prot_L-elsbetiae_contig8508.17537.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8508.17537.1
Unique Nameprot_L-elsbetiae_contig8508.17537.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length108
Homology
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: D8LIM6_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIM6_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 2.010e-58
Identity = 89/108 (82.41%), Postives = 99/108 (91.67%), Query Frame = 0
Query:    1 MGSMEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQAVYGGEMRLRDGLQLLQERPDDPEVLHAVGVGLAHRGIAALEYEASWGVWFEM 108
            MGS+EWFKEVGPLI+KTGETPPMEC+QNAGDL YVPANW+HMTLNIGESIGVGGQAVY GE RL+DGL+LLQ+RP DPE+LHA+GVGLAHRGI+ALEYE   GV  EM
Sbjct:    1 MGSLEWFKEVGPLIEKTGETPPMECIQNAGDLFYVPANWRHMTLNIGESIGVGGQAVYSGEARLQDGLELLQQRPGDPELLHAIGVGLAHRGISALEYEGE-GVKIEM 107          
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: A0A6H5K503_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K503_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 8.650e-54
Identity = 87/106 (82.08%), Postives = 97/106 (91.51%), Query Frame = 0
Query:    1 MGSMEWFKEVGPLIKKTGETPPMECMQ---NAGDLIYVPANWKHMTLNIGESIGVGGQAVYGGEMRLRDGLQLLQERPDDPEVLHAVGVGLAHRGIAALEYEASWG 103
            MGS+EWFKEVGPLI+KTGETPPMEC+Q   NAGDLIYVPANW+HMTLNIGESIGVGGQAVY GE RL+DGL+LLQ+RP DPE+LHA+GVGLAHRGI+ALEYE   G
Sbjct:  314 MGSLEWFKEVGPLIEKTGETPPMECIQAMCNAGDLIYVPANWRHMTLNIGESIGVGGQAVYSGEARLQDGLELLQQRPGDPELLHAIGVGLAHRGISALEYEGEGG 419          
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: A0A7S2RCI2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCI2_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.750e-20
Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = 0
Query:    3 SMEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQAVYGGEMRLRDGLQLLQERPDDPEVLHAVGVGLAHRGIA 94
            S +WF++V P +    ETP ++C+Q  G+++Y+PA WKH+TLNIGE IGVGGQA Y  + RLRD L  L++ PDD  +L   G GLA   +A
Sbjct:  120 SWDWFRQVLPKVPP--ETPLLQCVQRPGEVLYLPAGWKHLTLNIGEVIGVGGQAPYSTQARLRDALVGLRKNPDD--LLSLKGAGLAKAQMA 207          
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: A0A7S2RCS8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCS8_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.980e-20
Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = 0
Query:    3 SMEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQAVYGGEMRLRDGLQLLQERPDDPEVLHAVGVGLAHRGIA 94
            S +WF++V P +    ETP ++C+Q  G+++Y+PA WKH+TLNIGE IGVGGQA Y  + RLRD L  L++ PDD  +L   G GLA   +A
Sbjct:  120 SWDWFRQVLPKVPP--ETPLLQCVQRPGEVLYLPAGWKHLTLNIGEVIGVGGQAPYSTQARLRDALVGLRKNPDD--LLSLKGAGLAKAQMA 207          
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: A0A7S1KZW4_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1KZW4_ALECA)

HSP 1 Score: 67.0 bits (162), Expect = 1.450e-11
Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 0
Query:    3 SMEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQAVYGGEMRLRDGLQLLQERPDDPEVLHAVG 85
            S +WF+ V P +    +  P+ECMQ  G+++Y+P  W H+T+N GE+IG+G QAV+  +  + D L L      DPE    VG
Sbjct:    7 SRQWFERVYPTLP--ADLLPVECMQEPGEVMYLPGAWAHLTVNSGEAIGLGAQAVW--KQSVEDPLLLEAANQGDPEAQMLVG 85          
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: A0A482SJA5_9ARCH (JmjC domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJA5_9ARCH)

