prot_L-elsbetiae_contig844.17448.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig844.17448.1
Unique Nameprot_L-elsbetiae_contig844.17448.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length960
Homology
BLAST of mRNA_L-elsbetiae_contig844.17448.1 vs. uniprot
Match: D8LT81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT81_ECTSI)

HSP 1 Score: 610 bits (1572), Expect = 2.430e-194
Identity = 438/785 (55.80%), Postives = 495/785 (63.06%), Query Frame = 0
Query:  216 PPPEAXXXXXPRPRVVTSKYKGLDLIAQADLAERRAREREEARLRAGYPLVALAKERQAVADLRAALTKAVCAVLELCQQQPQAETLTSTGDGDGSATMSGLPE----GNTWWEGDDPRVKATRGPPSTLVQMVCSGEDANVRCGTSEYRLSTG-TAASRCSTAVGYGGSSVLG-----GKAAADRRNISNARTKSKVAAGGRNFP------------QSP------SPSRE--GAEPGPGRS-KLQDIAKTVAESGTMARTLLSGLLATGAGGSGAGPELSSWTRPPPTAIVTPPTNPREALSVARAATADLKSFSNEIKVDVGADG----ETTGCQIP---PHGAPGNNYGSGTSWRAQTAAFTAGAGAPIHENRGETEEVDTTASTRIANALRGDILWAESLPDFVRKAMETQEGDFGQQVALKEREIVLLTETQQELKRDLRTFKADYVSADAEDVIRALRKRQRRLNNQVRYLERQLEFAQQSSEVEGGAIEVLEGILRKRDTDKQLCHSLGLKSLEIGLKIRMLETDAGGKTVEVSRMSRKEQRAVTHLKGRLVKERGITDARKKTVAAELERSLPHGMRAFERVSRTIQRLCNGYTSLPGLLEWGRITAARLESTTAA-GSRCGLGGEADTSDNNTRGILHASCGSGGVGAARDTADVVPLTRGATAAPRAGGGVNHDRRTDGARRPGVQQPGSAAGVGSMGNHRASSTAYLGSPGFRPTDHRFGGGIWASSV-ATASIASG--SASTASLPGRLSSTNAPSRDTPAAQKESFFLPKK 958
            PP        P+PR +  K KGLDLIAQADLAER  REREEARLRAGYPL +LA ERQAVADLRAALTK VC VLELCQ QP+                         G +WWE  DPR KA RGPPSTLVQMVCSGEDA VRC TSEY+LSTG  AASRCSTAV Y G  +       G++  D    SN   K   A+G R  P            Q+P      + +RE  G+    G S K +D+AKTV+ESGTMART+LSG   T +     G  L   T  PP     PPTNPREALS ARAATA ++SFS  IKVDVG  G    E    ++P     GA             QTAA T   G       G    VDT+AS RI NALR D LWAESLPDF+ K ME Q+G FG+QVALKEREIV+LTE Q+ELKRDLR FKADY SADAEDVIRALRKRQR LN+QVRYLERQLE AQQSS VEGGAIEVLEG+LR+RDTDKQL H LGLKSLEIGLKI +LETDAG KTVEVSRM +KEQ+AV HLKGRLVKERGI DAR+KTV AELERSLPHGMRAFERVSRTIQRLCNGYTSLPGL+EWGR+TAARLE+TT A G R GLGG+              S G    G A  TA+  P   G             DRR+   R    Q P S AG+    +  A S+A+    G       F  G  AS+  A +S+ SG  +ASTASLPGR  +T  PS  + + ++ + + PKK
