prot_L-elsbetiae_contig8476.17489.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8476.17489.1
Unique Nameprot_L-elsbetiae_contig8476.17489.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length961
Homology
BLAST of mRNA_L-elsbetiae_contig8476.17489.1 vs. uniprot
Match: D7FIQ7_ECTSI (GRAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIQ7_ECTSI)

HSP 1 Score: 964 bits (2493), Expect = 0.000e+0
Identity = 596/867 (68.74%), Postives = 649/867 (74.86%), Query Frame = 0
Query:    1 MASAGSFVHGSGRSEGERKKSKGEQEIDDFLSXXXXMTS--STGEVNLDGGSSAGGR--DLFLGSASPPTQRQEMG-GGAGEL-----SAIADAFPADWFPD------------QSSGSSAQTPNQQP----EQTQQIPSQDGRHHRQRGEQQPRLAEGHGNDGEPEILGEEPEILGDVEGGDVEGGYDSGAAAAEKLMSAGGRMAAWATSTPASLVGAATAAFRGDARHAAESSSAT-----STADATVVADEPPLDWPGTLDMLGMTETDAEHDGTSTV---PVSELPSIPPPAVREETFPDFVEIRDPRNVSQFPRPDNALVAKVAAGGXXXXXXXXXXXXXXXXXXXGAAVAGQ--GQRQVLPAPLRTVEVYLRPDVTWESVSDVYMAVMLSRGLVVRQQTEKTVTAEKSADAPGDWSTVKLTVGVTRDKLRTLVIQFYADSRVSIFAPMLSFAGTMARFSGRAGDELYTALRDALMERRMPLSFLATDAEEVSLDPHYVRDLVSMYAHENVVNLTRYALPLEEFVRQEEERSARLAATLLPQYQANGLEPPRPTRSKPLSAYPLTTRRPPVSSCGVEEAREVMERAREHAHTTTTAGTISSPLQKSADRGEDGSGAVGGAXXXXXXXXXXXXXXXXXXXXXXXAVAEGIRSLIRATWEDVKDWCDEEAEARVRRKDAQVRDRLLAVERHREALVAALRDGAGGSGASGSPVGREFATRFRLMAEEAVLCHCKAVHAKRVGQLYLTCNHLCFHSSVLGFTSQRVLPLLTVASASHSPSVLGMDLVTLVDRGGEEHSFGITAVEAGFPQRFRDLLNQCLVLCKADASRRAAEREGAAAAAGDGEPDEEQILARVQRLAKAKQLR 831
            MASAGSFVHG+G SE   ++SK EQ+I DF+S      S  ST    L GG S+ G+  D+FLGS SPP  +Q  G   AGEL      AIADAFPADW  D             SS +SA T   QP     Q Q                Q R A    N+   E+LGEEP+IL      +V+ GY SGAAAA  LMSAGGRM +WA +TPASLV AAT AFRGDA HA   ++       S A A+  ADE PLDW GTLDM+GM E + +  GTS +   PVSELPS+PPPA RE  FPDFVEIRDPRNVSQFP+PDNALVAK AAGG          X         AA AGQ  GQR VLPAPLRTVEVYLRPDVTWESVSDVYM VMLSRGLVVR QTEK VTAEKSADAPGDW+TVKLTVGVTRDKLRTLVIQFYAD+R    AP+LS AGT+ARFSGR GD+LYTA+R+ L+ER+MPLSFLATDAEEVSLDPHYVRDLV MYAHENVVNLTRYALPLEEFVRQEEER ARL ATLLPQY+A GL PPRPTRSKPLSAYPLTTRRPPVS+CGVEEAREVMERAREH       G  S P QK  D  ++   A GG XXXXXXXXX              +VAEGIRSLIRATWEDVK+WCDEEAEARVRRKDAQVRDRLLAVE HREAL+AALRDGAGGS AS +P GREFA RFR MA+EAVLC CKAVHAKRVGQLYLTCNH+CFHSSVLGFTSQRVLPLLTVA+ SH+ SVLGMDL+TLVDRGG+EHSFGITAVEAGFP+RF DLL QCLVLCKADASRRAA+REGAAA+  + EPDEEQILARVQRLAKAKQLR
Sbjct:    1 MASAGSFVHGTGASEERVRQSKEEQDIADFMSSIDDTASGGSTTTSVLRGGRSSVGKGGDIFLGSLSPPALQQVTGTSAAGELLADDGKAIADAFPADWLNDFEGIGLGVQGKTDSSAASA-TATAQPIHSSPQGQXXXXXXXXXXXXXXXXQHRDATIQNNE-TGEVLGEEPQIL-----DNVDEGYGSGAAAAGMLMSAGGRMVSWAANTPASLVDAATGAFRGDAHHAVSRNAGGDLGNGSAAAASTDADELPLDWQGTLDMVGMAEAETDTKGTSALAVAPVSELPSLPPPAAREGGFPDFVEIRDPRNVSQFPKPDNALVAKAAAGGGGDGQAGQGAXESGEH----AAAAGQERGQRHVLPAPLRTVEVYLRPDVTWESVSDVYMGVMLSRGLVVRHQTEKMVTAEKSADAPGDWATVKLTVGVTRDKLRTLVIQFYADTRKQ--APILSLAGTIARFSGRTGDDLYTAIRNVLVERQMPLSFLATDAEEVSLDPHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEERLARLEATLLPQYRACGLAPPRPTRSKPLSAYPLTTRRPPVSACGVEEAREVMERAREHVR----GGGDSFPPQKGVDVDDENVFASGGXXXXXXXXXXDEGRGAKVGSGS--SVAEGIRSLIRATWEDVKEWCDEEAEARVRRKDAQVRDRLLAVEGHREALIAALRDGAGGSAASSTPAGREFAARFRPMAKEAVLCQCKAVHAKRVGQLYLTCNHVCFHSSVLGFTSQRVLPLLTVATISHASSVLGMDLLTLVDRGGQEHSFGITAVEAGFPERFHDLLKQCLVLCKADASRRAAQREGAAAS--EREPDEEQILARVQRLAKAKQLR 846          