HSP 1 Score: 58.2 bits (139), Expect = 5.420e-8
Identity = 21/34 (61.76%), Postives = 29/34 (85.29%), Query Frame = 0
Query:   22 PMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQ 55
            P+ECMQ+ GD++Y+P  W HMT+NIGE+I +GGQ
Sbjct:  134 PLECMQHPGDILYLPPMWSHMTMNIGETIAIGGQ 167          
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: K1PPF3_CRAGI (JmjC domain-containing protein 8 n=4 Tax=Crassostrea gigas TaxID=29159 RepID=K1PPF3_CRAGI)

HSP 1 Score: 56.6 bits (135), Expect = 4.700e-7
Identity = 38/117 (32.48%), Postives = 60/117 (51.28%), Query Frame = 0
Query:    4 MEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQA---------VYGGEMRL--------RDGLQLLQER-----------PDDPEVLHAVGVGLAHRG 92
            MEW+ +V P +  T +  PMEC+Q AG+++Y+P    H T+N+G+++ +G Q          ++  E+ L        RD  +LLQER           PD+ EV+  +G  LA  G
Sbjct:  292 MEWYSKVYPSL--TEDHAPMECVQEAGEILYLPEGTYHGTINLGDTVAIGIQKKLAATETEKLFYKELNLERAAPGANRD--KLLQERIKIFKKLHKLLPDNTEVMMKLGQALADSG 404          
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: UPI0003F08594 (uncharacterized protein LOC102807379 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F08594)

HSP 1 Score: 55.1 bits (131), Expect = 1.630e-6
Identity = 23/53 (43.40%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    3 SMEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQ 55
            S++WF EV P ++  GE  P+EC+Q AG+++  P ++ H TLNIG+++ +G Q
Sbjct:  282 SLDWFNEVYPHLE--GEEKPIECIQEAGEILSQPESFYHSTLNIGDTVAIGIQ 332          
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: A0A1D1VFG1_RAMVA (JmjC domain-containing protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1VFG1_RAMVA)

HSP 1 Score: 54.7 bits (130), Expect = 2.240e-6
Identity = 21/50 (42.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    4 MEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVG 53
            M+WF  + P +  +G   PMEC+Q AG+++Y+PA W H +++IG+++ VG
Sbjct:  311 MDWFYRLYPNL--SGNQFPMECVQRAGEILYIPAFWYHASISIGDTVSVG 358          
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: UPI001B889F0D (uncharacterized protein LOC121367556 isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B889F0D)

HSP 1 Score: 54.7 bits (130), Expect = 2.240e-6
Identity = 22/52 (42.31%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    4 MEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQ 55
            ++WF +V P++ +T +  P+EC+Q AG++IY+P    H T+NIG+++ VG Q
Sbjct:  316 LDWFSKVYPVLSETQK--PVECVQQAGEIIYLPEGMYHGTINIGDTVAVGIQ 365          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIM6_ECTSI2.010e-5882.41TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K503_9PHAE8.650e-5482.08JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S2RCI2_9STRA1.750e-2050.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2RCS8_9STRA2.980e-2050.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1KZW4_ALECA1.450e-1139.76Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A482SJA5_9ARCH5.420e-861.76JmjC domain-containing protein n=1 Tax=archaeon Ta... [more]
K1PPF3_CRAGI4.700e-732.48JmjC domain-containing protein 8 n=4 Tax=Crassostr... [more]
UPI0003F085941.630e-643.40uncharacterized protein LOC102807379 n=1 Tax=Sacco... [more]
A0A1D1VFG1_RAMVA2.240e-642.00JmjC domain-containing protein n=1 Tax=Ramazzottiu... [more]
UPI001B889F0D2.240e-642.31uncharacterized protein LOC121367556 isoform X1 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003347JmjC domainPFAMPF02373JmjCcoord: 12..52
e-value: 1.5E-5
score: 25.4
NoneNo IPR availableGENE3D2.60.120.650coord: 1..55
e-value: 1.5E-8
score: 36.3
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 19..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8508contigL-elsbetiae_contig8508:140..3219 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8508.17537.1mRNA_L-elsbetiae_contig8508.17537.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8508 140..3219 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8508.17537.1 ID=prot_L-elsbetiae_contig8508.17537.1|Name=mRNA_L-elsbetiae_contig8508.17537.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bp
MGSMEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESI
GVGGQAVYGGEMRLRDGLQLLQERPDDPEVLHAVGVGLAHRGIAALEYEA
SWGVWFEM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom