mRNA_L-elsbetiae_contig8476.17489.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8476.17489.1 vs. uniprot
Match: D7FIQ7_ECTSI (GRAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIQ7_ECTSI) HSP 1 Score: 964 bits (2493), Expect = 0.000e+0 Identity = 596/867 (68.74%), Postives = 649/867 (74.86%), Query Frame = 1 Query: 1 MASAGSFVHGSGRSEGERKKSKGEQEIDDFLSXXXXMTS--STGEVNLDGGSSAGGR--DLFLGSASPPTQRQEMG-GGAGEL-----SAIADAFPADWFPD------------QSSGSSAQTPNQQP----EQTQQIPSQDGRHHRQRGEQQPRLAEGHGNDGEPEILGEEPEILGDVEGGDVEGGYDSGAAAAEKLMSAGGRMAAWATSTPASLVGAATAAFRGDARHAAESSSAT-----STADATVVADEPPLDWPGTLDMLGMTETDAEHDGTSTV---PVSELPSIPPPAVREETFPDFVEIRDPRNVSQFPRPDNALVAKVAAGGXXXXXXXXXXXXXXXXXXXGAAVAGQ--GQRQVLPAPLRTVEVYLRPDVTWESVSDVYMAVMLSRGLVVRQQTEKTVTAEKSADAPGDWSTVKLTVGVTRDKLRTLVIQFYADSRVSIFAPMLSFAGTMARFSGRAGDELYTALRDALMERRMPLSFLATDAEEVSLDPHYVRDLVSMYAHENVVNLTRYALPLEEFVRQEEERSARLAATLLPQYQANGLEPPRPTRSKPLSAYPLTTRRPPVSSCGVEEAREVMERAREHAHTTTTAGTISSPLQKSADRGEDGSGAVGGAXXXXXXXXXXXXXXXXXXXXXXXAVAEGIRSLIRATWEDVKDWCDEEAEARVRRKDAQVRDRLLAVERHREALVAALRDGAGGSGASGSPVGREFATRFRLMAEEAVLCHCKAVHAKRVGQLYLTCNHLCFHSSVLGFTSQRVLPLLTVASASHSPSVLGMDLVTLVDRGGEEHSFGITAVEAGFPQRFRDLLNQCLVLCKADASRRAAEREGAAAAAGDGEPDEEQILARVQRLAKAKQLR 2493 MASAGSFVHG+G SE ++SK EQ+I DF+S S ST L GG S+ G+ D+FLGS SPP +Q G AGEL AIADAFPADW D SS +SA T QP Q Q Q R A N+ E+LGEEP+IL +V+ GY SGAAAA LMSAGGRM +WA +TPASLV AAT AFRGDA HA ++ S A A+ ADE PLDW GTLDM+GM E + + GTS + PVSELPS+PPPA RE FPDFVEIRDPRNVSQFP+PDNALVAK AAGG X AA AGQ GQR VLPAPLRTVEVYLRPDVTWESVSDVYM VMLSRGLVVR QTEK VTAEKSADAPGDW+TVKLTVGVTRDKLRTLVIQFYAD+R AP+LS AGT+ARFSGR GD+LYTA+R+ L+ER+MPLSFLATDAEEVSLDPHYVRDLV MYAHENVVNLTRYALPLEEFVRQEEER ARL ATLLPQY+A GL PPRPTRSKPLSAYPLTTRRPPVS+CGVEEAREVMERAREH G S P QK D ++ A GG XXXXXXXXX +VAEGIRSLIRATWEDVK+WCDEEAEARVRRKDAQVRDRLLAVE HREAL+AALRDGAGGS AS +P GREFA RFR MA+EAVLC CKAVHAKRVGQLYLTCNH+CFHSSVLGFTSQRVLPLLTVA+ SH+ SVLGMDL+TLVDRGG+EHSFGITAVEAGFP+RF DLL QCLVLCKADASRRAA+REGAAA+ + EPDEEQILARVQRLAKAKQLR Sbjct: 1 