prot_L-elsbetiae_contig8446.17455.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8446.17455.1
Unique Nameprot_L-elsbetiae_contig8446.17455.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length121
Homology
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BLAST of mRNA_L-elsbetiae_contig8446.17455.1 vs. uniprot
Match: D8LCP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP2_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 1.240e-39
Identity = 77/121 (63.64%), Postives = 82/121 (67.77%), Query Frame = 0 
Query:    1 MSQGGLNLRDLLADPSNDSTPVEAMRAIMTRGKEHGWTTSQLFGVFLEAGSKEEHIPFDRFQAGLRLLGLAISQEDAREIFKTFDADNSGTIELSEFIRWCLDIDTMAWKAERIRRTTVGQ 121
            MSQGGL+L+D+L DPSNDSTPVEAMR+IM RGKEHGWTTSQLFGVFLE                                  TFD D SGTIELSEFIRWCLDIDTMAWKAER+RRTT GQ
Sbjct:   88 MSQGGLHLKDILGDPSNDSTPVEAMRSIMVRGKEHGWTTSQLFGVFLE----------------------------------TFDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQ 174
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BLAST of mRNA_L-elsbetiae_contig8446.17455.1 vs. uniprot
Match: D8LSJ9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ9_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 6.140e-12
Identity = 35/106 (33.02%), Postives = 60/106 (56.60%), Query Frame = 0 
Query:   14 DPSNDSTPVEAMRAIMTRGKEHGWTTSQLFGVFLEAGSKEEHIPFDRFQAGLRLLG---LAISQEDAREIFKTFDADNSGTIELSEFIRWCLDIDTMAWKAERIRR 116
            + + D +PVE ++ ++T+ KE G +  +LF  F   G  E  +    F++ LR LG     + + +   +   FD D +GT+EL EF+ +CL I ++ W+AE+ RR
Sbjct:  103 EAAGDVSPVEKLQVLLTKAKERGMSAERLFEHFAPGG--EASVTPLMFESALRKLGQRAFDLDEMELEHLVTVFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARR 206
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BLAST of mRNA_L-elsbetiae_contig8446.17455.1 vs. uniprot
Match: D7G5R3_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R3_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.710e-10
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 0 
Query:   48 EAGSKEEHIPFDRFQAGLRLLGLAISQEDAREIFKTFDADNSGTIELSEFIRWCLDIDTMAWKAERIRRTTVG 120
            EA  ++  I    FQ GL  LG  IS E+  ++F   DA+  G+I+L+EF R+CL+I +M WKAER RR  +G
Sbjct:  289 EAMMRDRLITSASFQHGLATLGFNISTEETAKMFDQLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILG 361
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8446.17455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCP2_ECTSI1.240e-3963.64EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LSJ9_ECTSI6.140e-1233.02EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7G5R3_ECTSI1.710e-1045.21EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 76..104
e-value: 6.2E-4
score: 29.1
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 59..98
e-value: 1.4E-7
score: 31.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 72..107
score: 12.923
NoneNo IPR availableGENE3D1.10.238.10coord: 22..109
e-value: 7.3E-11
score: 44.3
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 85..97
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 38..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8446contigL-elsbetiae_contig8446:5003..8450 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8446.17455.1mRNA_L-elsbetiae_contig8446.17455.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8446 4985..8450 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8446.17455.1 ID=prot_L-elsbetiae_contig8446.17455.1|Name=mRNA_L-elsbetiae_contig8446.17455.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp
MSQGGLNLRDLLADPSNDSTPVEAMRAIMTRGKEHGWTTSQLFGVFLEAG
SKEEHIPFDRFQAGLRLLGLAISQEDAREIFKTFDADNSGTIELSEFIRW
CLDIDTMAWKAERIRRTTVGQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair