prot_L-elsbetiae_contig843.17439.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig843.17439.1
Unique Nameprot_L-elsbetiae_contig843.17439.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length87
Homology
BLAST of mRNA_L-elsbetiae_contig843.17439.1 vs. uniprot
Match: D8LMF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF5_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 4.550e-51
Identity = 81/84 (96.43%), Postives = 82/84 (97.62%), Query Frame = 0
Query:    1 VPRLNTVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPIERKALGIVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVT 84
            VPRLN VFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHP+ERKALGIV GEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVT
Sbjct:   46 VPRLNMVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPLERKALGIVQGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVT 129          
BLAST of mRNA_L-elsbetiae_contig843.17439.1 vs. uniprot
Match: A0A835ZAA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA6_9STRA)

HSP 1 Score: 126 bits (317), Expect = 2.440e-34
Identity = 58/83 (69.88%), Postives = 69/83 (83.13%), Query Frame = 0
Query:    1 VPRLNTVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPIERKALGIVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGV 83
            +P+LN V LTG LGQDP  +YFD G+ V+ LSLAVKREYH +ERKA+GI YGEEETDWFQLE+W+R+AEYA KV  KG RVG+
Sbjct:   84 IPKLNAVLLTGRLGQDPVARYFDDGKCVVQLSLAVKREYHALERKAMGIRYGEEETDWFQLELWSREAEYAMKVAAKGLRVGI 166          
BLAST of mRNA_L-elsbetiae_contig843.17439.1 vs. uniprot
Match: A0A7R9W4H7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W4H7_9STRA)

HSP 1 Score: 124 bits (310), Expect = 3.330e-33
Identity = 55/86 (63.95%), Postives = 69/86 (80.23%), Query Frame = 0
Query:    1 VPRLNTVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPIERKALGIVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTVS 86
            +PRLN V L+G +G DP+P+YFD G+VVLNLSLAV+R+YHP+ERK   I YGEEETDWF LE+W RDAE+A+    KG R+G+T S
Sbjct:  104 IPRLNIVTLSGRVGNDPEPRYFDDGKVVLNLSLAVQRKYHPLERKVRNIKYGEEETDWFPLELWGRDAEFASNFVDKGARIGITGS 189          
BLAST of mRNA_L-elsbetiae_contig843.17439.1 vs. uniprot
Match: A0A7S1YYF7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YYF7_TRICV)

HSP 1 Score: 123 bits (309), Expect = 3.610e-33
Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = 0
Query:    1 VPRLNTVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPIERKALGIVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTVS 86
            +PRLN V L+G +G DP+P+YFD G+VVLNLSLA KR+YHP+ERK   I YGEEETDW+ LEMW RDAE+ +K   KG R+G+T S
Sbjct:  107 IPRLNIVTLSGRVGNDPEPRYFDDGKVVLNLSLACKRKYHPLERKVRNIKYGEEETDWWPLEMWGRDAEFVSKYVNKGARIGITGS 192          
BLAST of mRNA_L-elsbetiae_contig843.17439.1 vs. uniprot
Match: A0A7S4R517_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R517_9STRA)

HSP 1 Score: 120 bits (300), Expect = 5.080e-32
Identity = 52/86 (60.47%), Postives = 68/86 (79.07%), Query Frame = 0
Query:    1 VPRLNTVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPIERKALGIVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTVS 86
            +P+LN V L+G +G  P+P+YFD G+VVLN+ LAVKR+YHP+ERK   I YG+EETDWF LE+W RDAE+AA+   KG R+G+T S
Sbjct:  113 IPKLNVVTLSGRVGNVPEPRYFDDGKVVLNMGLAVKRKYHPLERKVKNIQYGQEETDWFNLELWGRDAEFAARFVDKGSRIGITGS 198          
BLAST of mRNA_L-elsbetiae_contig843.17439.1 vs. uniprot
Match: A0A7S1ZHN3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZHN3_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.760e-31
Identity = 52/86 (60.47%), Postives = 68/86 (79.07%), Query Frame = 0
Query:    1 VPRLNTVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPIERKALGIVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTVS 86
            +P+LN V L+G +G  P+P+YFD G+VVLN+ LAVKR+YHP+ERK   I YG+EETDWF LE+W RDAE+AA+   KG R+G+T S
Sbjct:  113 IPKLNVVTLSGRVGNVPEPRYFDDGKVVLNMGLAVKRKYHPLERKVKNIQYGQEETDWFNLELWGRDAEFAARFVDKGSRIGITGS 198          
BLAST of mRNA_L-elsbetiae_contig843.17439.1 vs. uniprot
Match: B8C9K7_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9K7_THAPS)

HSP 1 Score: 115 bits (287), Expect = 3.350e-31
Identity = 53/86 (61.63%), Postives = 63/86 (73.26%), Query Frame = 0
Query:    1 VPRLNTVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPIERKALGIVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTVS 86
            +P+LN V L G +G  P PKYFD G+VVLNLS+AVKR+YHP+ERK   I  GEEETDWF LE W RDAEY     +KG R+G+T S
Sbjct:   10 LPKLNVVTLVGRVGGTPDPKYFDDGKVVLNLSVAVKRKYHPLERKVRNIRSGEEETDWFPLEFWGRDAEYVTNYVEKGARIGITGS 95          
BLAST of mRNA_L-elsbetiae_contig843.17439.1 vs. uniprot
Match: K0SQT6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQT6_THAOC)

HSP 1 Score: 117 bits (293), Expect = 5.890e-31
Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 0
Query:    1 VPRLNTVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPIERKALGIVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTVS 86
            +P+LN+V L G +G +P+PKYFD G+VVLNLSLA KR+YHP+ERK   I  GEEETDWF LE+W RDAEY A    KG R+G+T S
Sbjct:   77 LPKLNSVTLVGRVGNEPEPKYFDDGKVVLNLSLACKRKYHPLERKVREIKSGEEETDWFALEIWGRDAEYVANYVDKGARMGITGS 162          
BLAST of mRNA_L-elsbetiae_contig843.17439.1 vs. uniprot
Match: A0A7S2SIA7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SIA7_9STRA)

HSP 1 Score: 118 bits (295), Expect = 7.210e-31
Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 0
Query:    1 VPRLNTVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPIERKALGIVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVT 84
            +PR+N+V L G +GQDP PKY D G+VVLNLSLAVKR+YHP+ER    I  GEEETDWF LE+W RDAEYA+K   KG R+ VT
Sbjct:  107 IPRVNSVTLVGRVGQDPDPKYLDDGKVVLNLSLAVKRKYHPLERNVRNIKSGEEETDWFPLEIWGRDAEYASKYVDKGSRMMVT 190          
BLAST of mRNA_L-elsbetiae_contig843.17439.1 vs. uniprot
Match: A0A7S2USN2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2USN2_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.140e-29
Identity = 54/87 (62.07%), Postives = 68/87 (78.16%), Query Frame = 0
Query:    1 VPRLNTVFLTGYLGQDP-KPKYFDSGRVVLNLSLAVKREYHPIERKALGIVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTVS 86
            +P+ N V L+G +G    +PKYFD G+VVL+LSLAVKR+YHP+ER+A  I  G+EETDWF LE+W RDAEYAAK  +KG R+GVT S
Sbjct:   40 IPKFNVVTLSGRVGNPQLEPKYFDDGKVVLSLSLAVKRKYHPLERRAYNIKSGDEETDWFALEIWGRDAEYAAKYVEKGSRIGVTGS 126          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig843.17439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMF5_ECTSI4.550e-5196.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAA6_9STRA2.440e-3469.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9W4H7_9STRA3.330e-3363.95Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1YYF7_TRICV3.610e-3363.95Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S4R517_9STRA5.080e-3260.47Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1ZHN3_9STRA1.760e-3160.47Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
B8C9K7_THAPS3.350e-3161.63Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
K0SQT6_THAOC5.890e-3162.79Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2SIA7_9STRA7.210e-3165.48Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2USN2_9STRA1.140e-2962.07Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePIRSFPIRSF002070SSBcoord: 2..84
e-value: 4.2E-14
score: 50.9
NoneNo IPR availableGENE3D2.40.50.140coord: 2..86
e-value: 1.2E-18
score: 69.0
NoneNo IPR availablePANTHERPTHR10302:SF10SINGLE-STRANDED DNA-BINDING PROTEINcoord: 4..83
IPR000424Primosome PriB/single-strand DNA-bindingPFAMPF00436SSBcoord: 4..84
e-value: 1.2E-15
score: 57.4
IPR000424Primosome PriB/single-strand DNA-bindingPROSITEPS50935SSBcoord: 4..86
score: 16.154
IPR011344Single-stranded DNA-binding proteinTIGRFAMTIGR00621TIGR00621coord: 4..83
e-value: 5.8E-16
score: 57.2
IPR011344Single-stranded DNA-binding proteinPANTHERPTHR10302SINGLE-STRANDED DNA-BINDING PROTEINcoord: 4..83
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 4..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig843contigL-elsbetiae_contig843:2196..2875 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig843.17439.1mRNA_L-elsbetiae_contig843.17439.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig843 2196..2875 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig843.17439.1 ID=prot_L-elsbetiae_contig843.17439.1|Name=mRNA_L-elsbetiae_contig843.17439.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=87bp
VPRLNTVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPIERKALGIV
YGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000424Primosome_PriB/ssb
IPR011344ssDNA-bd
IPR012340NA-bd_OB-fold