mRNA_L-elsbetiae_contig8508.17537.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: D8LIM6_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIM6_ECTSI) HSP 1 Score: 190 bits (483), Expect = 2.010e-58 Identity = 89/108 (82.41%), Postives = 99/108 (91.67%), Query Frame = 1 Query: 1 MGSMEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQAVYGGEMRLRDGLQLLQERPDDPEVLHAVGVGLAHRGIAALEYEASWGVWFEM 324 MGS+EWFKEVGPLI+KTGETPPMEC+QNAGDL YVPANW+HMTLNIGESIGVGGQAVY GE RL+DGL+LLQ+RP DPE+LHA+GVGLAHRGI+ALEYE GV EM Sbjct: 1 MGSLEWFKEVGPLIEKTGETPPMECIQNAGDLFYVPANWRHMTLNIGESIGVGGQAVYSGEARLQDGLELLQQRPGDPELLHAIGVGLAHRGISALEYEGE-GVKIEM 107
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: A0A6H5K503_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K503_9PHAE) HSP 1 Score: 186 bits (472), Expect = 8.650e-54 Identity = 87/106 (82.08%), Postives = 97/106 (91.51%), Query Frame = 1 Query: 1 MGSMEWFKEVGPLIKKTGETPPMECMQ---NAGDLIYVPANWKHMTLNIGESIGVGGQAVYGGEMRLRDGLQLLQERPDDPEVLHAVGVGLAHRGIAALEYEASWG 309 MGS+EWFKEVGPLI+KTGETPPMEC+Q NAGDLIYVPANW+HMTLNIGESIGVGGQAVY GE RL+DGL+LLQ+RP DPE+LHA+GVGLAHRGI+ALEYE G Sbjct: 314 MGSLEWFKEVGPLIEKTGETPPMECIQAMCNAGDLIYVPANWRHMTLNIGESIGVGGQAVYSGEARLQDGLELLQQRPGDPELLHAIGVGLAHRGISALEYEGEGG 419
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: A0A7S2RCI2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCI2_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.750e-20 Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 7 SMEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQAVYGGEMRLRDGLQLLQERPDDPEVLHAVGVGLAHRGIA 282 S +WF++V P + ETP ++C+Q G+++Y+PA WKH+TLNIGE IGVGGQA Y + RLRD L L++ PDD +L G GLA +A Sbjct: 120 SWDWFRQVLPKVPP--ETPLLQCVQRPGEVLYLPAGWKHLTLNIGEVIGVGGQAPYSTQARLRDALVGLRKNPDD--LLSLKGAGLAKAQMA 207
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: A0A7S2RCS8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCS8_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 2.980e-20 Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 7 SMEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQAVYGGEMRLRDGLQLLQERPDDPEVLHAVGVGLAHRGIA 282 S +WF++V P + ETP ++C+Q G+++Y+PA WKH+TLNIGE IGVGGQA Y + RLRD L L++ PDD +L G GLA +A Sbjct: 120 SWDWFRQVLPKVPP--ETPLLQCVQRPGEVLYLPAGWKHLTLNIGEVIGVGGQAPYSTQARLRDALVGLRKNPDD--LLSLKGAGLAKAQMA 207
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: A0A7S1KZW4_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1KZW4_ALECA) HSP 1 Score: 67.0 bits (162), Expect = 1.450e-11 Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 1 Query: 7 SMEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQAVYGGEMRLRDGLQLLQERPDDPEVLHAVG 255 S +WF+ V P + + P+ECMQ G+++Y+P W H+T+N GE+IG+G QAV+ + + D L L DPE VG Sbjct: 7 SRQWFERVYPTLP--ADLLPVECMQEPGEVMYLPGAWAHLTVNSGEAIGLGAQAVW--KQSVEDPLLLEAANQGDPEAQMLVG 85
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: A0A482SJA5_9ARCH (JmjC domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJA5_9ARCH) HSP 1 Score: 58.2 bits (139), Expect = 5.420e-8 Identity = 21/34 (61.76%), Postives = 29/34 (85.29%), Query Frame = 1 Query: 64 PMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQ 165 P+ECMQ+ GD++Y+P W HMT+NIGE+I +GGQ Sbjct: 134 PLECMQHPGDILYLPPMWSHMTMNIGETIAIGGQ 167
