prot_L-elsbetiae_contig8490.17509.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8490.17509.1
Unique Nameprot_L-elsbetiae_contig8490.17509.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length257
Homology
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BLAST of mRNA_L-elsbetiae_contig8490.17509.1 vs. uniprot
Match: D8LHS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS6_ECTSI)

HSP 1 Score: 309 bits (792), Expect = 1.060e-101
Identity = 197/266 (74.06%), Postives = 216/266 (81.20%), Query Frame = 0 
Query:    3 HSHGGD-TCSHQHSHGNTGPANEDEDFNEFLEETHPCCQKDNESKARALKLRAALDKVDPSQIAERARKAAFSSGVATLPAGH-GGEDYPALREARASAAXXXXRGSHGVGDGGAVGIGYDGG---------KAXXXXXXXXXXXXXXLDYLLDDPEITRMAQARVEAMHADAARLQKLRSLGFGLHVEVSESEVEATSRGQFRGAGVVLHLYDADSKLGASLDLLLEARAGSYMGTRFVRCRLRPESAAASRMRVRRVPAIACFK 257
            HSH GD TC+H H  G +G  + +EDF+EFLEETHPCCQKD+E+KARALKLR+ALDKVD SQIAERARKAAFSSG+A  PA   GG DYPALREARA+A XXXX  S    DG A G GY  G         +   XXXXXXXXXXXXLDYLLDDPEITRMAQ RVEAMHADA RLQ LR+LGFGLH+EV ES VE  SRGQFRGAGVVLHLYDADS+LGASLDLLLEA+AGSYMGTRFVRCRL PESA A+ MR+RRVPA+AC+K
Sbjct:    6 HSHCGDSTCNHDH--GTSGQVDGEEDFHEFLEETHPCCQKDSEAKARALKLRSALDKVDLSQIAERARKAAFSSGLAGPPASRSGGGDYPALREARAAAXXXXXXDSRN--DGAARGAGYGDGIVEGHNNHSRVDSXXXXXXXXXXXXLDYLLDDPEITRMAQMRVEAMHADATRLQNLRALGFGLHIEVPESGVEEASRGQFRGAGVVLHLYDADSELGASLDLLLEAKAGSYMGTRFVRCRLGPESAVAATMRIRRVPALACYK 267
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8490.17509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHS6_ECTSI1.060e-10174.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21148PHOSDUCIN-RELATEDcoord: 128..257
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 121..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8490contigL-elsbetiae_contig8490:491..4234 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8490.17509.1mRNA_L-elsbetiae_contig8490.17509.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8490 491..4341 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8490.17509.1 ID=prot_L-elsbetiae_contig8490.17509.1|Name=mRNA_L-elsbetiae_contig8490.17509.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=257bp
MSHSHGGDTCSHQHSHGNTGPANEDEDFNEFLEETHPCCQKDNESKARAL
KLRAALDKVDPSQIAERARKAAFSSGVATLPAGHGGEDYPALREARASAA
AAAARGSHGVGDGGAVGIGYDGGKAGSVDDSDASDDDDDLDYLLDDPEIT
RMAQARVEAMHADAARLQKLRSLGFGLHVEVSESEVEATSRGQFRGAGVV
LHLYDADSKLGASLDLLLEARAGSYMGTRFVRCRLRPESAAASRMRVRRV
PAIACFK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf