prot_L-elsbetiae_contig8416.17428.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8416.17428.1
Unique Nameprot_L-elsbetiae_contig8416.17428.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length249
Homology
BLAST of mRNA_L-elsbetiae_contig8416.17428.1 vs. uniprot
Match: D7FRL4_ECTSI (U6 snRNA phosphodiesterase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL4_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 1.100e-73
Identity = 121/158 (76.58%), Postives = 135/158 (85.44%), Query Frame = 0
Query:    1 MAEASVAHFREKLADAWRERHG-GQVGKGGKKRGRDGRRYPEKIRATSTGKTDPPEVVINDMDPAGQQHLSLSKTTVLRAHQIEPFVEGLKEAVKSSRSFIASVVPGYDVLVNEDKSRSFVCLRVRGGRQMILKLIAKVDPLMRRFKQPEYYEDPVVH 157
            MAEASV+HFR++LA AWRE HG  + GKGGKKR RDGR+   +  A+S GK DPPEVV+NDMDP+G+QHLSLSKTT LRAHQI PFV GLKEAVKSSRSF AS V GYDVLVNEDK+RSFVCLRVRGGRQM+L LIAKVDPLMRRFKQ EYYE  ++H
Sbjct:  101 MAEASVSHFRQRLATAWREGHGRAEGGKGGKKRTRDGRQRSNQASASSAGKLDPPEVVMNDMDPSGRQHLSLSKTTALRAHQINPFVRGLKEAVKSSRSFTASFVSGYDVLVNEDKTRSFVCLRVRGGRQMVLSLIAKVDPLMRRFKQSEYYEVIIMH 258          
BLAST of mRNA_L-elsbetiae_contig8416.17428.1 vs. uniprot
Match: A0A6H5K6W9_9PHAE (U6 snRNA phosphodiesterase 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W9_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 4.010e-66
Identity = 139/266 (52.26%), Postives = 161/266 (60.53%), Query Frame = 0
Query:    1 MAEASVAHFREKLADAWRERHG-GQVGKGGKKRGRDGRRYPEKIRATSTGKTDPPEVVINDMDPAGQQHLSLSKTTVLRAHQIEPFVEGLKEAVKSSRSFIASVVPGYDVLVNEDKSRSFVCLRVRGGRQMILKLIAKVDPLMRRFKQPEYYEDPVVHVSVASVLGDVSTYVGSSSEGAPSPLAARVASGAPKSAGVGEGSLGGDDSVDDSSGEEK-----------------DEEDVPSEICLPVSAVLCKAGTTCFEAPLVAGR 248
            MAEASV+HFR++LA AWR+RHG  + GKGG+KR  DGRR   +  A+S GK DPPEVV+N+MDP+G+QHLSLSKTT LRAHQI+PFV+GLK+AVKSSR                         RVRGGR+M+L LIAKVDPLMRRFKQ  YYE+P+VHVSVASVLGDVSTYV SSS   PS                                                      +DVPSE+CL V  V+CKAGTT FEAPL AGR
Sbjct:   90 MAEASVSHFRQRLAAAWRDRHGRAEGGKGGRKRTSDGRRRSNQASASSAGKLDPPEVVMNNMDPSGRQHLSLSKTTALRAHQIDPFVQGLKDAVKSSR-------------------------RVRGGRKMVLGLIAKVDPLMRRFKQSGYYEEPIVHVSVASVLGDVSTYVSSSSR-VPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISSDDVPSEVCLTVDVVMCKAGTTYFEAPL-AGR 328          
BLAST of mRNA_L-elsbetiae_contig8416.17428.1 vs. uniprot
Match: A0A836CMF3_9STRA (U6 snRNA phosphodiesterase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMF3_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.000e-22
Identity = 52/99 (52.53%), Postives = 68/99 (68.69%), Query Frame = 0
Query:   64 AGQQHLSLSKTTVLRAHQIEPFVEGLKEAVKSSRSFIASVVPGYDVLVNEDKSRSFVCLRVRGGRQMILKLIAKVDPLMRRFKQPEYYEDPVVHVSVAS 162
            AG  HLSLS+   LRAHQ+EPF   L+ A   +R+F   V   Y+VLVN+D++RSFVCL+V GG   IL LI +V+  +  F+Q  YYEDP +H+SVAS
Sbjct:  165 AGGVHLSLSRPFALRAHQLEPFAARLRRAAAGARAFRCEVSGAYEVLVNDDRTRSFVCLKVVGGCAPILALIGRVNEALADFQQQTYYEDPKLHISVAS 263          
BLAST of mRNA_L-elsbetiae_contig8416.17428.1 vs. uniprot
Match: A0A8K1FRB5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRB5_PYTOL)

HSP 1 Score: 94.0 bits (232), Expect = 2.210e-19
Identity = 49/99 (49.49%), Postives = 67/99 (67.68%), Query Frame = 0