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: K1PPF3_CRAGI (JmjC domain-containing protein 8 n=4 Tax=Crassostrea gigas TaxID=29159 RepID=K1PPF3_CRAGI) HSP 1 Score: 56.6 bits (135), Expect = 4.700e-7 Identity = 38/117 (32.48%), Postives = 60/117 (51.28%), Query Frame = 1 Query: 10 MEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQA---------VYGGEMRL--------RDGLQLLQER-----------PDDPEVLHAVGVGLAHRG 276 MEW+ +V P + T + PMEC+Q AG+++Y+P H T+N+G+++ +G Q ++ E+ L RD +LLQER PD+ EV+ +G LA G Sbjct: 292 MEWYSKVYPSL--TEDHAPMECVQEAGEILYLPEGTYHGTINLGDTVAIGIQKKLAATETEKLFYKELNLERAAPGANRD--KLLQERIKIFKKLHKLLPDNTEVMMKLGQALADSG 404
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: UPI0003F08594 (uncharacterized protein LOC102807379 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F08594) HSP 1 Score: 55.1 bits (131), Expect = 1.630e-6 Identity = 23/53 (43.40%), Postives = 38/53 (71.70%), Query Frame = 1 Query: 7 SMEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQ 165 S++WF EV P ++ GE P+EC+Q AG+++ P ++ H TLNIG+++ +G Q Sbjct: 282 SLDWFNEVYPHLE--GEEKPIECIQEAGEILSQPESFYHSTLNIGDTVAIGIQ 332
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: A0A1D1VFG1_RAMVA (JmjC domain-containing protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1VFG1_RAMVA) HSP 1 Score: 54.7 bits (130), Expect = 2.240e-6 Identity = 21/50 (42.00%), Postives = 36/50 (72.00%), Query Frame = 1 Query: 10 MEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVG 159 M+WF + P + +G PMEC+Q AG+++Y+PA W H +++IG+++ VG Sbjct: 311 MDWFYRLYPNL--SGNQFPMECVQRAGEILYIPAFWYHASISIGDTVSVG 358
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Match: UPI001B889F0D (uncharacterized protein LOC121367556 isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B889F0D) HSP 1 Score: 54.7 bits (130), Expect = 2.240e-6 Identity = 22/52 (42.31%), Postives = 38/52 (73.08%), Query Frame = 1 Query: 10 MEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIGVGGQ 165 ++WF +V P++ +T + P+EC+Q AG++IY+P H T+NIG+++ VG Q Sbjct: 316 LDWFSKVYPVLSETQK--PVECVQQAGEIIYLPEGMYHGTINIGDTVAVGIQ 365 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8508.17537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8508.17537.1 >prot_L-elsbetiae_contig8508.17537.1 ID=prot_L-elsbetiae_contig8508.17537.1|Name=mRNA_L-elsbetiae_contig8508.17537.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bp MGSMEWFKEVGPLIKKTGETPPMECMQNAGDLIYVPANWKHMTLNIGESIback to top mRNA from alignment at L-elsbetiae_contig8508:140..3219- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8508.17537.1 ID=mRNA_L-elsbetiae_contig8508.17537.1|Name=mRNA_L-elsbetiae_contig8508.17537.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3080bp|location=Sequence derived from alignment at L-elsbetiae_contig8508:140..3219- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8508:140..3219- >mRNA_L-elsbetiae_contig8508.17537.1 ID=mRNA_L-elsbetiae_contig8508.17537.1|Name=mRNA_L-elsbetiae_contig8508.17537.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=648bp|location=Sequence derived from alignment at L-elsbetiae_contig8508:140..3219- (Laminarionema elsbetiae ELsaHSoW15)back to top |