mRNA_L-elsbetiae_contig856.17593.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A6H5KF19_9PHAE (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF19_9PHAE) HSP 1 Score: 323 bits (829), Expect = 8.160e-111 Identity = 161/189 (85.19%), Postives = 174/189 (92.06%), Query Frame = 1 Query: 49 DEERRHDRSFVER--PGSRSLPPNMGSRLPFFLPWVPKPAAGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQPLQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 609 D ERRHD ++ GSRSL P +GSRLPFFLPWVP+PAAGAAD +P+PPVLTESCGFKLIMGTVGGAGMGFVFG+FLGAMGDMQPLQM+NGREVPQAP REQAR+AYKQTA+RSLS+GRNFA+FSA+FMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGP AACFGCVGMA FSA MDKLMGH Sbjct: 4 DGERRHDECCKQQGTEGSRSLHPQLGSRLPFFLPWVPRPAAGAADAMPTPPVLTESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQPLQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 192
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A836C710_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C710_9STRA) HSP 1 Score: 201 bits (512), Expect = 1.690e-62 Identity = 101/142 (71.13%), Postives = 115/142 (80.99%), Query Frame = 1 Query: 184 PSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQPLQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 609 P PP L ESCG +LIMGT GG GMG +FG+FLGAMGDMQP+Q++NGREVPQAPL EQAR AY T RSL + +NFA+FSA+FM SECVIEKMRGK DMMNSVY GC TG AFG+K GP A GC+GMAAFSA +D +MGH Sbjct: 58 PQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 199
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A7S2P255_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P255_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.170e-47 Identity = 90/195 (46.15%), Postives = 119/195 (61.03%), Query Frame = 1 Query: 31 PLVTMADEERRHDRSFVERPGSRSLPPNMGS-RLPFFLPWVPKPAAGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 609 P +A ++R + L P + RLP+ +PW+P GA + P +TESCG K +G GGA MG + G+FLGAM DM P + ++NG+EVPQAPL+EQAR + T E+ + RNFA + +F GSEC++EK RGK D+ N V +GC TGAA KQGP AA GC G AAFS +D +MGH Sbjct: 27 PSTELAQSFYNNERVLQKPVPKEQLNPYFNTTRLPYLIPWMPT-FNGAQEPPPDFSFMTESCGIKSAIGLFGGAAMGLLMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQARTVMRATGEKCVYWSRNFAFITGVFAGSECLVEKARGKHDVWNQVLSGCVTGAAIQAKQGPQAAALGCGGFAAFSLVIDAVMGH 220
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A6U3RYY1_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RYY1_9STRA) HSP 1 Score: 158 bits (399), Expect = 1.450e-44 Identity = 88/188 (46.81%), Postives = 115/188 (61.17%), Query Frame = 1 Query: 46 ADEERRHDRSFVERPGSRSLPPNMGSRLPFFLPWVPKPAAGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMG 606 + + H R+ + SL LP+F PW KP +G P L+ESCG K +G GG MG + G+FLGAM DM P + ++ G+EVPQAPL+EQ R + TAE+S+ R FA + +F GSEC++EK RGKTD+ NSV +GC TGAA K GPS+A FGC G AAFS +D +MG Sbjct: 78 SSNSKLHQRAENDANKDMSLSTLTSKSLPYFQPW--KPTSGPEQLPPDFTFLSESCGGKAAIGVFGGGVMGLLMGVFLGAMSDMTPPVTVIGGKEVPQAPLKEQMRTTMRATAEKSMYWCRQFAFITGVFSGSECLVEKYRGKTDVWNSVLSGCVTGAAMQAKAGPSSAAFGCGGFAAFSLVIDSVMG 263
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A1Z5K7I7_FISSO (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7I7_FISSO) HSP 1 Score: 151 bits (382), Expect = 4.740e-42 Identity = 83/162 (51.23%), Postives = 105/162 (64.81%), Query Frame = 1 Query: 127 LPFFLPWVPKPAAGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 609 LP+ LPW KP A + P LT SC K+ +G +GGAGMG + G+FLGA+ D P +Q++ GR+VPQAPLREQ RV + TAE+S NFA + +F GSEC++EK RGK D+ NSV +GC TGAA K GP +A GC G AAFS +D M H Sbjct: 104 LPYPLPW--KPVASPTEPPPDFSWLTGSCAGKVAIGVIGGAGMGALMGLFLGALSDTTPPVQVIGGRDVPQAPLREQMRVVMRATAEKSRYWAGNFAFITGVFAGSECLVEKYRGKNDLWNSVASGCITGAAMQAKAGPQSAALGCGGFAAFSLVIDSFMHH 263
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A7S1TYW7_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYW7_9STRA) HSP 1 Score: 148 bits (374), Expect = 9.980e-42 Identity = 79/162 (48.77%), Postives = 100/162 (61.73%), Query Frame = 1 Query: 127 LPFFLPWVPKPAAGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 609 +P F P P P +P ESC + ++G+ G MG V G+FLGAMGD+ P + V G+E PQ PL EQAR AY+ TAERS+ R+F +A+F G+ECVIEK RG+ D N V +GCA GA GP+AAC GC G AAFSAA + +MGH Sbjct: 37 VPIFTPATPHPGV-------NPGWAAESCVGRAVLGSFAGGAMGLVLGVFLGAMGDLNPPIYFVKGKEAPQPPLAEQARTAYRTTAERSIGFARSFFALTALFSGTECVIEKFRGRHDGWNPVLSGCAAGAMMSASGGPTAACMGCAGFAAFSAAAEAVMGH 191
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A7S2AAN4_TRICV (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAN4_TRICV) HSP 1 Score: 147 bits (370), Expect = 2.750e-40 Identity = 79/164 (48.17%), Postives = 100/164 (60.98%), Query Frame = 1 Query: 127 LPFFLPWVPKPAAGAADGLPSPPV--LTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 609 LP+ PW P P A+ P P L+ESCG K +G GGA G G+FLGAM DM P + ++NG+EVPQAPL+EQ R + T E+ + RNFA + +F G+EC++EK RGK D+ NS GC TGAA KQGP AA GC G A FS +D + H Sbjct: 97 LPYLTPWYPIPGPNASAEGPPPDFSWLSESCGGKAAIGVFGGAVCGLFMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQMRTTVRATGEKCIYWSRNFAFITGVFGGTECLVEKYRGKHDVWNSALGGCVTGAALQAKQGPQAAAIGCGGFAVFSLVIDSVFPH 260
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A448Z601_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z601_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.100e-39 Identity = 78/162 (48.15%), Postives = 104/162 (64.20%), Query Frame = 1 Query: 127 LPFFLPWVPKPAAGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 609 LP+F+PW K + G + P+ L + C K +G GG MG + G+FLGA+ D QP +Q+ G++VPQAP +EQAR + TAE+S+ RNFA + +F GSEC++EK RGK DM N V +GC TGAA GP AA GC G AAFS +DK+MG+ Sbjct: 111 LPYFMPW--KTSGGPTEIPPNYAWLMDGCAGKAAIGVFGGGVMGLLMGVFLGALSDSQPPIQVAGGKDVPQAPFKEQARYTMRATAEKSMYWCRNFAFITGVFGGSECLVEKFRGKHDMWNPVVSGCITGAALQAHAGPQAAAVGCGGFAAFSIVIDKIMGN 270
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: K0TBX0_THAOC (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBX0_THAOC) HSP 1 Score: 142 bits (359), Expect = 8.430e-39 Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 1 Query: 127 LPFFLPWVPKPAAGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMG 606 LP+ PW + A A+ P+ L+ESCG K +G +GG MG V G+FLGA+ DM P + ++ G+EVPQAPL+EQ R + TA++SL R FA + +F GSEC++EK RGK D+ NSV +GC TGAA KQGP A+ GC G A FS +D MG Sbjct: 84 LPYPQPWA-RANASPAELPPNFDWLSESCGSKAAIGVIGGGAMGLVMGVFLGALTDMTPPVTIIEGKEVPQAPLKEQMRTTLRATADKSLYWCRQFAFITGVFGGSECLVEKYRGKHDVWNSVVSGCITGAAMQAKQGPQASAAGCGGFAVFSLVIDSFMG 243
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Match: A0A7S3VGZ9_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGZ9_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.320e-38 Identity = 81/168 (48.21%), Postives = 105/168 (62.50%), Query Frame = 1 Query: 109 PNMGSRLPFFLPWVPKPAAGAADGLPSP-PVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARVAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMG 606 P + + +PW A D LP L+ESC K +G +GG+ G V G+FLGAM DM P + ++NG+EVPQAPLREQ R + T E+SL RNFA + +F G++C++EK RG D+ NSV +GC TGAA KQGP AA GC G AAFS +DK+MG Sbjct: 71 PPQAQYMAYPVPWR---ATSGPDYLPPDFGWLSESCAGKTAIGVLGGSVCGLVMGVFLGAMSDMTPPVTIINGKEVPQAPLREQMRTTLRATGEKSLYWARNFAFITGVFGGTDCLVEKYRGTHDVWNSVISGCVTGAAMQAKQGPQAAAIGCGGFAAFSLVIDKVMG 235 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig856.17593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig856.17593.1 >prot_L-elsbetiae_contig856.17593.1 ID=prot_L-elsbetiae_contig856.17593.1|Name=mRNA_L-elsbetiae_contig856.17593.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=204bp CPSPLLCCCDPLVTMADEERRHDRSFVERPGSRSLPPNMGSRLPFFLPWVback to top mRNA from alignment at L-elsbetiae_contig856:18723..20586- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig856.17593.1 ID=mRNA_L-elsbetiae_contig856.17593.1|Name=mRNA_L-elsbetiae_contig856.17593.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1864bp|location=Sequence derived from alignment at L-elsbetiae_contig856:18723..20586- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig856:18723..20586- >mRNA_L-elsbetiae_contig856.17593.1 ID=mRNA_L-elsbetiae_contig856.17593.1|Name=mRNA_L-elsbetiae_contig856.17593.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1224bp|location=Sequence derived from alignment at L-elsbetiae_contig856:18723..20586- (Laminarionema elsbetiae ELsaHSoW15)back to top |