prot_L-elsbetiae_contig852.17553.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig852.17553.1
Unique Nameprot_L-elsbetiae_contig852.17553.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length730
Homology
BLAST of mRNA_L-elsbetiae_contig852.17553.1 vs. uniprot
Match: A0A6H5KN23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN23_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 1.320e-110
Identity = 379/783 (48.40%), Postives = 424/783 (54.15%), Query Frame = 0
Query:   19 QVLYGDYNGHLRPLNLMYFSLDSRCLVADHPESVAEEVESHFCPKCNGLFTTPDAISTENRCPLCYECPCCGSVLAPSLVSLEEAATPSPSLRAAGRPSFCLQCLYCQWTSEDSGVVAPDPVALA--------------------------EAAAATARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---------------RRVGSVGGSGXXXXXXXXXXXXXXXXXXXXXXSAAGPWKVADLEEAVALRNEAVAAASRSPXXXXXXXXXXXXXXIAQKTKDA--PGTAPPLWTRRADTAGPDPALWALASGHEVFGLAERVESPSLSPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGWCPRRVRLRTRLGKRCRKDLGAGRT------GILIKATFNPLEGDSSTAKASKHCCLCTRTKGVKKKWFKKDCSAALLVPRVTVAALPSYVALIGPAAAVATATATANDGEEAPSSGTAXXXXXXXXXXXXXXXXXXXXX--RLANPQQDTLLRLRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-------------AAAPSV---------VTVRPEGWKEGDLLRLEGKEDEVLRQPGERHRLPVGALLVPGTGGXXXXXXXXXXXXXXXXXXXXXXXXAEAAAPFLVHQQGEVAWVRVPLDRASVDRIAAAAGGXXXXTGAVSASARASLLVDVRFSLVMQEGEEGGGAEARGSSDDVSMPISVRFPLARCP 728
            +VLYGDYNG+LRPL+LMYFSLDSRCLVADHP SV EEVESHFCP C   F TPDA+STENRCP C+ECPCC  VL PS VSL+ +A+   S  +AG  S+CL+CLYCQWTSEDSG+VA DP  LA                          EAA     XXXXXXXXXXXXXXX          XXXXXXXXXXXXXXX V                R    G +                       +   P KV+DL  AVA R + VAAASRS               + Q    A  P    P W  R DT GPDPALW L+SGHE  GLAERVE    SP                  XXXXXXXXXXXXXXXX    PRRVRLR RLGKRCRKDL  G         +  K+   P+        A KH     R +G+KK  FKKDCSAAL VPR+TVA+LPS +AL+GP                       XXXXXXXXXXXXXXXXXX     RLANPQ  TLLRLRVA                           XXXXXXXXXXXXXXXXXXXXXXXXX              AAAP++         VTVRP GW E D + LEG+EDE++RQPG+R+RLP G L     GG                           A PFL+HQQG+VAWVRVPLD+A  DR+AAAA  XXXX         A  ++DVRFSLVM EG+ GGG       DD+SMPI+VRFPL+ CP
Sbjct:    3 EVLYGDYNGYLRPLSLMYFSLDSRCLVADHPRSVQEEVESHFCPHCTSFFRTPDAVSTENRCPHCFECPCCRCVLVPSPVSLDRSAS---SFSSAGT-SYCLRCLYCQWTSEDSGLVAQDPAGLAAXXXXXXXXXXXXXXXXXXXXXGALLEAAQQXXXXXXXXXXXXXXXXXXSRGRDRGRAAXXXXXXXXXXXXXXXDVDSSLFSSAASISSHTTRAVFAGCAVQVVRTLLAFGTCLQLPSFFFLLTPPLPLKVSDLNNAVARRTQVVAAASRS-------------VALPQPPAAAGTPAAVSPPWALRGDTDGPDPALWTLSSGHETAGLAERVEGSWSSPP----RQSPPARGARGDGXXXXXXXXXXXXXXXXXXXVPRRVRLRARLGKRCRKDLALGLCLPPPPPALSSKSALGPI--------AHKHTRRTNRQEGIKKTRFKKDCSAALSVPRITVASLPSSLALLGPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLVLRLANPQI-TLLRLRVATEHGPSTAESDLDGNIAAAAAATVGVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGVTAAAAPALGAGGGNAGFVTVRPAGWGEDDWVHLEGREDEIIRQPGDRYRLPRGLLSRADDGGGGYTGSLPGAERSGRA----------GATPFLLHQQGDVAWVRVPLDKACADRVAAAAKAXXXX---------ALPVLDVRFSLVMGEGDGGGG-------DDISMPIAVRFPLSSCP 729          
BLAST of mRNA_L-elsbetiae_contig852.17553.1 vs. uniprot
Match: D7FRF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF1_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 7.920e-97
Identity = 353/757 (46.63%), Postives = 388/757 (51.25%), Query Frame = 0
Query:   19 QVLYGDYNGHLRPLNLMYFSLDSRCLVADHPESVAEEVESHFCPKCNGLFTTPDAISTENRCPLCYECPCCGSVLAPSLVSLEEAATPSPSLRAAGRPSFCLQCLYCQWTSEDSGVVAPDPVALAEAAAATARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRRVGSVGGSGXXXXXXXXXXXXXXXXXXXXXXSAAGPW----------------KVADLEEAVALRNEAVAAASRSPXXXXXXXXXXXXXXIAQKTKDAPGTAPPLWTRRADTAGPDPALWALASGHEVFGLAERVESPSLSPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGWCPRRVRLRTRLGKRCRKDLGAGRTGILIKATFNPLEGDSSTAKASKHCCLCTRTKGVKKKWFKKDCSAALLVPRVTVAALPSYVALIGPAAAVATATATANDGEEAPSSGTAXXXXXXXXXXXXXXXXXXXXX------RLANPQQDTLLRLRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAA-------------------------PSVVTVRPEGWKEGDLLRLEGKEDEVLRQPGERHRLPVGALLVPGTGGXXXXXXXXXXXXXXXXXXXXXXXXAEAAAPFLVHQQGEVAWVRVPLDRASVDRIAAAAGGXXXXTGAVSASARASLLVDVRFSLVMQEGEEGGGAEARGSSDDVSMPISVRFPLARCP 728
            +VLYGDYNG+LRPL+LMYFSLDSRCLVADHP SV EEVESHFCP C   F TPDA+S EN  P                     A T + S R                      +  P P+     A AT                                            RRV       XXXXXXXXX             +AA  W                 V+DL+EAVA R + V AASRS                   T  A   +PP W  R DT GPDPALW L+SGHE  GLAERVE P  SP               XXXXXXXXXXXXXXXXXXX    PRRVRLR R+GKRCRKDL AGRTGILIKATFNPL+GDSSTAK           +GVKK WFKKDCSAAL VPR+TVA+LPS +AL+GP A                     XXXXXXXXXXXXXXXXXXXXX      RLANPQ  TLLRLRVA                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                             P  VTVRP GW EGD + LEG+EDE++RQPG+R+RLP G L     GG                           A PFL+HQQG+VAWVRVP D+A  DR+AAA          V A+A   +L DVRFSLVM EGE G G       DD+SMPI+VRFPL+ CP
Sbjct:    3 EVLYGDYNGYLRPLSLMYFSLDSRCLVADHPRSVQEEVESHFCPHCTSFFRTPDAMSAENSGP---------------------ARTRASSHRT------------------QRALAPPRPLERRRVAVATGAARRWSSALCSRRPSKGKRRPPSERGR----------------RRVEGAXXXXXXXXXXXXXVPGFAPGARTAVAAAAAKWIRRCSLRRRVRPGPGRHVSDLDEAVARRAQVVVAASRSVALPRPPAA----------TAAAAAVSPP-WALREDTTGPDPALWTLSSGHETAGLAERVEGPWSSPP----RQSPPARGARXXXXXXXXXXXXXXXXXXXXXXVPRRVRLRARVGKRCRKDLAAGRTGILIKATFNPLDGDSSTAK-----------EGVKKTWFKKDCSAALSVPRITVASLPSSLALLGPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLVLRLANPQI-TLLRLRVATENGPSSAESDPAGNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNPGFVTVRPAGWGEGDWVHLEGREDEIIRQPGDRYRLPRGLLSRADDGGGGDTGSPPGAERSGRA----------GATPFLLHQQGDVAWVRVPFDKACADRVAAA----------VKAAAALPVL-DVRFSLVMGEGEGGSG-------DDISMPIAVRFPLSSCP 649          
BLAST of mRNA_L-elsbetiae_contig852.17553.1 vs. uniprot
Match: A0A7S4DCB8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCB8_HETAK)

HSP 1 Score: 60.5 bits (145), Expect = 2.240e-7
Identity = 34/81 (41.98%), Postives = 49/81 (60.49%), Query Frame = 0
Query:  359 PRRVRLRTRLGKRCRKDLGAGRTGILIKATFNPLEGDSSTAKASKHCCLCTRTKGVKKKWFKKDCSAALLVPRVTVAALPS 439
            P R+ L  +  +RCR+D+  G++GILIK + NP+EGDSS              +G   KW+KKD SA   VP++T+ +LPS
Sbjct:   13 PHRLPLLGKRARRCRRDVEDGKSGILIKPSVNPMEGDSSQPS----------NRG---KWWKKDASAIHFVPQITIVSLPS 80          
BLAST of mRNA_L-elsbetiae_contig852.17553.1 vs. uniprot
Match: A0A7S2EC45_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EC45_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 4.570e-6
