prot_L-elsbetiae_contig8444.17454.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8444.17454.1
Unique Nameprot_L-elsbetiae_contig8444.17454.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length117
Homology
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BLAST of mRNA_L-elsbetiae_contig8444.17454.1 vs. uniprot
Match: A0A6H5KFU5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU5_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 3.890e-13
Identity = 59/93 (63.44%), Postives = 68/93 (73.12%), Query Frame = 0 
Query:    1 MLGMLQATFQRVRHSCWQTGARLCDPDNPDNSGCGCXXXXXXXXXXXXXXXXXXXTSINS-----CGSRRAGLCCSWLSSLLFGWDWIPLPTS 88
            MLGM+Q+ F R RH+C +TGARLC  ++  + G G XXXXXXXXXXXXXXXXXXX          C SRRAG CCSWLSSLL GWDW+P+ TS
Sbjct:    1 MLGMIQSVFARTRHACRRTGARLCGRNSECDDGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRSRRAGPCCSWLSSLLLGWDWLPIATS 93
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8444.17454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KFU5_9PHAE3.890e-1363.44RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8444contigL-elsbetiae_contig8444:3389..8174 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8444.17454.1mRNA_L-elsbetiae_contig8444.17454.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8444 3389..8174 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8444.17454.1 ID=prot_L-elsbetiae_contig8444.17454.1|Name=mRNA_L-elsbetiae_contig8444.17454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=117bp
MLGMLQATFQRVRHSCWQTGARLCDPDNPDNSGCGCCCGRSSANGGGSGG
GGGGTTSINSCGSRRAGLCCSWLSSLLFGWDWIPLPTSEGTAGAGGGGGP
APESHRHGSGSLGVSSR
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