Sbjct:  628 PPQPKHPPTTPQPRAI-KKAKGLDLIAQADLAERLEREREEARLRAGYPLASLALERQAVADLRAALTKTVCVVLELCQHQPEPXXXXXXXXXXXXXXXXXXXXXXXGGPSWWE-RDPRAKAARGPPSTLVQMVCSGEDAGVRCATSEYKLSTGMAAASRCSTAVSYCGGGLSNVIMDDGRSNGDTAAASNHNDKPAAASGQRFEPPPLLLMPQPQXXQTPLEAEATTETRETSGSTTSSGSSSKFRDMAKTVSESGTMARTILSGF--TKSQRKPKGELLVPPTEEPPV-FQGPPTNPREALSAARAATAGVRSFSAGIKVDVGGRGNGGTEAEAGRMPWASGGGAXXXXXXXXXXXXXQTAAPT---GXXXXXXSGGAGVVDTSASARIVNALREDTLWAESLPDFISKTMEAQKGGFGRQVALKEREIVILTEEQRELKRDLRNFKADYYSADAEDVIRALRKRQRGLNDQVRYLERQLELAQQSSHVEGGAIEVLEGLLRQRDTDKQLVHGLGLKSLEIGLKIGLLETDAGSKTVEVSRMGQKEQQAVAHLKGRLVKERGIVDARRKTVEAELERSLPHGMRAFERVSRTIQRLCNGYTSLPGLVEWGRLTAARLETTTTAVGDRRGLGGD-------------GSWGGRVDGTAIATANHRPAYGGXXXXX-----XRRDRRSVNDRVAEGQGPWSVAGLCDSRDFAAPSSAHFDGAGSLSERGVFDFGARASATTAASSLWSGPSTASTASLPGRPRNTMFPS-SSHSTKETTHYFPKK 1385          
BLAST of mRNA_L-elsbetiae_contig844.17448.1 vs. uniprot
Match: A0A6H5KEZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ1_9PHAE)

HSP 1 Score: 590 bits (1522), Expect = 1.950e-193
Identity = 388/648 (59.88%), Postives = 434/648 (66.98%), Query Frame = 0
Query:  226 PRPRVVTSKYKGLDLIAQADLAERRAREREEARLRAGYPLVALAKERQAVADLRAALTKAVCAVLELCQQQPQAETLTSTGD-----GDGSATMSGLPEGNTWWEGDDPRVKATRGPPSTLVQMVCSGEDANVRCGTSEYRLSTGTAA-SRCSTAVGYGGSSVLG-----GKAAADRRNISNARTKSKVAAGGRNFPQ------SPSPSREGAEPGPG---------------RSKLQDIAKTVAESGTMARTLLSGLLATGAGGSGAGPELSSWTRPPPTAIVTPPTNPREALSVARAATADLKSFSNEIKVDVGADG----ETTGCQIP---PHGAPGNNYGSGTSWRAQTAAFTAGAGAPIHENRGETEEVDTTASTRIANALRGDILWAESLPDFVRKAMETQEGDFGQQVALKEREIVLLTETQQELKRDLRTFKADYVSADAEDVIRALRKRQRRLNNQVRYLERQLEFAQQSSEVEGGAIEVLEGILRKRDTDKQLCHSLGLKSLEIGLKIRMLETDAGGKTVEV----------------------SRMSRKEQRAVTHLKGRLVKERGITDARKKTVAAELERSLPHGMRAFERVSRTIQRLCNGYTSLPGLLEWGRITAARLESTTAA-GSRCGLGGE 811
            P+PR +  K KGLDLIAQADLAERR REREEARLRAGYPL +LA ERQAVADLR ALTK VC VLELCQ QP++             G+ ++  +G P   +WWE  DPR KA RGPPSTLVQMVCSGEDA+VRC TSEY+LSTGTAA SRCSTAV Y G  +       G++  D    SN   K   A G R  P        P P +   E G                 RSK +++A TVAESGTMART+LSG   T       G  L   T   P     PPTNPREALS ARAAT  ++SFS  IKVDV   G    E    ++P     GA      SG+ W AQTAA T GA      + G    VD +AS RI NALR D LWA+SLP+F+RK ME Q+G F +QVALKEREIV+LTE Q++LKRDLR  KADY SAD EDVIRALRKRQR LN QVRYLERQLE AQQSS VEGGAIEVLEG+L +RDTDKQL H LGLKSLEIGLKI +LETDAGGKTVEV                      SRM +KEQ+AV HLKGRLVKERGI DAR+KTV AELERSLPHGMRAFERVSRTIQRLCNGYTSLPGL+EWGR+TAARL++TT A G R GLGG+
Sbjct:   35 PQPRAI-KKAKGLDLIAQADLAERREREREEARLRAGYPLASLALERQAVADLREALTKTVCVVLELCQHQPESPAAXXXXXXXXXAGEEASPTTGRP---SWWE-RDPRAKAARGPPSTLVQMVCSGEDADVRCATSEYKLSTGTAAASRCSTAVSYCGGGLSNVIMDDGRSNGDTAAASNHNDKPAAAVGQRFEPPPLLLVPQPQPQQIPLEAGATKETSEISGCTTSSGTRSKFREMATTVAESGTMARTILSGF--TNPRQKPKGELLIPPTAESPV-FQGPPTNPREALSAARAATLRVRSFSAGIKVDVSGRGHGGTEEEAGRMPWASGGGAXXXXXXSGSGWGAQTAAPTGGASTG---DGGGAGVVDMSASARIVNALREDTLWAKSLPEFIRKTMEAQKGGFDRQVALKEREIVILTEEQRDLKRDLRNVKADYYSADTEDVIRALRKRQRGLNEQVRYLERQLELAQQSSHVEGGAIEVLEGLLHQRDTDKQLVHGLGLKSLEIGLKIGLLETDAGGKTVEVGGPFERRQWRHAETIRFSRRFVSRMGQKEQQAVAHLKGRLVKERGIVDARRKTVEAELERSLPHGMRAFERVSRTIQRLCNGYTSLPGLVEWGRLTAARLDTTTTAVGDRRGLGGD 671          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig844.17448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LT81_ECTSI2.430e-19455.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEZ1_9PHAE1.950e-19359.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 631..665
NoneNo IPR availableCOILSCoilCoilcoord: 18..55
NoneNo IPR availablePANTHERPTHR19331:SF400coord: 127..496
NoneNo IPR availablePANTHERPTHR19331LYSYL OXIDASE-RELATEDcoord: 127..496

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig844contigL-elsbetiae_contig844:6120..11798 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig844.17448.1mRNA_L-elsbetiae_contig844.17448.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig844 6094..11798 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig844.17448.1 ID=prot_L-elsbetiae_contig844.17448.1|Name=mRNA_L-elsbetiae_contig844.17448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=960bp
MPSPAQDDAAEEARRQLQVQLTMSIATLRRAKEELREEKQRSERAENQLR
QYQLQMLNAPEEKTSSQKQVQPVPTATPTPAAPPPKQVQAVPTSPKKVQP
APIATPTPAAPSPKQAQAVPTSPKKMQPTRTATPTLTTTPTPTATPTPTA
TPSPRQAQPVPTSPKKVQAVPTSPEKVQPAPTATPTPAAPVPPAPISTMP
PPEMPPPQLQETHKPPPPEAKHQPPPRPRVVTSKYKGLDLIAQADLAERR
AREREEARLRAGYPLVALAKERQAVADLRAALTKAVCAVLELCQQQPQAE
TLTSTGDGDGSATMSGLPEGNTWWEGDDPRVKATRGPPSTLVQMVCSGED
ANVRCGTSEYRLSTGTAASRCSTAVGYGGSSVLGGKAAADRRNISNARTK
SKVAAGGRNFPQSPSPSREGAEPGPGRSKLQDIAKTVAESGTMARTLLSG
LLATGAGGSGAGPELSSWTRPPPTAIVTPPTNPREALSVARAATADLKSF
SNEIKVDVGADGETTGCQIPPHGAPGNNYGSGTSWRAQTAAFTAGAGAPI
HENRGETEEVDTTASTRIANALRGDILWAESLPDFVRKAMETQEGDFGQQ
VALKEREIVLLTETQQELKRDLRTFKADYVSADAEDVIRALRKRQRRLNN
QVRYLERQLEFAQQSSEVEGGAIEVLEGILRKRDTDKQLCHSLGLKSLEI
GLKIRMLETDAGGKTVEVSRMSRKEQRAVTHLKGRLVKERGITDARKKTV
AAELERSLPHGMRAFERVSRTIQRLCNGYTSLPGLLEWGRITAARLESTT
AAGSRCGLGGEADTSDNNTRGILHASCGSGGVGAARDTADVVPLTRGATA
APRAGGGVNHDRRTDGARRPGVQQPGSAAGVGSMGNHRASSTAYLGSPGF
RPTDHRFGGGIWASSVATASIASGSASTASLPGRLSSTNAPSRDTPAAQK
ESFFLPKKAM
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