prot_L-elsbetiae_contig8516.17542.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8516.17542.1
Unique Nameprot_L-elsbetiae_contig8516.17542.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length131
Homology
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BLAST of mRNA_L-elsbetiae_contig8516.17542.1 vs. uniprot
Match: A0A6H5L074_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L074_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 5.060e-9
Identity = 51/119 (42.86%), Postives = 56/119 (47.06%), Query Frame = 0 
Query:    1 MDRSGTFRTDDAVASPHQLLDESRDYFAFDSSMKGSDYSLFAASRDFTHSLRFSTGGWDAKPYGCKPYSSGSDDEDXXXXXXXXXXXXXESCDGSEEFFPEPDPFDPADGGLPCLSRCP 119
            MD SGTF TD AV SP QL D S   FAF S   GS  S  A          +    +D    G   + S   D++                DGSEE FPEPDP D ADGGLPCLSR P
Sbjct:  391 MDISGTFGTDMAVTSPAQLFDRSGGDFAFISPSNGSSSSRRAPGSPSPRGPDWCLHDYDTATGG--GFRSRLVDQEDDGAWS----------DGSEEVFPEPDPSDLADGGLPCLSRRP 497
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BLAST of mRNA_L-elsbetiae_contig8516.17542.1 vs. uniprot
Match: D8LJL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL5_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 2.650e-8
Identity = 57/137 (41.61%), Postives = 63/137 (45.99%), Query Frame = 0 
Query:    1 MDRSGTFRTDDAVASPHQLLDESRDYFAF------DSSMKGSDYSLFAASRDFT-HSLRFSTGGWDAKPYGCKPYSSGSDDEDXXXXXXXXXXXXXESCDGSEEFFPEPDPFDPADGGLPCLSRCPREAWGPAVAGQ 130
            MD S TF TD AVASP QL D S    AF       SS + +  SL     D+  H    + GG      G +      DD+                 DGSEE FPEPDP D ADGGLPCLSR P   W  AVA Q
Sbjct:  203 MDMSSTFGTDMAVASPAQLFDRSGGDLAFVSPKHESSSGRRAPGSLAPRGPDWCLHEDDTAAGG------GFRSRLVDQDDDGAWS-------------DGSEEVFPEPDPSDLADGGLPCLSRRPLGDWT-AVAPQ 319
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8516.17542.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L074_9PHAE5.060e-942.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJL5_ECTSI2.650e-841.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8516contigL-elsbetiae_contig8516:693..2350 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8516.17542.1mRNA_L-elsbetiae_contig8516.17542.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8516 615..2533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8516.17542.1 ID=prot_L-elsbetiae_contig8516.17542.1|Name=mRNA_L-elsbetiae_contig8516.17542.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp
MDRSGTFRTDDAVASPHQLLDESRDYFAFDSSMKGSDYSLFAASRDFTHS
LRFSTGGWDAKPYGCKPYSSGSDDEDDEDDDEDEEYDDDESCDGSEEFFP
EPDPFDPADGGLPCLSRCPREAWGPAVAGQ*
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