Query:   68 HLSLSKTTVLRAHQIEPFVEGLKEAVKSSRSFIASVVPGYDVLVNEDKSRSFVCLRVRGGRQMILKLIAKVDPLMRRFKQPEYYEDPVVHVSVASVLGD 166
            H+SLS+  VL   QIEPFVE L+ A+K  R F A  V    VLVN++++RSF+ L++  G+Q  +K +  VD  M+ F+ P YYEDP+ HVS+AS LGD
Sbjct:  104 HMSLSRPFVLTYEQIEPFVEALRAALKWRRRF-ALTVEEPTVLVNDERTRSFLALQLDAGKQEFVKTVRCVDQCMQDFQLPTYYEDPIPHVSIASALGD 201          
BLAST of mRNA_L-elsbetiae_contig8416.17428.1 vs. uniprot
Match: A0A7S2UZE3_9STRA (U6 snRNA phosphodiesterase 1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZE3_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.490e-19
Identity = 42/101 (41.58%), Postives = 68/101 (67.33%), Query Frame = 0
Query:   66 QQHLSLSKTTVLRAHQIEPFVEGLKEAVKSSRSFIASVVPGYDVLVNEDKSRSFVCLRVRGGRQMILKLIAKVDPLMRRFKQPEYYEDPVVHVSVASVLGD 166
            + H+SLS+  VLR H I+P V  L++A+ S+ SF   V   ++VL N+  +RSFVCL++  G  ++  L+ +VD ++++F+ P YY++   H+SVAS LGD
Sbjct:   69 KHHISLSRPFVLRYHHIDPLVAALQQALSSAPSFTVEVQGEWEVLTNDQGTRSFVCLKIGPGSSLLEDLVDRVDGVLQKFRAPVYYQEKKFHISVASALGD 169          
BLAST of mRNA_L-elsbetiae_contig8416.17428.1 vs. uniprot
Match: A0A5D6XW39_9STRA (U6 snRNA phosphodiesterase 1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW39_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.650e-19
Identity = 50/106 (47.17%), Postives = 66/106 (62.26%), Query Frame = 0
Query:   60 DMDPAGQQHLSLSKTTVLRAHQIEPFVEGLKEAVKSSRSFIASVVPGYDVLVNEDKSRSFVCLRVRGGRQMILKLIAKVDPLMRRFKQPEYYEDPVVHVSVASVLG 165
            D    G  HLSLS+   LR  QI PFV  L+ A+K  R F+ S+  G  VLVN++++RSF+ LRV  G + +L  +  VD  M+ F  P YYEDP+ HVS+AS LG
Sbjct:  108 DSSELGGVHLSLSRPFTLRYEQITPFVLELRAALKWRRRFVLSLA-GATVLVNDERTRSFLALRVADGEREVLATLKCVDACMKHFALPVYYEDPIPHVSIASCLG 212          
BLAST of mRNA_L-elsbetiae_contig8416.17428.1 vs. uniprot
Match: G4YH94_PHYSP (U6 snRNA phosphodiesterase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YH94_PHYSP)

HSP 1 Score: 88.2 bits (217), Expect = 2.390e-17
Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = 0
Query:   65 GQQHLSLSKTTVLRAHQIEPFVEGLKEAVKSSRSFIASVVPGYDVLVNEDKSRSFVCLRVRGGRQMILKLIAKVDPLMRRFKQPEYYEDPVVHVSVASVLGD 166
            G  HLSLS+  +L   QIE FV+ L  A+K  + F  ++  G  VLVN+DK+RSF+ LRV  G Q   +++  VD  +  FKQP YY+DP+ HVS+AS +G+
Sbjct:  119 GGLHLSLSRAFILTYDQIEGFVDSLHTALKWRQRFSVTL-EGALVLVNDDKTRSFLALRVSAGAQQFNQVLRCVDQCLACFKQPTYYQDPIPHVSIASSMGE 219          
BLAST of mRNA_L-elsbetiae_contig8416.17428.1 vs. uniprot
Match: A0A6A4AHD6_9STRA (U6 snRNA phosphodiesterase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4AHD6_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 3.860e-17
Identity = 46/99 (46.46%), Postives = 67/99 (67.68%), Query Frame = 0
Query:   68 HLSLSKTTVLRAHQIEPFVEGLKEAVKSSRSFIASVVPGYDVLVNEDKSRSFVCLRVRGGRQMILKLIAKVDPLMRRFKQPEYYEDPVVHVSVASVLGD 166
            HLSLS+  VL   QIE FV+ L+ A+K  + F  ++  G  VLVN+D++RSF+ LRV  G Q + +++  VD  + RF+ P YYEDP+ HVS+AS +G+
Sbjct:  124 HLSLSRPFVLTFDQIEGFVDSLRSALKWRQRFSVTL-QGALVLVNDDRTRSFLSLRVSEGEQQLKQVLRCVDQCLARFELPTYYEDPIPHVSIASSMGE 221          
BLAST of mRNA_L-elsbetiae_contig8416.17428.1 vs. uniprot
Match: M4B6T3_HYAAE (U6 snRNA phosphodiesterase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B6T3_HYAAE)

HSP 1 Score: 84.3 bits (207), Expect = 9.800e-16
Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 0
Query:   68 HLSLSKTTVLRAHQIEPFVEGLKEAVKSSRSFIASVVPGYDVLVNEDKSRSFVCLRVRGGRQMILKLIAKVDPLMRRFKQPEYYEDPVVHVSVASVLGD 166
            HLSLS+  VL   QI  FV+ L+ A+K  + F  ++     VL+N+DK+RSF+ LRV  G   I+ L+ +VD  + RF QP YY+DP+ HVS+AS +G+
Sbjct:  122 HLSLSRPFVLTYDQISAFVDSLRAALKWRQRFSITLRRSL-VLLNDDKTRSFLALRVVEGGSDIVNLLQRVDQCLARFGQPVYYQDPIPHVSIASSMGE 219          
BLAST of mRNA_L-elsbetiae_contig8416.17428.1 vs. uniprot
Match: A0A225WZS9_9STRA (U6 snRNA phosphodiesterase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZS9_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.070e-15
Identity = 46/107 (42.99%), Postives = 67/107 (62.62%), Query Frame = 0
Query:   60 DMDPAGQQHLSLSKTTVLRAHQIEPFVEGLKEAVKSSRSFIASVVPGYDVLVNEDKSRSFVCLRVRGGRQMILKLIAKVDPLMRRFKQPEYYEDPVVHVSVASVLGD 166
            + D   + HLSLS+  VL   QI  FV+ L+ A+K  + F  ++     VLVN+DK+RSF+ LRV  G +  L+++  VD    RF+ P YY+DP+ HVSVAS +G+
Sbjct:  102 ESDENDRLHLSLSRPFVLTYDQINSFVDSLRAALKWRQRFSVTLKRAL-VLVNDDKTRSFLALRVGEGEEEFLQVLRCVDQCFTRFELPTYYKDPIPHVSVASSVGE 207          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8416.17428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRL4_ECTSI1.100e-7376.58U6 snRNA phosphodiesterase 1 n=1 Tax=Ectocarpus si... [more]
A0A6H5K6W9_9PHAE4.010e-6652.26U6 snRNA phosphodiesterase 1 n=1 Tax=Ectocarpus sp... [more]
A0A836CMF3_9STRA2.000e-2252.53U6 snRNA phosphodiesterase 1 n=1 Tax=Tribonema min... [more]
A0A8K1FRB5_PYTOL2.210e-1949.49Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2UZE3_9STRA2.490e-1941.58U6 snRNA phosphodiesterase 1 n=1 Tax=Fibrocapsa ja... [more]
A0A5D6XW39_9STRA5.650e-1947.17U6 snRNA phosphodiesterase 1 n=1 Tax=Pythium brass... [more]
G4YH94_PHYSP2.390e-1746.08U6 snRNA phosphodiesterase n=1 Tax=Phytophthora so... [more]
A0A6A4AHD6_9STRA3.860e-1746.46U6 snRNA phosphodiesterase n=4 Tax=Phytophthora Ta... [more]
M4B6T3_HYAAE9.800e-1645.45U6 snRNA phosphodiesterase n=1 Tax=Hyaloperonospor... [more]
A0A225WZS9_9STRA1.070e-1542.99U6 snRNA phosphodiesterase n=1 Tax=Phytophthora me... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1140.10coord: 41..185
e-value: 2.5E-34
score: 120.4
IPR027521U6 snRNA phosphodiesterase Usb1PFAMPF09749HVSLcoord: 56..168
e-value: 3.5E-26
score: 92.1
IPR027521U6 snRNA phosphodiesterase Usb1PANTHERPTHR13522UNCHARACTERIZEDcoord: 63..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8416contigL-elsbetiae_contig8416:249..2341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8416.17428.1mRNA_L-elsbetiae_contig8416.17428.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8416 2..2661 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8416.17428.1 ID=prot_L-elsbetiae_contig8416.17428.1|Name=mRNA_L-elsbetiae_contig8416.17428.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp
MAEASVAHFREKLADAWRERHGGQVGKGGKKRGRDGRRYPEKIRATSTGK
TDPPEVVINDMDPAGQQHLSLSKTTVLRAHQIEPFVEGLKEAVKSSRSFI
ASVVPGYDVLVNEDKSRSFVCLRVRGGRQMILKLIAKVDPLMRRFKQPEY
YEDPVVHVSVASVLGDVSTYVGSSSEGAPSPLAARVASGAPKSAGVGEGS
LGGDDSVDDSSGEEKDEEDVPSEICLPVSAVLCKAGTTCFEAPLVAGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027521Usb1