Identity = 34/73 (46.58%), Postives = 41/73 (56.16%), Query Frame = 0
Query:  362 VRLRTRLGKRCRKDLGAGRTGILIKATFNPLEGDSSTAKASKHCCLCTRTKGVKKKWFKKDCSAALLVPRVTV 434
            ++LR R  +RCR +L AGRTGIL+K   NPLEGDSS                    W+KKD SA  +VPRV V
Sbjct:  127 IQLRPRKSRRCRAELAAGRTGILVKPKLNPLEGDSSLRSGHGQ-------------WYKKDSSAIHVVPRVQV 186          
BLAST of mRNA_L-elsbetiae_contig852.17553.1 vs. uniprot
Match: K0SN59_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SN59_THAOC)

HSP 1 Score: 60.8 bits (146), Expect = 6.350e-6
Identity = 34/73 (46.58%), Postives = 40/73 (54.79%), Query Frame = 0
Query:  362 VRLRTRLGKRCRKDLGAGRTGILIKATFNPLEGDSSTAKASKHCCLCTRTKGVKKKWFKKDCSAALLVPRVTV 434
            V  R R+ +RCR +L AGRTGIL+K   NPLEGDSS                    WFKKD SA  +VPRV +
Sbjct:  279 VPYRARVSRRCRAELAAGRTGILVKPKLNPLEGDSSLRTGHGQ-------------WFKKDSSATQVVPRVQI 338          
BLAST of mRNA_L-elsbetiae_contig852.17553.1 vs. uniprot
Match: A0A6V2CU51_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2CU51_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 6.840e-6
Identity = 34/73 (46.58%), Postives = 41/73 (56.16%), Query Frame = 0
Query:  362 VRLRTRLGKRCRKDLGAGRTGILIKATFNPLEGDSSTAKASKHCCLCTRTKGVKKKWFKKDCSAALLVPRVTV 434
            ++LR R  +RCR +L AGRTGIL+K   NPLEGDSS                    W+KKD SA  +VPRV V
Sbjct:  304 IQLRPRKSRRCRAELAAGRTGILVKPKLNPLEGDSSLRSGHGQ-------------WYKKDSSAIHVVPRVQV 363          
BLAST of mRNA_L-elsbetiae_contig852.17553.1 vs. uniprot
Match: A0A3M7DLL0_HORWE (Uncharacterized protein n=1 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7DLL0_HORWE)

HSP 1 Score: 60.5 bits (145), Expect = 8.690e-6
Identity = 44/136 (32.35%), Postives = 60/136 (44.12%), Query Frame = 0
Query:   25 YNGHLRPLNLMYFSLDSRCLVADH------PESVAEEVESHFCPKCNGLFTTPDAI--STENRCPL-CYECPCCGSVLAPSLVSLEEAATPS-------PSLRAAGRPSFCLQCLYCQWTSEDSGVVAPDPVALAE 144
            +N H    N   + LD + L  D       P+ V+EEV + +CP C  LF  P +      NRC   CY+CP C + LA + V                P   A G   + LQCLYC W++ D G+V   P  + E
Sbjct:   19 FNPHSPRANYALYPLD-QLLYCDECDGIRCPKCVSEEVVNWYCPSC--LFEVPSSAVRGDGNRCARNCYQCPECTASLAVTAVPHASRGDDGDGGKYLKPDAGAKGEERYLLQCLYCDWSTLDVGLVFHRPTKMTE 151          
BLAST of mRNA_L-elsbetiae_contig852.17553.1 vs. uniprot
Match: A0A7S2R1C9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R1C9_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.530e-5
Identity = 35/75 (46.67%), Postives = 42/75 (56.00%), Query Frame = 0
Query:  359 PRRVRLRTRLGKRCRKDLGAGRTGILIKATFNPLEGDSSTAKASKHCCLCTRTKGVKKKWFKKDCSAALLVPRVT 433
            P  + L TR  +RCRK+L AGRTGIL+K   NPLEGDSS                    W+KKD SA  +VP+VT
Sbjct:   20 PYPIPLHTRKIRRCRKELAAGRTGILMKPKPNPLEGDSSLRSGHDQ-------------WWKKDSSAIHVVPKVT 81          
BLAST of mRNA_L-elsbetiae_contig852.17553.1 vs. uniprot
Match: A0A7S4VG30_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VG30_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.260e-5
Identity = 40/126 (31.75%), Postives = 57/126 (45.24%), Query Frame = 0
Query:   18 TQVLYGDYNGHLRPLNLMYFSLDSRCLVAD----HPESVAEEVESHFCPKCNGLFTTPDAI--STENRCP--LCYECPCCGSVLAPSLVSLEEAATPSPSLRAAGRPSFCLQCLYCQWTSEDSGVV 135