BLAST of mRNA_L-elsbetiae_contig8476.17489.1 vs. uniprot
Match: A0A7S2F8A2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F8A2_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 3.450e-5
Identity = 44/125 (35.20%), Postives = 67/125 (53.60%), Query Frame = 0
Query:  621 LIRATWEDVKDWCDEEAEARVRRKDAQVRDRLLAVERHREALVAALRDGAGGSGASGSPVGREFATRFRLMAEEAVLCHCKAVHAK-----RVGQLYLTCNHLCFHS--SVLGFTSQRVLPLLTV 738
            ++RA W  +   C+EEA AR+ RK   V  RL A+E +R A+V+ L + +  +      V R F  RFR+ A+EA+L  C AV  +     R G++Y+T  HL F     +L   +Q  +P  T+
Sbjct:   69 VVRALWRLLGSKCEEEARARMARKQKVVTQRLQAIEGYRSAVVSKLANRSQQNRTELIGVERAFRGRFRV-ADEALLVDCAAVVTEADGKQRKGRVYVTMGHLWFDDPGGLLTSPTQTPIPFYTI 192          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8476.17489.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIQ7_ECTSI0.000e+068.74GRAM domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2F8A2_9STRA3.450e-535.20Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 827..847
NoneNo IPR availablePANTHERPTHR31535FAMILY NOT NAMEDcoord: 70..678
IPR004182GRAM domainPFAMPF02893GRAMcoord: 683..743
e-value: 2.9E-5
score: 23.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8476contigL-elsbetiae_contig8476:649..6373 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8476.17489.1mRNA_L-elsbetiae_contig8476.17489.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8476 649..6373 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8476.17489.1 ID=prot_L-elsbetiae_contig8476.17489.1|Name=mRNA_L-elsbetiae_contig8476.17489.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=961bp
MASAGSFVHGSGRSEGERKKSKGEQEIDDFLSEIDDMTSSTGEVNLDGGS
SAGGRDLFLGSASPPTQRQEMGGGAGELSAIADAFPADWFPDQSSGSSAQ
TPNQQPEQTQQIPSQDGRHHRQRGEQQPRLAEGHGNDGEPEILGEEPEIL
GDVEGGDVEGGYDSGAAAAEKLMSAGGRMAAWATSTPASLVGAATAAFRG
DARHAAESSSATSTADATVVADEPPLDWPGTLDMLGMTETDAEHDGTSTV
PVSELPSIPPPAVREETFPDFVEIRDPRNVSQFPRPDNALVAKVAAGGGS
GGGADGQRGGGGGDSGSGAAVAGQGQRQVLPAPLRTVEVYLRPDVTWESV
SDVYMAVMLSRGLVVRQQTEKTVTAEKSADAPGDWSTVKLTVGVTRDKLR
TLVIQFYADSRVSIFAPMLSFAGTMARFSGRAGDELYTALRDALMERRMP
LSFLATDAEEVSLDPHYVRDLVSMYAHENVVNLTRYALPLEEFVRQEEER
SARLAATLLPQYQANGLEPPRPTRSKPLSAYPLTTRRPPVSSCGVEEARE
VMERAREHAHTTTTAGTISSPLQKSADRGEDGSGAVGGAGAGAGAGAGGG
GGGGGGAGSGSVAVAEGIRSLIRATWEDVKDWCDEEAEARVRRKDAQVRD
RLLAVERHREALVAALRDGAGGSGASGSPVGREFATRFRLMAEEAVLCHC
KAVHAKRVGQLYLTCNHLCFHSSVLGFTSQRVLPLLTVASASHSPSVLGM
DLVTLVDRGGEEHSFGITAVEAGFPQRFRDLLNQCLVLCKADASRRAAER
EGAAAAAGDGEPDEEQILARVQRLAKAKQLREAREAATAAAAAATAAVAA
AAPAAVPAPAPPLLSPPAGARKVDKEGTVGPDDRGRVSGGGGGVVEGGAG
GAMGMGGDAAVRRGEGSGAGVQGGGGGEAAGRGGGGGGGGKPGSMMAMGI
QAFLQESQKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004182GRAM