prot_L-elsbetiae_contig841.17425.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig841.17425.1
Unique Nameprot_L-elsbetiae_contig841.17425.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length174
Homology
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BLAST of mRNA_L-elsbetiae_contig841.17425.1 vs. uniprot
Match: D8LNJ8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNJ8_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 3.080e-5
Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 0 
Query:    1 MVDVRSRRCAHNGCTKWPSY-VKTGGKVEYCCDHAEDGTV 39
            M+DV S+RCAH+GC KWPSY +    K E+C +HA  G V
Sbjct:    1 MIDVVSKRCAHSGCNKWPSYGMPPSKKAEFCANHARPGMV 40
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig841.17425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNJ8_ECTSI3.080e-555.00EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig841contigL-elsbetiae_contig841:30691..31212 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig841.17425.1mRNA_L-elsbetiae_contig841.17425.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig841 30642..32109 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig841.17425.1 ID=prot_L-elsbetiae_contig841.17425.1|Name=mRNA_L-elsbetiae_contig841.17425.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=174bp
MVDVRSRRCAHNGCTKWPSYVKTGGKVEYCCDHAEDGTVDVKNKRCAQRD
CRKQPSYGLAGSGKREFCKDHAREAYFTQVMLPKEASPPPAAGVVEAQRQ
LVIAPPPLLMVPAKSAAEAAPVRQQRSKLPRLAAGRPTSEPATPATRARP
PPHSQPQQKLLLQARPLPWGPSW*
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