            T VLY D+ GH  PL+  Y +  SR L +      P S   E++S +CP+C        A   S +  CP   C  CP C +VL   ++     +    +    G  S    C YC+WTSE+  V+
Sbjct:    8 TSVLYIDHAGHPAPLSTAYHATASRLLSSSIDDRRPPSTLTEIDSAYCPQCLLFHDAAAAAGKSMKGNCPRATCRSCPVCAAVLT-VVMEPPRGSNDDDAQNLVGMYS----CSYCRWTSEECKVM 128          
BLAST of mRNA_L-elsbetiae_contig852.17553.1 vs. uniprot
Match: A0A7S2ECG0_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ECG0_TRICV)

HSP 1 Score: 57.0 bits (136), Expect = 2.350e-5
Identity = 34/76 (44.74%), Postives = 40/76 (52.63%), Query Frame = 0
Query:  359 PRRVRLRTRLGKRCRKDLGAGRTGILIKATFNPLEGDSSTAKASKHCCLCTRTKGVKKKWFKKDCSAALLVPRVTV 434
            P  + LR R  +RCR +L AGRTGIL+K   NPLEGDSS                    W+KKD SA   VP+V V
Sbjct:   91 PLPIPLRARKSRRCRAELAAGRTGILVKPKVNPLEGDSSLRSGHGQ-------------WWKKDSSAIHSVPKVQV 153          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig852.17553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KN23_9PHAE1.320e-11048.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRF1_ECTSI7.920e-9746.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4DCB8_HETAK2.240e-741.98Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2EC45_9STRA4.570e-646.58Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0SN59_THAOC6.350e-646.58Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A6V2CU51_9STRA6.840e-646.58Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A3M7DLL0_HORWE8.690e-632.35Uncharacterized protein n=1 Tax=Hortaea werneckii ... [more]
A0A7S2R1C9_9STRA1.530e-546.67Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S4VG30_9STRA2.260e-531.75Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2ECG0_TRICV2.350e-544.74Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008603Dynactin subunit 4PFAMPF05502Dynactin_p62coord: 46..134
e-value: 2.9E-11
score: 42.8
IPR008603Dynactin subunit 4PANTHERPTHR13034DYNACTIN P62 SUBUNITcoord: 15..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig852contigL-elsbetiae_contig852:16068..22458 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig852.17553.1mRNA_L-elsbetiae_contig852.17553.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig852 16068..22458 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig852.17553.1 ID=prot_L-elsbetiae_contig852.17553.1|Name=mRNA_L-elsbetiae_contig852.17553.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=730bp
STRSRLASGQASQGMEETQVLYGDYNGHLRPLNLMYFSLDSRCLVADHPE
SVAEEVESHFCPKCNGLFTTPDAISTENRCPLCYECPCCGSVLAPSLVSL
EEAATPSPSLRAAGRPSFCLQCLYCQWTSEDSGVVAPDPVALAEAAAATA
REKHGGRGGGGGGDAAIIDALLKAAKQREALAANARGGGGGAVRRVGSVG
GSGVSGAAGGTAASLFSAAASGAGGSAAGPWKVADLEEAVALRNEAVAAA
SRSPASPPASGGGGGGGGIAQKTKDAPGTAPPLWTRRADTAGPDPALWAL
ASGHEVFGLAERVESPSLSPSLSLPLSLSAPLTGRGAGESGGGGGGGAGA
GAGGAGWCPRRVRLRTRLGKRCRKDLGAGRTGILIKATFNPLEGDSSTAK
ASKHCCLCTRTKGVKKKWFKKDCSAALLVPRVTVAALPSYVALIGPAAAV
ATATATANDGEEAPSSGTAASGGAAAAAAQQRPPPPSLVLRLANPQQDTL
LRLRVARDDDPPPPGASAAESGAAGGGDGAAAGGGGGGGGGGGGGGAAAA
AAASAGAADAAAPSVVTVRPEGWKEGDLLRLEGKEDEVLRQPGERHRLPV
GALLVPGTGGGGGGGDVAVAAGDGGRPRGTASAAAEAAAPFLVHQQGEVA
WVRVPLDRASVDRIAAAAGGAAAGTGAVSASARASLLVDVRFSLVMQEGE
EGGGAEARGSSDDVSMPISVRFPLARCPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008603DCTN4