MASAGSFVHGTGASEERVRQSKEEQDIADFMSSIDDTASGGSTTTSVLRGGRSSVGKGGDIFLGSLSPPALQQVTGTSAAGELLADDGKAIADAFPADWLNDFEGIGLGVQGKTDSSAASA-TATAQPIHSSPQGQXXXXXXXXXXXXXXXXQHRDATIQNNE-TGEVLGEEPQIL-----DNVDEGYGSGAAAAGMLMSAGGRMVSWAANTPASLVDAATGAFRGDAHHAVSRNAGGDLGNGSAAAASTDADELPLDWQGTLDMVGMAEAETDTKGTSALAVAPVSELPSLPPPAAREGGFPDFVEIRDPRNVSQFPKPDNALVAKAAAGGGGDGQAGQGAXESGEH----AAAAGQERGQRHVLPAPLRTVEVYLRPDVTWESVSDVYMGVMLSRGLVVRHQTEKMVTAEKSADAPGDWATVKLTVGVTRDKLRTLVIQFYADTRKQ--APILSLAGTIARFSGRTGDDLYTAIRNVLVERQMPLSFLATDAEEVSLDPHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEERLARLEATLLPQYRACGLAPPRPTRSKPLSAYPLTTRRPPVSACGVEEAREVMERAREHVR----GGGDSFPPQKGVDVDDENVFASGGXXXXXXXXXXDEGRGAKVGSGS--SVAEGIRSLIRATWEDVKEWCDEEAEARVRRKDAQVRDRLLAVEGHREALIAALRDGAGGSAASSTPAGREFAARFRPMAKEAVLCQCKAVHAKRVGQLYLTCNHVCFHSSVLGFTSQRVLPLLTVATISHASSVLGMDLLTLVDRGGQEHSFGITAVEAGFPERFHDLLKQCLVLCKADASRRAAQREGAAAS--EREPDEEQILARVQRLAKAKQLR 846
BLAST of mRNA_L-elsbetiae_contig8476.17489.1 vs. uniprot
Match: A0A7S2F8A2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F8A2_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 3.450e-5 Identity = 44/125 (35.20%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 1861 LIRATWEDVKDWCDEEAEARVRRKDAQVRDRLLAVERHREALVAALRDGAGGSGASGSPVGREFATRFRLMAEEAVLCHCKAVHAK-----RVGQLYLTCNHLCFHS--SVLGFTSQRVLPLLTV 2214 ++RA W + C+EEA AR+ RK V RL A+E +R A+V+ L + + + V R F RFR+ A+EA+L C AV + R G++Y+T HL F +L +Q +P T+ Sbjct: 69 VVRALWRLLGSKCEEEARARMARKQKVVTQRLQAIEGYRSAVVSKLANRSQQNRTELIGVERAFRGRFRV-ADEALLVDCAAVVTEADGKQRKGRVYVTMGHLWFDDPGGLLTSPTQTPIPFYTI 192 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8476.17489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8476.17489.1 >prot_L-elsbetiae_contig8476.17489.1 ID=prot_L-elsbetiae_contig8476.17489.1|Name=mRNA_L-elsbetiae_contig8476.17489.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=961bp MASAGSFVHGSGRSEGERKKSKGEQEIDDFLSEIDDMTSSTGEVNLDGGSback to top mRNA from alignment at L-elsbetiae_contig8476:649..6373- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8476.17489.1 ID=mRNA_L-elsbetiae_contig8476.17489.1|Name=mRNA_L-elsbetiae_contig8476.17489.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5725bp|location=Sequence derived from alignment at L-elsbetiae_contig8476:649..6373- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8476:649..6373- >mRNA_L-elsbetiae_contig8476.17489.1 ID=mRNA_L-elsbetiae_contig8476.17489.1|Name=mRNA_L-elsbetiae_contig8476.17489.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5766bp|location=Sequence derived from alignment at L-elsbetiae_contig8476:649..6373- (Laminarionema elsbetiae ELsaHSoW15)back to top |