePANTHERPTHR14110:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 68..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..95
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..74
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 96..203
NoneNo IPR availableTMHMMTMhelixcoord: 75..97
IPR039175Mitochondrial import inner membrane translocase subunit TIM22PANTHERPTHR14110MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 68..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig856contigL-elsbetiae_contig856:18723..20586 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig856.17593.1mRNA_L-elsbetiae_contig856.17593.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig856 18723..20586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig856.17593.1 ID=prot_L-elsbetiae_contig856.17593.1|Name=mRNA_L-elsbetiae_contig856.17593.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=204bp
CPSPLLCCCDPLVTMADEERRHDRSFVERPGSRSLPPNMGSRLPFFLPWV
PKPAAGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQ
PLQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECV
IEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKL
MGH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039175TIM22