prot_L-elsbetiae_contig8504.17533.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8504.17533.1
Unique Nameprot_L-elsbetiae_contig8504.17533.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length240
Homology
BLAST of mRNA_L-elsbetiae_contig8504.17533.1 vs. uniprot
Match: D8LKH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH2_ECTSI)

HSP 1 Score: 326 bits (835), Expect = 9.170e-107
Identity = 180/226 (79.65%), Postives = 191/226 (84.51%), Query Frame = 0
Query:    1 MSWAEPADMDTLSDLPPVS-VPVGGKVSNLSRGSSS--KQQKTSRRVGGASKSERRLLMEAKAGVGAAIAEDRQERLLAKRRTRKCVRCLYYANKVVGVAACVFTSGLNLALVYMGPDFRLHNRLVRSYLVSFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDPAHSRGTVWFYLELASFVALQAMAVMAVVLNVCLREVLERSGALGKRRGKRSA 223
            MSWAEPADMDTLS+LP  S V   G+   LSR +SS  +  K+    GGASKSERRLLMEAKAGVGAAIAEDRQERL+AKRR R+ VR LYYA KVVGVAACV+TSGLN  LVYM PDF L +RLVRSYLV FGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFD + SRGTVWF LELASFVALQ M  MAVVLNVCLREVLERSGA GKRRGK+SA
Sbjct:    1 MSWAEPADMDTLSELPRQSMVGSSGRPPKLSRTTSSVGRSAKSRGGSGGASKSERRLLMEAKAGVGAAIAEDRQERLIAKRRARRIVRVLYYAMKVVGVAACVYTSGLNATLVYMRPDFGLQDRLVRSYLVLFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDASLSRGTVWFPLELASFVALQTMGAMAVVLNVCLREVLERSGAFGKRRGKKSA 226          
BLAST of mRNA_L-elsbetiae_contig8504.17533.1 vs. uniprot
Match: A0A6H5JH79_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH79_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 3.290e-79
Identity = 128/159 (80.50%), Postives = 135/159 (84.91%), Query Frame = 0
Query:   69 DRQERLLAKRRTRKCVRCLYYANKVVGVAACVFTSGLNLALVYMGPDFRLH----NRLVRSYLVSFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDPAHSRGTVWFYLELASFVALQAMAVMAVVLNVCLREVLERSGALGKRRGKRSA 223
            DRQERL AKRR R+ VR LYYA KVVGV AC +TSGLN  LVYM PDF       + LVRSYLV FGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFD + SRGTVWF LELASFVALQ + VMA+VLNVCLREVLERSGALGKRRGK+SA
Sbjct:    8 DRQERLAAKRRARRIVRVLYYAMKVVGVGACFYTSGLNATLVYMRPDFGRELLASSLLVRSYLVLFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDASLSRGTVWFSLELASFVALQTVGVMALVLNVCLREVLERSGALGKRRGKKSA 166          
BLAST of mRNA_L-elsbetiae_contig8504.17533.1 vs. uniprot
Match: A0A835YSD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD9_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 4.920e-19
Identity = 64/161 (39.75%), Postives = 88/161 (54.66%), Query Frame = 0
Query:   62 VGAAIAEDRQERLLAKRRTRKCVRCLYYANKVVGVAACVFTSGLNLALVYMGPDFRLHNRLVRSYLVSFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAW--LCFDPAHSRGTVWFYLELASFVALQAMAVMAVVLNVCLREVLERSGALGKRRGK 220
            V  A+ E  +E  +A+RR R CV   Y+  K   VA  V     N+ ++    +  L  R VR YL+ F +  +LAELDT FA+ NFRALQKWW KA FYVF+    L + P  + G     L+LA+   L A+A+  V L  CLR +LE++     R+ K
Sbjct:   70 VRKAMEEVAREAAIARRRARACVTYSYWVLKSTAVATHVLMITTNVWVLARRHEPDLRERAVRGYLIPFSLAALLAELDTRFARDNFRALQKWWCKALFYVFLGTVNLGWTPLGALGRPLTRLQLATAGVLCALALGNVALYTCLRRLLEKTVLRKLRKAK 230          
BLAST of mRNA_L-elsbetiae_contig8504.17533.1 vs. uniprot
Match: A0A6H5JBH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH1_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 3.850e-12
Identity = 48/71 (67.61%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    1 MSWAEPADMDTLSDLPPVS-VPVGGKVSNLSRGSSSKQQKTSRRVG--GASKSERRLLMEAKAGVGAAIAE 68
            MSWAEPADMDTLS+LP  S V   G+   LSR +SS  +    R G  GASKSERRLLMEAKAGVGAAIAE
Sbjct:    1 MSWAEPADMDTLSELPRQSMVGSSGRPPKLSRTASSVGRSAKSRGGSRGASKSERRLLMEAKAGVGAAIAE 71          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8504.17533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LKH2_ECTSI9.170e-10779.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JH79_9PHAE3.290e-7980.50Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835YSD9_9STRA4.920e-1939.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JBH1_9PHAE3.850e-1267.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 173..177
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 205..240
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 112..122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..204
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 143..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..172
NoneNo IPR availableTMHMMTMhelixcoord: 87..109
NoneNo IPR availableTMHMMTMhelixcoord: 178..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8504contigL-elsbetiae_contig8504:1720..4950 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8504.17533.1mRNA_L-elsbetiae_contig8504.17533.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8504 1720..5205 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8504.17533.1 ID=prot_L-elsbetiae_contig8504.17533.1|Name=mRNA_L-elsbetiae_contig8504.17533.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=240bp
MSWAEPADMDTLSDLPPVSVPVGGKVSNLSRGSSSKQQKTSRRVGGASKS
ERRLLMEAKAGVGAAIAEDRQERLLAKRRTRKCVRCLYYANKVVGVAACV
FTSGLNLALVYMGPDFRLHNRLVRSYLVSFGVGGVLAELDTPFAKANFRA
LQKWWFKAPFYVFMAWLCFDPAHSRGTVWFYLELASFVALQAMAVMAVVL
NVCLREVLERSGALGKRRGKRSAASRRRRRGGAGSSASSR
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